Ictalurus punctatus (channel catfish): 108254893
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Entry
108254893 CDS
T04658
Name
(RefSeq) intraflagellar transport protein 52 homolog isoform X1
KO
K19681
intraflagellar transport protein 52
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108254893
Cilium and associated proteins [BR:
ipu03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
108254893
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GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4159
Motif
Other DBs
NCBI-GeneID:
108254893
NCBI-ProteinID:
XP_017305817
Ensembl:
ENSIPUG00000004783
UniProt:
A0A2D0PIR7
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Position
21:complement(9136279..9144198)
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AA seq
438 aa
AA seq
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MDKEQQNIVVLNSSKRELFTANTGYKSLQKRLRTQWKIQGCHIKEEITEEKLHGVKLWIT
GGPREKFTEAELQVLKQYLVRGGNILAMLGEGGEVKYDTNINFLLEEFGIMVNSDAVVRN
VYYKYFHPKEALVSNGVLNREISRAAGKAVTGIIDDENPGNNTQALAFVYPYGATLSVMK
PAVAVLSTGSVCFPLNRPVLAFSKVEKNAGKLAVLGSCHMFSDQYLDKEENSKIMDVVFQ
WLTTDNIHLNQIDAEDPEITDYTMLPDTGYLSERLRVCLQEGDENPRDFTSLFDMSLFKL
STNSLPSVIRAYKQLNVKHEPLQLITPQFETPLPPLQPAVFQPAFRDLPPPTLDLFDLDE
TFSSEKVRVAQLSNKCTDDDLEFYVRKCGDILGVTGKLDKEKRDAKHILEHIFFQVVEFK
KLNQEHDIDTAQTRFSPC
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggataaggaacagcagaatattgtcgttttgaattcgtccaaaagagagctgtttact
gccaataccggctacaagagtctacagaagagactgaggacgcaatggaagattcagggg
tgccacatcaaggaggagattacggaagagaaactgcatggtgtgaagctgtggatcacc
ggagggcctcgagagaagttcactgaagcagagctgcaagtcctgaagcagtatcttgtc
agaggcgggaacattctcgccatgctcggagaaggaggagaagtgaaatatgacactaat
atcaattttctcttggaggagttcggcatcatggtgaacagcgatgccgtagtgagaaac
gtttactacaaatacttccatcccaaagaagcacttgtgtctaacggggttctcaacagg
gagatcagccgcgcggccgggaaagcagtaacgggaatcattgatgatgaaaatccgggt
aacaatacacaggccctcgcgttcgtgtacccgtatggagctacactgagtgttatgaag
cccgcagtggcagttctgtccaccggttctgtgtgcttccctctcaacagacccgttctg
gccttctccaaggtcgagaagaatgcaggcaagctggcagtgctgggttcctgccacatg
ttcagcgatcaatacctggacaaggaggagaacagtaaaataatggatgttgtgttccag
tggctgacgaccgacaacattcacctgaatcaaatagatgctgaagatcccgagatcaca
gattacaccatgttaccagacacaggatacctctctgagagactcagagtgtgtctacag
gaaggcgatgagaatccacgcgacttcacctcccttttcgacatgtctctctttaagctg
tccacgaactctctcccgagcgttatcagggcctacaagcagctgaacgtcaaacatgag
ccgctgcagttgattacgcctcagtttgaaacgccgctgccgcctctgcagcctgccgtt
ttccagccggcctttagggacctgcccccaccgacgctcgacctttttgacctggacgag
accttttcttcggagaaagtccgagtcgctcagctgtcgaacaaatgcaccgacgatgac
ctggaattttacgtacggaaatgcggagacatcttaggggtgacgggaaagctggataaa
gaaaagcgagacgccaagcacatcctcgaacacatcttctttcaggtggtggagtttaaa
aagctgaatcaggagcatgacatcgacacagcacagacgaggttttctccatgctga
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