Ictalurus punctatus (channel catfish): 108254871
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Entry
108254871 CDS
T04658
Symbol
magi1b
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1b isoform X5
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108254871 (magi1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
MAGI_u5
PDZ_2
MAGI_u1
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
108254871
NCBI-ProteinID:
XP_017305757
Ensembl:
ENSIPUG00000022691
UniProt:
A0A2D0PIM1
LinkDB
All DBs
Position
21:complement(17754701..17903916)
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AA seq
1673 aa
AA seq
DB search
MSKAVQKKNHWSARVSECAVRRDARGDVNVRLQGGAENGEFVCVGRVDPGSISYEHGTLT
EGELVLEVNTLPVSGLPLYDVLSAVRNSTGAVRLKTVRPGNKLNKDLKQYLSQRFQKSSE
DHKLQQTIRDNLYRHAVPCTTRPPRDGEVPGVDYNFLSVEDFLKLEQSGTLLEIGSYEGN
YYGTPKPPSQPAAAKVIGGEASPNEETTPRRSKSYNEMQNAGIAPADTEDEDELPEMNSS
FTGDSSEPDEHPSVHPFAPSHQLNSVPTATTESTQNTHTHPSHPTDEDPLGPLPENWEMA
YTENGEVYFIDHNTKTTSWIDPRCLDKPQKPLEECDDDELPTGWERIDDPVYGVYYVDHI
NRKTQYENPILEAKRKKQLEQSQPAEEWIEENASRAPLASYASIHQEMPRSPDPPFPQVE
AKRVKPFFTRNPAELKGTFINTKLKKSRRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDG
KMETGDVIVSVNDTCVLGYTHAQVVKIFQSIPIGSMVDLELCRGYPLPFDPDDPNTSLVT
SVAIVDKEPIIVNGQESYDSPSSHGSHNGTVSEPPRPLSPAHEPTPDGSQEQRFAGDAVT
LASSIATQPELITVHMEKGDKGFGFTIADSPGGGGQRVKQIVDYPRCRGLREGDIIVEVN
KRNVQNLTHNQVVDLLSKCPKGSEVTMLVQRGVAPAKKSPKLQPLERKDSQGSHRSFPSD
SPLHSSQAPSTETAPPPPPVQPLPGLPPQEPATDGTLAKKPDPFKIWAQSRSMYESRLPD
YQEQDIFLWRKDTGFGFRILGGNEPGEPIYIGHIVKYGAADEDGRLRSGDELICVDGTAV
VGKSHQLVVQLMQQAAKQGHVNLTVRRKTGYGVVKVDGEVPPSPASSHHSSTQAASLTED
KRTPQGSQNSLNTVSSGSGSTSGIGSGGGGGGGGGGGAGNSSVVPSVIQPYDVEIRRGEN
EGFGFVIVSSVSRPDAGTTFAGNTCVAMPHKIGRIIEGSPADRCGKLKVGDRILAVNGCS
ITNKSHSDIVNLIKEAGNTVALRIIPGDESSNAALLTNAEKIATITTTHAPQQQSAPEPR
NNTKPKQESFEFKAPQVPPPQAPTQATNQDGELYSVDLERDSKGFGFSLRGGREYNMDLY
VLRLAEEGAAVRSGKMRVGDEILEINGESTKGMKHIRAIELIKSGGRTAHLVLKRGDGSV
PEYDGNNDNSSSVNRAQTVSEVNAAPPDSQPHPPLDSSSPQDLHKTSRNEDRRTRESGQR
KQGHRSNHHHSNHRHRSPDKRGRNRHHHKKSSSSANNNNKRYSKDDSYNHQQHRRHQSPE
RRRRARSAENTLDSRHERQHGRSPERRHHRHSSPHRHHSPRRSGHRHRSPHRHRSPYRSP
HRSRYRSPRQQSNPPSDRRPNGKPQRDEDVVLKEPPSPDPSSHLDSVLNELPAMDRLNRE
SPLPRMTYDGLERGNGLTFPGKSYSRLNSNTTLPRQFPNNGTSLPHFYDRWNRDHAFPRQ
SYGHLNHDDTQPLLSFDRANRNEALRRESYDGLPQSNPFPRESTDRFSTLPRTYDGDSLP
RRTYQDQSLPRISTPDSAFQKYSALLRGRSPERKTRLSQSETPGAASYRARSLDPDMLPA
RGSRNVLDSDEEDKESSVRNYYSKLKSNYGNVNNTLPEPRRKAYKENSKDLSI
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagcggtgcagaaaaagaatcactggagcgcgagagtgagcgagtgcgcggtg
cgacgggacgcgcgcggggacgtgaacgtgcggctgcagggcggagcggagaacggggag
