Ictalurus punctatus (channel catfish): 108254862
Help
Entry
108254862 CDS
T04658
Symbol
acap3b
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3b isoform X2
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108254862 (acap3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108254862 (acap3b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108254862 (acap3b)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108254862 (acap3b)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108254862 (acap3b)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108254862 (acap3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_5
Ank_3
PH_11
PH_21
TPR_TTI1_N
GFD1
PH_alsin
Motif
Other DBs
NCBI-GeneID:
108254862
NCBI-ProteinID:
XP_017305739
Ensembl:
ENSIPUG00000023923
UniProt:
A0A2D0PIN5
LinkDB
All DBs
Position
21:complement(14842079..14908063)
Genome browser
AA seq
830 aa
AA seq
DB search
MTVDFEECIKDSPRFRANIDEVETDVVDIEAKLDKLVKLCSGMIEAGRAYTNANKLLING
IRDLSHHCKEEMISEFLEKCGVSLQEIVNYHMILFDQAQRSIKQQLHTFVKEDVRKFKET
KKQFDKVREDMEIAQVKNAQAPRNKPHEVEEANGTLIVTRKCFRQLSLDYVLQINVLQAK
KKFEILDSMLSFMHAQYTLFQQGYNLLDELDPYMKKLAAELDQLVIDSAMEKRVMEHQHA
VIQQRTLMQDFTCDDSKVEFNVDAPNGIVMEGYLFKRSTNAFKTWNRRWFSIQNSQLVYQ
KRLKDALTVVVEDLRLCSVKPCEDIERRFCFEVVSPTKSCMLQAESEKLRQAWIQAVQAS
IASAYREITDNYYIERLDRTASPSTSSIDSASEPRERSARGESVLQRVQSLPGNEVCCDC
SQAEPRWASINLGILLCIECSGIHRSLGVHCSKVRSLTLDSWEPELMKLMCELGNTVINQ
IYEGACEERGLKKPGPNSTRQEKEAWIKAKYVERKFLKKMCGLEALVDGGRKSHHWHVKK
CRRNNSVIGAPKTRHKYRHDGGSVSPANLSAAAAAAKFRRESLFCPDELDSLFSYFDTGS
GPRSLSSDSGLGGSTDGSTDILVFGSVVDSVTEEECEDSEESSGEVEVEQETSDMEDVRE
LHPGVLLHKASQARNLPVMAEALAHGADVNSVNEENESKSPLIQAVTGGSLIACEFLLQN
GADVNQKDARGRGPLHHATLLGHTGQVCLFLKRGASQTEVDEDGQDPLSIAVQAANADIV
TLLRLARMNEEMREADGPLGHPGQYPGSSPTEQQYKKCIQEFICLTIDEC
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggattttgaggagtgcattaaagactctccgcggttcagagccaacatcgat
gaggtggagacagatgtggtcgacatcgaggccaaactcgacaagctggtgaagctgtgc
agcgggatgatcgaggctggccgggcgtacaccaacgctaacaagctccttatcaatggc
attcgagacctgtcacaccactgcaaggaggaaatgatctctgagtttctggagaaatgt
ggagtgagccttcaagaaatcgtcaactaccacatgatcctctttgaccaggcccagagg
tccattaagcagcagctgcacacttttgtcaaggaggatgtgcgcaagtttaaggagaca
aagaagcaatttgacaaggtgcgggaggacatggagatagcgcaggtgaaaaacgctcag
gctccccgaaacaagccgcatgaagtggaagaagccaacggcacacttatcgtgacccgg
aagtgtttccgacaactctccctcgactatgtactacagatcaatgttttacaggccaag
aagaagtttgaaatcctagactcgatgctgtccttcatgcatgcacagtacacgctgttc
cagcagggatacaaccttctggacgagctcgacccgtacatgaaaaagcttgctgctgag
ctggatcagctggtgatcgactcggccatggagaagagagtgatggagcaccagcacgcc
gtcatccagcagcggactttgatgcaggacttcacctgtgacgattccaaggtggaattc
aatgtggatgccccgaacgggattgtgatggagggatatctgttcaagcgatctacaaac
gctttcaaaacatggaataggcgctggttctcaatacaaaacagccagcttgtctatcag
aagcggcttaaggatgctcttacggtcgttgtggaggacttgaggctttgttccgtcaaa
ccttgcgaggacatagagcggaggttctgcttcgaagtggtctcacctacaaaaagctgc
atgttgcaggccgagtctgagaagctgcgtcaggcctggattcaggctgtgcaggccagc
atcgcctcagcctacagagagatcacagataactactatatagagcgtttggacagaacg
gcgtctccatccaccagcagcatcgactcggccagtgagccacgggagaggagtgcgaga
ggggagagtgtcctgcagagggtgcagtctctcccaggaaacgaggtgtgctgtgactgc
agtcaggccgagccacgctgggccagcatcaacctgggcatcctgctgtgcatcgagtgt
tccggcatccacaggagtttgggtgtacactgctcaaaggtgcgctctttaacactggac
tcctgggaaccagaattaatgaagttaatgtgtgagcttggaaacacggtaattaatcaa
atctatgagggtgcttgtgaagaaagaggtctgaaaaaacctggacccaacagcacgagg
caagagaaagaggcctggatcaaagctaagtatgtggaaaggaagttcctaaagaaaatg
tgtggcttagaggcgctggtcgatgggggtaggaagtctcatcactggcatgtgaagaag
tgcagacgaaacaacagcgtcatcggagcacccaaaactcgacacaaatacagacatgat
ggaggaagtgtgtcaccagctaacttatccgcagctgctgcagcagccaaattccgcaga
gaatcacttttctgtcccgatgaactggactcacttttctcctactttgacactggctct
gggccccgcagtctcagcagtgacagcggacttggtggcagcacagacggcagcactgac
atcctggtatttggctcggtggtggacagtgtcacagaagaggagtgtgaagactcagag
gaatccagcggggaggtggaggttgaacaagagacatcagacatggaggacgtgcgagag
ctgcatcccggcgtgctgctccataaagcctcacaagcccgaaacctgccggtcatggct
gaggcgttagcgcacggagcagacgtcaactccgttaacgaagagaacgagagcaagagc
cctttaatacaggctgtcacggggggttctttaatagcctgtgaattcctgctgcagaac
ggagctgatgtaaatcagaaagatgcgagaggacggggccctcttcaccatgccacgtta
ttgggtcacacagggcaggtatgtctcttcctgaagcgaggagcgtctcagaccgaggtg
gacgaggacggccaggaccctttgagcattgctgtgcaggcagctaacgcagacatcgtg
actctgttgcggttggcccggatgaacgaggaaatgcgcgaggcagacggccccctcgga
catccaggtcaataccccggcagcagccccactgagcagcagtacaagaagtgcattcag
gagtttatctgccttaccatagatgagtgctag
DBGET
integrated database retrieval system
