Ictalurus punctatus (channel catfish): 108254811
Help
Entry
108254811 CDS
T04658
Name
(RefSeq) calmodulin-binding transcription activator 1 isoform X1
KO
K21596
calmodulin-binding transcription activator
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108254811
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Other transcription factors
Others
108254811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
Ank_2
TIG
Ank
AGRB_N
Motif
Other DBs
NCBI-GeneID:
108254811
NCBI-ProteinID:
XP_047005375
Ensembl:
ENSIPUG00000003697
UniProt:
A0A979EER7
LinkDB
All DBs
Position
21:complement(10281777..10533798)
Genome browser
AA seq
1766 aa
AA seq
DB search
MKDEHGHLKIYLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLISFEKHEEWLTTSPKTR
PQNGSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTF
HRRCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELISQLKPM
FYGIKWTCSNGNSSTGFSAEQLVQQILDSHQTKPPPRTHNCLCTGTLGAGSSLHHKCNSA
KHRIISPKVDPRSGGAYSSTHSEVQNSDVSEGKTEHTHGAGKNGRGTGDGPGGSTAREKR
NSKGTKPALLHQNSMEVSSTNQVEVPDTTQSSPVSISSGLNSDPDIADSPVVTGMSHVAS
VMSSLSQSATVFMSEVTGDPVYSMSPTGDPNAHLLGPDTASSSLVLAVAADSHKFAFPGA
VGVGLGDVGSTERLAMLSAASMSEELVLSSSLESGSIKLPETTMNFDPDCFLNNPKQGQT
YGGNGLKTEVSNTSSCSNGGVQCSPPLTDNDYGFNASLVKNIKTEDTSFEQQLAKEGGYQ
VGEVVSGAGSLSSSSGSGSTQSSLALTPTSSLLPSGGGLSPSTTLEQMDFSAIDSKQDYS
STMMSATSYGQAIPSPQLTHQSHSPSFFLQGSPQSTQTQTHQNTSTSAQNSHDSTAYMGL
SVVKTDSTGTNGHHHHHHAHQGQQSTSNCNSSSPAERNGQGGTLQLMQYQNRFTGASKEH
EEVGSLEQPANSERRDAGGQEKETEDLLKAGDHLQHCVGNGADGSGATEHYLQQPESTNL
GAGGAGGTGTGNNSGTLCNGTDGSRATGSPHQQLQPLLQGAGLVQGLFNNMAAHQALATS
GANGGGSMEISLDHFDVSFGNQFSDLINDFISVEGGNGAAIGGQTGNTLYSHQIMAHSGT
EGQVSSGATTQQVAEEGPTHGATGYNSAELCLQPCCSPQSAQSGALGTDTGQLAYMQVEE
VVSAAVAHGTMGMIQNTGRLFVVTDYSPEWSYPEGGVKVLITGPWQEASSDYTCLFDQIT
VPASLIQPGVLRCYCPAHDTGLVTLQVAASSQIISNSVVFEYKARALPALPTSQHDWLSL
DDNQFRMSILERLEQMERRMAEMSGQQQQQGSGGTSESGVTGGGGGGGGGGGGEGRGTAD
QTQLSLGQSQSQGQAGSSFESRVVVVCEKMMNRACWAKSKHLIHSKTFRGMTLLHLAAAQ
GYANLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHTEAAVVLYKWDRR
ALAIPDSLGRLPLATARSRGHTKLAECLENLQREEQQQQTPATNMPFSSSAESSTTEGWM
NVWGSETASGIRGSNVVSSAPSANQDLRRPRSESSSFYNSESQGDGPLTKKHKPNPELHQ
ARSSKPGSTPLGLGEQVHKSKTCPAKATRAGMVDTESGKGDKAQAKLGSACGGGRWSGRQ
TAGRRGPIGGLAKERLANRLRLREASGTGSVSELLVGQEDLENTGDLQLNMMTLAEHIIE
ATPDRIKSENFVATESANLDSVEVNSTMSWLATYLGDAERFLYSKPQACSVGLDSGHAGS
HPESEGPFGKLGLPSPADWSAFLNVSHSKKERDLTQLALSDHEQRELYEAARQVQSTFRK
YKGRPLREQQELAAAVIQRCYKKYKQLTWIALKYALYKKMTLAAILIQSKFRSYYEQKKF
QQSRRAAMLIQQYYRSYKELGRPNSHSHAAAAAALVQHKLRSGLLTKRQDQAARKIMRFL
LRCRHSPLMDHRLFKRGERTEKGQGT
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgaacatggacatttgaaaatctacctgcctaagaagctgctcgaatgtctg
cccaaatgctcctccctgcccaaggagagacatcggtggaacaccaatgaggaaatcgcc