ttcgtgtgcgtgggccgcgtggaccccggctccatcagctacgagcacggcactctgacc
gagggagagctggtgctggaggtgaacacgctgcccgtgtccggattaccgctgtacgac
gtgctgagcgccgtgaggaactccacaggagccgttagactcaaaaccgtccgtccagga
aataagctgaataaggacctcaagcagtacctgagccagaggtttcagaagtcttcagaa
gaccacaagctccagcagaccatacgggataacctctaccgccatgctgtgccttgtacg
acccgccccccgcgcgacggagaggttcccggagtcgattataacttcctctcggtggag
gacttcctgaagctcgagcagagcgggacgcttctggagatcggctcttacgaaggtaac
tactatggtacacccaaaccgccgagccagcccgccgctgctaaagtgattggcggagag
gcgtcgcccaacgaggagaccacaccccgtcgctccaagtcctacaatgagatgcagaat
gctggaatagcccccgccgacacagaggatgaggatgagcttcctgaaatgaacagtagc
ttcacaggagactcgagtgaaccggacgaacacccctcagtccaccccttcgccccatct
caccagctcaacagcgtcccaacggcaaccacggagagcacgcagaacacgcacacgcac
cccagccaccccacggacgaggacccgctgggacctcttcccgaaaactgggagatggct
tacaccgagaacggcgaggtctacttcatagaccacaacacgaagaccacatcatggatc
gaccctcggtgcctggacaagccccagaaacccctggaggagtgtgacgatgatgagttg
cccaccggctgggaaaggatcgacgatccagtgtacggggtttattacgtagatcacatc
aacagaaagacgcagtatgagaatcccatactggaagcgaagaggaagaagcagttggag
cagtcgcagcctgcagaagagtggatagaagagaacgcttcaagagcaccgctagccagc
tacgcctccattcaccaggagatgcccagaagcccagaccctccttttccccaagtagag
gccaaacgagtgaagcctttcttcacacggaacccggccgagctgaagggaaccttcatt
aacactaagctgaagaagagccgccgcggttttggtttcacggtggtcgggggagacgag
ccggacgagttcctccagattaagagtctggtgttggacggcccggccgccctggacggc
aagatggagacaggtgacgtaatcgtcagcgtaaatgacacttgcgtcctgggctacacg
catgcacaggtggtgaagatcttccagtccattcctatcggttccatggtagacctggag
ctgtgccgaggctacccgctgccctttgaccccgacgaccccaacaccagcctggtgacc
tcggtggccatcgtggacaaggagcctatcatcgtcaatggccaagaaagctacgactcg
ccatccagtcacggcagccataacggcaccgtcagcgaacctcctcggcccttaagcccc
gcccacgagcccacccccgacggttcacaggagcagcgtttcgccggcgatgccgtgacc
ctggcgtcgtccatcgccacgcagcccgaactgatcacggtgcacatggagaaaggagac
aagggcttcggcttcaccatcgcagacagccctgggggcggcggccagcgtgtcaagcag
atcgtggattacccacgatgccgagggctcagggaaggcgatatcatcgtggaggtgaac
aagaggaacgtgcagaatcttactcacaaccaggtggtggatctgctcagcaagtgccct
aaaggcagcgaagtcaccatgctggtccagagaggggtggctcctgccaagaaaagccca
aaactgcagccgctggagagaaaagacagccagggtagccaccgcagttttccctcagac
tcgcctctccactcctcacaggctccatccacggagacggcgcctccgcctccccccgtc
cagccgctgcccggcctgccccctcaggaaccggcaacagacggcacgctcgccaagaaa
ccggacccgttcaaaatttgggcccagtccaggagcatgtatgaaagtaggctgccagat
taccaggagcaggatatctttctgtggaggaaggatacaggcttcggtttccggatcctc
ggagggaatgaaccaggagagccaatttacatcggccacattgtgaagtacggcgccgca
gacgaagacggccgcctgcgctccggggacgagctgatctgcgtggacgggacggccgtg
gtgggcaaatcccatcagcttgtggtacagctcatgcagcaggcagccaagcagggccac
gtcaacctgactgtcagacgcaagacaggatatggagtggtgaaggtggacggcgaggtt
