Ictalurus punctatus (channel catfish): 108254856
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Entry
108254856 CDS
T04658
Name
(RefSeq) RNA-binding protein 12
KO
K24526
RNA-binding protein 12
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108254856
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108254856
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Med3
Motif
Other DBs
NCBI-GeneID:
108254856
NCBI-ProteinID:
XP_017305716
Ensembl:
ENSIPUG00000014491
UniProt:
A0A2D0PJY9
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Position
21:1124410..1129169
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AA seq
894 aa
AA seq
DB search
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGDHGEAFIVFATDEDARLGMMRT
GGTIKGSKVSLLLSSKTEMQNMIELSRRRFETGNADGASGNSNRSGPPNIGGTERVSLPT
TAQGFSNTTSTTATTAVSVNEPVSNKSAPTFASTTMGNMPPNFNNFSSPNLSMGSTMTTA
MSSLSTVPPPIPPLPTMPTLPPMPPMPGPPPVSTLPPVPAVNPLSSVPPVPPMAHMQHLS
ALPPFNPGVPPPVGPVGGGLAGSGPPLSLGNPNPMFLNPLNPLNPLNLQAHLKSALMNPD
ELYIQVQGLPYSTSEIEIGEFFHGLGVDSIRILRDGLGRSSGRALVKFFTPQDSFEALKR
NTGMIGQRYIEISPASERQWRDTQGSGAEHLKVNSDSEQNRHHRGSITSASPSGRERARS
RSPHKQEFCVYLKGLPYEAENKQIFEFFKNLDIVEDSIYIAYGPNGRATGEGFVEFRNEM
DYKVALGCHMQYMGSRFIQVHPITKKNMFEKIDAIRKRMQGSQGDHKGNLSEGGKGARIC
AHITNIPYNVSKKDVRLFLDGIQLFEDSLKVLVDGNGNGLGQAVVQFKSEEDAHKAERLH
RQKLNGRDAFVHLVTYEQMKEVERNPPPQSKRGQKAQNNSLAHAHAHAQAQAQAQAQAQV
QAQIQAQAQHAFPGMTGEEFSFLRSAVGNLGNGPPFVNPFAAPGNGLAGPPPLPPLGTAL
GDVSLSVPPPIVGGHLPGPVLEPPGFRPGGNSAPPGFVGAPESLRSMPSFDNGSSRKGAS
QNRGGNQSRSAGSQPAFGPSSENPRASITGGVGNPRPTIVKIQNMPFTVTVDEILDFFYG
YKVLPGSVCLQFSEKGLPTGEAMVAFDSHDEAMSAVMDLNDRPIGARKVKITMG
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgtttgcagggcctccctattgtggcgggcaccatggacattcgc
catttcttctccggtctgacaatcccggatggtggcgtgcatattgtagggggtgaccat
ggtgaagcttttatcgtgtttgcaacagatgaagatgcaaggcttggaatgatgcgcaca
gggggaacaatcaaaggttccaaagtgtcactgttacttagcagcaaaactgagatgcaa
aacatgattgagttgagccgcaggcgtttcgaaactggtaatgcagatggtgcttcagga
aatagtaataggtcagggcctcccaatattggaggaactgaaagggttagcttgccaacc
actgcacaaggttttagtaataccacttcaactacagcaaccacagctgtctctgttaat
gagcctgtaagcaacaaaagtgccccaacctttgcttctacaaccatgggtaacatgcct
ccaaactttaataatttcagcagcccaaatcttagcatggggtccaccatgactactgcg
atgtcctccttaagtactgtacctcctccaataccccccttgcctacgatgccaacctta
ccacctatgccacccatgccaggaccaccaccagtgtccacattacccccagtaccagct
gtaaaccctttatcctcagtgccaccagtccctcccatggctcacatgcaacacctctct
gcactccctcctttcaatcctggtgttcccccgccagttggacctgtgggtggtggtctt
gctggctcaggaccacctttgtctctaggaaacccaaatccaatgtttcttaacccacta
aaccctctaaatccgcttaatctccaggcccatttgaaatcagcactgatgaaccctgat
gagttgtacatacaggttcaaggccttccttacagtacatctgaaattgaaattggagaa
tttttccacggattaggggttgactctattcggatactcagagatggtcttggaaggagc
agtggcagggctttggtaaaattttttacaccccaagattcctttgaagctcttaaacga
aacactggtatgataggccaaaggtatatagaaatatctcctgcttcagagaggcaatgg
agagatacgcagggatcaggtgcagagcatcttaaagtaaacagtgactcggagcagaat
cggcatcatcgtggaagtattacctccgcttccccttctggtcgagaacgtgctaggtct
cggtcacctcataaacaggagttctgtgtgtatttaaaggggctcccatatgaagcagaa
aataagcagatatttgaatttttcaaaaacctggacattgttgaagacagcatttacatt
gcatatggacccaatggcagggcaacaggggagggttttgttgagtttagaaatgaaatg
gactataaagttgctcttggatgccacatgcagtacatgggaagtcgatttatacaagtg
caccctatcacaaagaaaaacatgtttgaaaagattgatgcaattcgcaaaagaatgcag
ggttcccagggggatcataaaggtaacttatcagagggtggaaagggtgctcgaatttgt
gctcatataacaaatatcccctataatgtgtcaaagaaagatgtacgcctgtttttggat
ggaattcagttgtttgaagacagcctcaaagtactagttgatggcaatggtaatggcctt
ggccaagccgtggtgcagtttaaatctgaggaggatgcccataaagctgaaagattacat
aggcaaaagttaaatggcagggatgcttttgtccacttggttacatatgagcagatgaag
gaggttgagagaaaccctcctccacagtcaaagcggggacaaaaggctcaaaacaattcc
cttgcacatgcacatgcacatgcccaggcccaggcccaagcccaagctcaggcccaagtg
caagcccaaatccaagctcaagcacaacatgctttccctggaatgaccggggaggagttc
agttttcttcggagtgctgtggggaaccttggtaatggccctccttttgtcaacccattt
gctgccccaggtaatggcttagcaggcccaccacctctacctccattaggtacagccttg
ggtgatgtttcgctttctgttcctccacctattgttggggggcacttaccagggcctgtc
ttggagccccctggtttccgacccggtggcaacagtgcacctcctggttttgttggcgcc
ccagagagcttaaggagcatgccgtcatttgataatggatcttcaaggaaaggcgcaagt
caaaaccgtggtggaaaccaaagtcgttcagcaggctctcaacctgcctttggtccatcc
tctgaaaacccaagggcatcaatcactggtggtgtaggcaacccacggcccaccattgtc
aaaattcaaaatatgccttttactgttacagttgatgaaatattagatttcttctatggt
tataaggtgttgcctggctctgtgtgcctgcaatttagtgagaagggactgcctacagga
gaggcaatggttgcatttgattcccatgatgaagcaatgtctgctgttatggacctaaat
gataggcctattggtgcaagaaaagtaaaaatcactatgggatga
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