KEGG   Ictalurus punctatus (channel catfish): 108254812
Entry
108254812         CDS       T04658                                 
Name
(RefSeq) period circadian protein homolog 3
  KO
K21945  period circadian protein 3
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108254812
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    108254812
SSDB
Motif
Pfam: Per3-like_PAS-A Period_C bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 108254812
NCBI-ProteinID: XP_017305633
Ensembl: ENSIPUG00000003798
UniProt: A0A2D0PH66
LinkDB
Position
21:complement(10238951..10260354)
AA seq 1280 aa
MLSGDNYQDGEVNGSPDPSHVEQGVPVEQADREAGLVGRGCQSISGMASVSGSGSGEDEE
VDKQREGWRMAEECGGEPSGGEQGQEDVEMNGGHDSIGVTRRHLSSANGSPGSAAGSGST
KSEQTEQGRDHTHQEMMQTVQEMKKRLPSEKRSRSKPSTVEALNYALNCVKQVQANSEYY
KLLMCNGLEERKDAMVCSLERLESITSEHTLKNTDTFVVVFSLATGRVVYVSEQASSILN
CKRKFLNSAKFVELLFHQDVNVFYSHTAQPHLPPWNVGTDSAAVHFECARVKSFFCRIRG
GKDRDSEMRYNPFRITPYLLNVQGLGEEEEHPCCLALAERIISGYEAPRIPTDKRIFTTT
HSPGCVFLEVDDRAVPLLGYLPQDLIGTSVLTCLHPEDRTVMLAMHRKILKYAGQPPFEH
SPIRFRCQNGDYVTLDTSWSSFVNPWSRKVAFIIGRHKVRTGPLNEDVFAARSKAELPVM
LEDVKELQAMIYKLFLQPVHTNGSSGYGSLGSNGSHEHYISVASSSDSNGNLWEDSHREP
VTLRPICANVNQMKRGGQQAHPDSRGKVTAAGEVNTETPAPVLQRLEVLRLRSSIEDSHR
KQPHVPSYQQINCVDSIIRYLESCSGPALKRKSESLSIATSSSSTTSEEDKTPAAKLEDR
ANADEATMEASAGLESQVSAGSALTVAHTTAAVVGAPLTDITLSTKAMSVMSVTSQCSYS
STIVHVPQPESEVTALEDAPMGSEPADPAPAPSRPAPGSSAATAPEEFHVVGLTKEVLSA
HTQKEEQEYVDRFRHRILESPYSSYLQQDNSSMAHSNHRGDCVMKPLSTGDWNRSCSGKP
RHKRAKPQASSDSDGSRPGHFLPTTSTAPDNSLSESSRPKPNFFSPVLMPVQPPYYPVPP
HPGPVQPHGLPVAVQPEQTQPVMQVMNPFMSPVMAVIVPYPANYTIYPQPVPGMPGVHSV
TPPGLVPPPPPFPHPSFTSLMDNPPPQTGPSSMPSGALLSSPVSSPWPEEDVDGAQPTAL
FSSSRSSSPLQLNLLQEELPNPNALQSNTGRAESLHEQHPKDNPSDSGNQDAQSTSSVLM
DLLLQEDARSGTGSNASGSGSGESGGSLGSGSGLGSNGTSISHTGSSSNSSKYFASNDSS
DTSRKARKSQDAPERSGFDKRMEDSLWTMIQHTPEPVMMTYQIRPRDQAQVLKEDREKLL
LLQPMQPWFTPGQKEELAEVHSWIHHHNVPEEINTRGCVNCNPAVLEGSDAAAHSPRLPA
PDSSTAQDCPSEDTSPASDT
NT seq 3843 nt   +upstreamnt  +downstreamnt
atgctcagtggagacaactaccaggatggagaagtgaacggttctcctgatccgagccac
gtggaacaaggcgttccggtggagcaggccgacagggaggcaggactggtgggcaggggg
tgccagtcgatctccggaatggcgtcggtatccggatcgggttcaggagaggacgaggag
gtggacaagcagcgagaaggatggcgcatggctgaggagtgcggcggagaaccttccgga
ggagagcaaggtcaggaggacgtggagatgaatggcggtcatgatagcatcggggtaaca
cgacggcatttgtcttcagccaacgggagtcccgggagcgccgcgggatcaggcagcacc
aagagcgagcaaacggagcagggccgagaccacacccaccaagagatgatgcagacggtg
caggagatgaagaagaggctgccatcggagaagaggagccgcagcaaacccagcactgtg
gaggctctgaactacgcccttaactgtgtcaagcaagtacaagcgaacagcgagtactac
aagttactgatgtgcaacggactggaagagagaaaagacgctatggtgtgcagcctggag
cggctggagagcatcacgtctgaacacacactcaaaaatacagacacgtttgtggtggtg
ttttcactggctacgggccgagtggtgtacgtgtcggagcaggcctccagcatcctcaac
tgcaagcgcaagttcctgaactctgccaagtttgtagagctgctgtttcaccaagatgtc
aacgtgttttactctcacactgctcagccgcacctgccgccctggaatgtggggacagac
agcgctgcagtccattttgaatgtgcccgagtcaagtccttcttctgcagaatcagagga
gggaaggaccgtgacagcgagatgcgctacaacccgttccgtatcacgccgtacctgctg
aatgttcagggattgggcgaagaggaggaacatccgtgctgcttggctctggccgagcgc