cctccgtctccggcctcgtcccatcacagcagcacccaggccgcgtctctgaccgaggac
aagcggacgcctcagggcagccagaactctctgaacacggtcagctcgggctcaggctcc
accagcggcattggcagcggcggcggtggaggaggagggggaggaggaggggcaggcaac
agcagcgtggtgcccagtgtaatccagccgtacgacgtcgagatccggcgcggtgagaat
gagggcttcggtttcgtcatcgtctcatccgtctccagacccgacgcaggcacgactttc
gctggaaacacatgtgtggccatgcctcataaaatagggaggatcatcgagggcagtcct
gcggaccgctgcgggaagctgaaggtgggagatcgcatcctcgccgtcaacggctgctcc
atcaccaacaagtcccactcggacatcgtcaatctgatcaaagaggcgggaaacacggtc
gcgctgcgcatcattccaggagatgagtcgtcaaacgcagcgctgctgaccaacgctgag
aagatcgccaccatcactaccacacacgcacctcaacagcaatctgcacctgagccaaga
aacaacaccaaacctaaacaggagtctttcgagttcaaagcgcctcaggttcctcctccg
caagcccccacccaagctacaaaccaggatggggagctgtactccgtggacctggagaga
gacagtaaaggcttcggcttcagtctgcgcggaggacgcgagtacaacatggacctgtac
gtgctgagactggccgaagaaggagcggcagtgcgcagcggcaagatgagggtaggagat
gagattttggagattaacggcgagagcaccaaaggcatgaagcacatccgcgccatcgag
ctgatcaaaagcggtggccggacagcacacctcgtgctgaaacgcggtgacggctctgta
cccgaatatgacggcaacaacgacaacagcagctccgtcaacagggctcaaactgtttcg
gaagtgaacgcagcacctcctgacagtcagccccacccgccattggattccagctctcca
caagaccttcataaaacatcccggaatgaggacaggaggacacgtgagtcgggtcagcgc
aagcagggccaccgctccaaccatcaccatagcaaccacagacaccgctccccagacaaa
aggggcaggaacagacaccaccataagaaaagtagcagcagtgctaataataataataag
aggtacagcaaggatgattcgtacaaccatcagcagcaccggaggcaccagtcgccggag
aggaggcgccgggcgaggagcgccgagaacactctggacagccgacatgaacgtcagcac
ggtcgatcaccggaaagacgccaccatcgccactcctctcctcatcggcaccattcacca
cgtcggtcaggacaccgccacaggtcccctcaccgtcacagatcaccgtatcgctcccca
catcgctccagataccgttccccacgccagcaatccaaccctccttctgacaggcggccc
aatggcaaaccacagcgggatgaggatgttgtcttgaaggagcctccatctcctgatcct
tcttcccacttggacagtgtcctgaatgagttgcctgcaatggatcggctaaaccgcgag
agccccttgccacggatgacatacgacggtttagaacgtggcaacggcctgacattccca
ggaaagtcctacagtcgtctgaacagtaacaccaccctcccccgacagtttccaaacaac
ggtacaagcctccctcacttctatgaccgttggaaccgtgaccacgccttcccccgccag
tcctatggccacttgaaccacgatgacacgcaacccctactctcatttgaccgtgcgaac
agaaacgaagctcttcgccgagagtcctacgacggtctgccccaaagcaatcctttcccc
cgagagtccacggaccgcttttcgacactgcctcggacatacgacggggacagcctgcct
aggagaacctaccaggaccagagccttccccgcatcagtacccctgactcggctttccag
aagtacagtgcgctcttaaggggtcgctctcctgagcgaaagacccggttatcccagtcg
gagactccaggagcagcctcctacagagccaggagccttgacccagacatgttgcctgca
agaggttcccgaaacgtgctagactcggacgaggaagacaaggaaagcagtgtaagaaac
tactacagcaaactcaagtccaattacggcaatgtcaacaacacactccccgagcccagg
aggaaggcctacaaagagaactccaaagatctcagcatctga
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integrated database retrieval system