gcttacttgatatcatttgaaaagcatgaagagtggctaacgacgtcccctaaaaccagg
ccgcaaaatgggtctatgatcctttacaacaggaagaaagtgaagtacaggaaagacggc
tactgctggaagaagaggaaagatggcaagaccacgcgggaggatcacatgaagttgaaa
gtgcagggagtcgagtgtctgtatgggtgttacgtccactcctccataatccccaccttc
caccgcaggtgttactggctgctccagaacccagacatcgttctggtccactaccttaat
gttccggccatcgaggattgcgggaagccatgcggtccaatcctgtgctccatcaacaca
gacaaaaaggagtgggccaaatggaccaaggaggagctcatcagccagctcaagcccatg
ttttatggcatcaagtggacttgcagcaacgggaacagcagcaccggcttctcggctgag
cagctggtgcagcagatcctggacagccaccagaccaagccacctccccggactcacaac
tgcctctgcacggggacgctgggtgctggtagcagtctgcatcacaagtgtaacagtgcc
aaacaccgcatcatctccccgaaggttgacccgcgttctggaggtgcttacagcagcact
cactccgaagtccagaacagtgatgtgtctgagggcaagaccgagcacacccatggagca
ggcaaaaatggcaggggaacaggtgacgggccgggtggatcgactgcgcgagaaaagagg
aacagcaaaggaacgaaaccggctctacttcatcagaacagtatggaggtgtcctccacc
aaccaggtggaggtaccagacaccacccagagctctcctgtctccattagcagcgggcta
aactctgatcctgacatagctgacagcccggtggtgacaggtatgagccacgtggcctcc
gtcatgagcagcctctcccagtcggccactgtcttcatgtcagaggtcaccggtgatccc
gtctacagcatgtctcctactggagatcccaatgctcatctcctaggccctgacacagcc
tcaagcagtttggtgctggcagtggctgctgacagtcacaaatttgcttttcctggggct
gtgggtgtgggtttaggagatgtagggtctacagagaggttggcaatgctttctgcagct
agcatgtcagaagagcttgtcctctctagcagcctggagtctgggagcattaagctgcca
gaaaccaccatgaactttgacccagactgcttcctcaacaaccccaagcagggccagaca
tatggaggaaatgggctgaagacagaagtcagcaataccagcagctgcagcaacggagga
gtccaatgttcacctcctctcaccgacaatgattatggcttcaatgcctcactggtcaag
aatattaaaacagaggacacatcatttgagcagcagctggccaaagaaggtggttaccag
gttggagaggtggtcagtggtgcaggtagtctgtccagctcctcgggcagtggctctacc
cagagttccctagctctgacaccaactagctcattgctcccatctgggggtggcctgagc
cctagcaccacactggagcagatggatttcagcgccattgattccaagcaggactactct
tctaccatgatgtctgctacaagctacggtcaagctatacccagcccacagctgacccac
cagagccactctcccagcttcttcctgcagggctcacctcagtccacccagacacaaacc
caccagaacactagcacttctgcacagaactcgcatgactccactgcctacatgggtttg
tcagtagtcaagactgattcaacaggcaccaacgggcatcaccaccaccaccatgcccat
caaggccagcagtctacatccaattgcaacagcagctctccagctgagagaaatgggcaa
ggtggcactctgcaacttatgcagtatcaaaaccgcttcacaggtgccagcaaagaacac
gaggaggttggaagtttggaacaaccagccaactcagaaagacgggacgcaggcgggcaa
gaaaaggagacggaagacttgctgaaggcaggggatcacctgcagcactgtgtgggaaat
ggagcagatggcagcggagctacagagcactacctccaacaaccagagagcaccaacttg
ggagcaggaggagctggaggaacaggaacaggtaataatagtggaaccctgtgtaacggt
acggatggcagcagggcaactggcagtccacatcagcagctacagcctctcctacaggga
gcagggctagtccaggggctctttaacaacatggcagcccaccaggctctggccacaagt
ggagccaatggaggaggatccatggagatcagcctagatcactttgacgtctcttttggg
aatcagttttcagacctcatcaacgatttcatttcagtagaaggaggaaacggtgcagcg
atcggcggacaaacgggcaacacactctacagccatcagataatggcccactcaggcacg
