KEGG   Ictalurus punctatus (channel catfish): 108254832
Entry
108254832         CDS       T04658                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 11A isoform X1
  KO
K22415  zinc finger CCCH domain-containing protein 11
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ipu03019]
    108254832
Messenger RNA biogenesis [BR:ipu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     108254832
SSDB
Motif
Pfam: zf-CCCH_3 zf_CCCH_4
Other DBs
NCBI-GeneID: 108254832
NCBI-ProteinID: XP_017305661
UniProt: A0A2D0PIE6
LinkDB
Position
21:complement(12424687..12434987)
AA seq 827 aa
MTNMSNKGDDCYFYYYSTCTKGDTCPFRHCEAAMGNETVCSLWQENRCFRNVCKFRHMEI
KKNRKEIPCYWENQAGGCQKFHCAFHHEKPRFIDGHFVAPDKGPVVREEKEEETPKDDHL
SSASANISNTTNPQLRGVIKVETQESVPSPTHPPVVINPVDDEDDEDVDQFSEEGEEASG
VSPKKLLSGSRDEPLNFGIKTLEEIRLGKALKASQTKPGQDDFTSTKQRSNGADTEKETV
PSVTRAAVVTTSECPALEDSGKKKITDRLGKRFDEDMLVEGGLRLKGSLAERLGGFVDST
KDKIDMPPLKVTSPRPVHERLGITPDITAPKSINSEPVPSGEIRIKTLEEIRQEKAAKSQ
IQCKGVRVVNEVPTNALTSTKKVKKPVSGPSVKTFSEILHEKKKLQETKVVLQQGSTSTE
KTEGPKNTGVIKLTAQAAEIRVKTLEEIRKEKAARMQAKPQETTNNAAPSSSDAVPKRQI
LCIGKTGSAINIRSQKVQDSEKGDCSEESTVTNGKSDASIQDVTVKSFEEIMREKRLRKQ
QEQAASAVEPEQAAQKPIPVLCKKKPPVFIRPGITIQANSSIQEVISHQASSPVPSIVPQ
RKSPEMQNKENSLTTSAKKSKSSTSIALPMQVSEMADSLGQQSQEPHWKKTQVVTKMPPS
KAAELKVRPKLNVKPSVMKPAAQLNPGKKRTAADINCSAVAAVKPLNAVPAPDVEPPCKR
TQLSVPSCSLEVEARVQQVSSLAEQCSPEPLSVPQSPIISTPTQARPRRVSVASARGTAP
AGNASTMDDFEDLLDEFTDDRLEDEIELDPGKGEDDLLLELSEMIDS
NT seq 2484 nt   +upstreamnt  +downstreamnt
atgaccaacatgagcaataagggagatgattgctatttctactattattcaacatgcact
aagggtgatacttgcccttttcgacattgtgaggctgccatgggaaatgagaccgtctgc
agtctttggcaggagaaccggtgctttcgcaatgtatgtaaattccgtcacatggaaata
aagaaaaaccgcaaagaaattccttgttactgggaaaatcaggcaggtggatgccaaaag
tttcattgtgcttttcaccacgagaagccacgtttcattgatggccattttgttgcccca
gacaaagggcctgtggtgagggaggagaaagaggaagaaactccaaaggatgaccatctt
tcttctgcttctgccaacatttccaacaccaccaacccacaactcagaggagtcatcaag
gtggagactcaagagagcgtccccagtcccacacacccaccagtagtcattaatcctgtg
gacgatgaggatgatgaagatgtagatcagttttctgaagagggagaggaagcttctggt
gtttctccaaagaaactgctgagcggtagtagagatgagccactgaattttggtatcaaa
acactggaggagatcaggttggggaaagccctgaaggccagtcagacaaaaccaggccaa
gatgatttcacctcaacaaaacagcgtagcaacggagctgacacagagaaggaaaccgtt
ccgtcggttacacgggcagcagttgtcactaccagtgagtgtcctgctttggaggattct
ggaaaaaagaaaattactgacaggcttggaaaaagatttgatgaagacatgcttgtagaa
ggtggtctacggctgaaaggatcccttgctgagcgccttggtggatttgttgactccact
aaggataaaatcgatatgcctcccctgaaagttacatctccgaggccagtgcatgaaaga
cttggaataactcctgacatcactgcacccaagtcaataaacagtgagccagtaccttct
ggtgagatccggatcaaaactcttgaggagattcgtcaggaaaaggctgctaaatctcag
atacagtgcaaaggagttcgagttgtcaacgaggtacccacaaatgcgttaacgtccacc
aaaaaagtaaagaagcctgtcagtgggccaagtgtaaagactttctcagagatcctgcat
gagaaaaagaaactccaggagacaaaggtggtgcttcagcaaggtagtactagcactgag
aaaaccgagggccctaaaaatactggagtgatcaaactgaccgcccaagcagcagagatc
agagtaaagacacttgaagagattcgtaaagaaaaagctgccagaatgcaagcaaagcct
caggaaaccacaaataatgctgcacctagttcaagtgatgcagtgccaaaaagacaaatt
ctttgcattggcaagactggatcagctatcaacatcagatctcaaaaagtgcaagattct
gagaagggggattgcagtgaagagtccactgtaaccaatggaaagagtgacgcctccatt
caggatgtaacagtaaagagctttgaagagatcatgcgagagaaaagacttcgcaagcaa
caggagcaggctgcatctgctgttgagccagagcaagctgcccagaaaccaatcccagtg
ctttgcaaaaagaagcctcctgtgttcatcaggccaggaataaccatccaagcaaattcg
tccatacaagaagtcattagtcatcaggcctcctctcctgtcccttctatagtaccccag
aggaagtctccagaaatgcagaacaaggagaattctcttaccacaagtgctaagaagtcc
aagtcatccacttcaattgcacttcctatgcaagtgtcagagatggcagattctttaggc
caacaatcacaggagccacattggaagaagacgcaagtagtcaccaagatgcccccaagc
aaagcagctgaattaaaagtgaggcccaaactgaatgtaaagccatccgtgatgaagcca
gctgctcagctgaatcctggtaaaaaaaggacagctgcagacattaattgctctgctgtt
gctgcggtgaaacctcttaacgctgtccctgctcctgatgttgaaccaccgtgcaagcgg
actcagttgtctgtaccatcctgcagtttagaagttgaagccagggtgcaacaggtgtcc
tctcttgctgagcagtgttcacctgagcccctttctgttccacaaagccccatcatcagt
actcccacacaagcacggccacgtagggtaagtgtggcttctgcacgtggcactgctcct
gcaggaaatgcctccacaatggacgactttgaggacttgctggatgaatttactgatgac
agactagaggatgagattgagctggacccaggcaaaggcgaggatgacctcttgttggag
ctttcagagatgattgacagctaa

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