Ictalurus punctatus (channel catfish): 108254813
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Entry
108254813 CDS
T04658
Symbol
ccdc50b
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108254813 (ccdc50b)
Membrane trafficking [BR:
ipu04131
]
Autophagy
Other autophagy associated proteins
Others
108254813 (ccdc50b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
108254813
NCBI-ProteinID:
XP_017305634
Ensembl:
ENSIPUG00000003838
UniProt:
A0A2D0PIE7
LinkDB
All DBs
Position
21:complement(10217377..10236453)
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AA seq
341 aa
AA seq
DB search
MTQIGIDKSHLPHVYDLCQCFSALEDGALAHRLQEQEIEQFYSSNMQKNQAVQNDVRLAR
RLQDEEEERDRLTHQLHQLEEQDCEYARVIQEELRRCDEEAQKREKEDEEMAKRLQEEEE
LKIRHGRAEAGYHEGSGDSPLSRGLGLWEQMMRDAELARRLQEEEDKQPHKRSTETEVDF
RTVQVAQDEELACYMQRQEKKSNRRSRDLLAVERSHDPRCTGRKVPRERLNSEGLHSPVE
EEQSPDQCPLIPTCTTLHTHPFHNIAEELDPTFTSRKRESRISASPPPVSVSAGICLAPR
TPHSVFYDYLPEPSVIPPSRRHADKTGRHKPKEKRESCKQQ
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgacacagattgggattgacaaatctcacctgccgcacgtctacgacctgtgccagtgt
ttctcggcgctggaagacggagctctggctcacagacttcaggagcaggagatcgagcag
ttctacagctccaacatgcagaagaaccaggcggtgcagaatgacgtgcgcttggctcga
aggctgcaggacgaggaggaggagagagaccgtctcacacaccagctccatcagctggag
gagcaggactgcgagtacgcgagggtgattcaggaagaactgcggcgatgtgacgaagaa
gctcagaagagggagaaagaggatgaggagatggccaagcggctgcaggaggaggaagaa
ttgaagattagacatgggagagccgaggctggttaccatgagggcagtggagactcaccg
ctcagccgggggttagggctgtgggagcagatgatgcgggatgctgaactggctcgtaga
ctgcaggaggaggaagacaaacagcctcacaagaggagcaccgaaactgaagtggacttc
cgtacggtacaagtggcccaagatgaggaactcgcttgctacatgcagcgacaagagaag
aagagcaacaggaggtcacgtgacctgcttgctgtggagaggtcacatgatccaagatgc
acaggcagaaaagtgccgagagagagactgaactctgagggcctgcactcacctgtggaa
gaggagcaatccccggatcagtgcccactaatccccacatgcactactctacacacacac
cccttccacaacatcgcagaagaactggacccgacattcaccagcaggaaacgggaaagc
cggatctcggccagcccgccgccagtgtctgtttctgcaggaatctgcctggctcctcgc
acaccgcacagcgttttctacgactaccttccagaaccttccgtcatcccgccgagcaga
cgccacgccgacaaaacaggacgccacaaacccaaagagaaacgggaaagctgtaagcag
cagtaa
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integrated database retrieval system