gaagggcaagtgtcatctggagcaaccacccagcaggttgctgaagaaggacccacccat
ggagccacagggtacaactctgcagaactctgcctccagccctgttgcagcccccagtcg
gcccagtccggggcactgggaacagacactgggcagttggcgtacatgcaagtagaggag
gtagtgtctgcagctgtggctcatgggaccatggggatgattcagaacactgggagactg
tttgtggtgacagactactcaccagagtggtcttacccagagggtggagtgaaggtttta
atcacaggaccgtggcaggaggccagcagtgactacacttgcctgttcgatcagatcacg
gttcctgcctcgctcattcagcccggagtgctgcgatgttactgcccagctcacgacaca
ggcctggtgacccttcaggtggcagccagcagccagatcatctccaactcggtggtgttt
gaatataaagcccgcgctctccctgccctgcccacctctcagcacgactggctctccctg
gatgacaaccaattcagaatgtcgatcctggagcgcctggagcagatggagcgcaggatg
gccgagatgtccggccagcagcagcagcaaggcagcggaggaacgtctgaaagtggagta
acgggaggaggaggtggaggaggaggaggaggaggaggagaaggaagaggcactgctgac
caaacacagctctccctgggtcagagtcagagtcagggacaagctggaagctcctttgag
agtcgtgtggtggtggtgtgtgagaagatgatgaaccgcgcctgctgggcaaaatccaag
cacttaatccactccaaaaccttccggggtatgaccctgctccacctggcagctgcccag
ggttacgccaacctgatccagaccctcatcaagtggcgcactaagcatgcagacagcata
gatctggaattagaggtggatcctctgaatgtcgaccatttctcctgcaccccgttgatg
tgggcttgtgctttgggtcacacggaggcagcagtggttttgtataagtgggatcggcgt
gccctggctatccccgattctctcggacgcttaccattggccacagcccgatcccggggc
cacaccaaactggcggagtgtctggaaaatcttcagcgggaggaacagcagcagcagact
cccgctaccaacatgcctttctcctcgtccgcagagagctccaccacagagggctggatg
aatgtttggggaagtgagactgcttctggtataagagggagcaacgtcgttagctctgct
ccaagcgcaaaccaagatttgaggaggcccaggtctgaatcttccagtttctacaacagt
gaaagccaaggtgatggcccattaaccaagaaacacaaacccaatcctgagctccaccaa
gcaaggtcaagcaagcccggttctacccctctcggtctaggagagcaagtccacaagtct
aaaacctgccctgctaaagcaaccagagcaggtatggtggacacagagtcaggaaaagga
gacaaggctcaggcaaagctgggctcagcttgcggaggcgggcgatggagtggcagacag
accgcaggacgcagagggccgattggaggacttgctaaagaaaggttggcaaacaggctg
cggttacgagaagcatctggtacgggatcagtctccgagcttctggtgggccaagaggat
ttggagaacacaggagatctacagttgaatatgatgactctggctgagcacatcattgaa
gcaacgcctgatcgcatcaagagtgaaaacttcgtggccacggagtcagcaaatctggat
agtgtcgaggtcaacagcactatgagctggttagcgacttaccttggagatgcagaaagg
ttcttatacagcaagccgcaggcatgctcagtgggattggacagcggacacgctggcagc
cacccggaatccgaaggccctttcgggaaactcggactcccgtctccagcagactggagc
gcattccttaacgtctctcacagcaaaaaggagcgggatttaacccagctggccctgtct
gaccacgagcagagagagctgtacgaggcagcgcgccaagtccagagcaccttccgcaag
tataaggggcgtccactcagagagcagcaggaactggcagctgctgttattcagcgctgt
tataaaaagtacaaacagctgacatggatagccttgaagtatgcactttataagaagatg
acgctggccgccatcctaatccagagtaaatttcgcagctactacgagcagaagaagttc
cagcaaagtcgtcgggcagccatgctaatccagcaatactatcgcagctacaaggagctg
ggccgacccaactcgcactctcacgccgctgcagctgccgccctcgtgcagcacaaactg
agaagtggtctgctcaccaagaggcaggaccaggccgccagaaaaataatgcgatttcta
ctccgatgtcgccatagccccttgatggaccatagactgttcaaacggggtgagagaact
gaaaagggccaaggaacatga
DBGET
integrated database retrieval system