atcatctcaggatacgaggctccccggattcccacagacaagcgcatcttcaccacaaca
cactctccggggtgtgtgttcttagaagtagacgaccgtgctgtgcctttgcttggctac
ctccctcaggacctgataggcacgtcggtgttgacctgcctccaccctgaggaccgcacc
gtcatgctggccatgcatcgaaaaattctgaaatacgcaggccagccaccattcgaacat
tcccctatccgcttccgctgtcaaaacggagattacgtcacgctggacaccagctggtcc
agctttgtcaacccctggagccgcaaggtggccttcatcatcggcaggcacaaagtccgc
acagggcctctgaatgaagatgtgtttgctgcacggagcaaagcagaacttcccgtcatg
ctggaagatgtcaaagaattgcaggccatgatctacaagctcttccttcagccggtccac
actaacggctcaagcggttacggcagcctgggcagtaacggttcccacgagcactacatc
agcgtggcctcgtccagtgacagcaacgggaacctgtgggaagattcacaccgagagccg
gtgaccctccggccgatatgtgctaatgttaatcaaatgaaacgtggtggtcagcaggcg
catccggactcccggggaaaagtcacggcagcgggggaagttaacacagaaactccagct
cctgtccttcagcgtttagaggtcctgcgtctccgaagctccatcgaggactcgcacagg
aagcagccacacgttccgtcttaccagcagattaactgtgtggacagcatcattagatac
ttggagagctgtagtggccccgccctgaagcggaaaagtgaatccttgtccatcgctacc
tcctcttcttctaccacatccgaggaagacaagacacctgcggccaaactggaggacaga
gcgaatgctgacgaggcaaccatggaagcaagtgccggtctagagagccaggtttcagcc
ggatccgcgttgaccgtagcgcacacaacggcagccgtggttggggctccgctaactgac
atcactctgtccactaaagctatgagtgtgatgtctgtgaccagccagtgcagctatagc
agcaccatcgtgcacgtccctcagcctgaatctgaagtgacggctctggaggatgcgccg
atgggaagcgaaccggccgacccggctcctgcgccatcgcggccggcccccggctcctcc
gctgccacggctccggaggagttccatgtggtggggctgactaaggaggtgctgtccgca
cacacgcagaaggaggagcaagagtacgttgatcgcttcagacatcgcatcctggagagc
ccgtatagctcctacctccagcaggacaacagcagcatggcgcactccaaccacagaggc
gattgtgtcatgaagcccctgagcacgggtgattggaacagatcctgctcaggcaaaccc
agacataagcgcgcaaagcctcaggcctcgtccgacagtgatggctcgcggcctggacac
ttcctgccgacgacctcaaccgctcccgataactccttgtccgaatcgtcccgacccaaa
cccaactttttctcacctgtgctgatgcccgtccagcccccttactatcccgtcccacct
catcctggtcccgttcagccacacggcctgcctgtggcggtgcaacccgaacagacgcag
ccggtcatgcaggtcatgaatcctttcatgtcccccgtcatggccgtcatcgtgccctac
cctgcgaactacaccatctatccgcagccggtaccgggcatgccaggtgtacacagtgta
actccacctggattagtgcctcctcctcctccatttcctcatccttccttcacgtccctg
atggacaatccacctcctcagactggcccgagctcgatgccctctggagcgttgctgtct
tcacccgtctcgtccccgtggccagaagaggacgtggatggtgctcagcccacggcgctc
ttttccagttccaggtccagcagtcctctacagctcaacctgctgcaggaggagctgccc
aatccgaacgccctgcagagcaacacgggccgagctgaaagcctgcacgagcagcacccc
aaggacaatcccagcgattcgggtaatcaagacgcgcagtccacctctagcgtgctgatg
gacctgctgctgcaagaggacgctcgctccgggaccggctccaacgcctcgggtagcgga
tctggagaatcagggggttctctgggttcaggttcaggcctgggctccaacggtacctcc
atcagccatacaggcagcagcagcaacagcagcaagtacttcgccagcaacgactcatca
gacacgtcccgtaaggccaggaagagccaggatgcaccggagcgctccggcttcgacaaa
cgcatggaggactcgctctggaccatgatccagcacacaccggagccggtcatgatgacc
tatcagatccgtcccagggaccaggcacaggttctgaaggaggaccgggagaagctgctc
ctcctgcagcccatgcagccgtggttcactccaggccagaaggaggagctggctgaggta
cattcctggatccaccatcacaatgtaccagaggagataaacacacgaggatgtgtgaac
tgtaaccccgctgttttggaaggaagtgacgcggcggcccattctcccagactgcccgct
ccagacagctcaactgcccaggattgcccctcagaggacaccagccccgcctctgacacc
tga

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