Ictalurus punctatus (channel catfish): 108254894
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Entry
108254894 CDS
T04658
Symbol
srsf6b
Name
(RefSeq) serine and arginine rich splicing factor 6b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03040
Spliceosome
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108254894 (srsf6b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108254894 (srsf6b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108254894 (srsf6b)
Spliceosome [BR:
ipu03041
]
Common components
Common spliceosomal components
SR proteins
108254894 (srsf6b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
Motif
Other DBs
NCBI-GeneID:
108254894
NCBI-ProteinID:
XP_017305822
UniProt:
A0A2D0PIS2
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All DBs
Position
21:complement(9144923..9149642)
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AA seq
355 aa
AA seq
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MPRVYVGRLSYHVREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDTRDADDAVYELNGKEL
CGERVVVEHARGPRRDRDGYGGGHWGSGRSSSGYSSRSRSGRDKYGPPVRTEYRLIVENL
SSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTDINGRKIR
LVEDKPKRRRSYSGSRSRSRSRRRSRSRSRRSRSSRSRSRSRSRSRSHSKRRSHSRSKRK
SHSKSPAKSRSKKSRSRSRSRKSHSRSASRKSRSKSHSKPRSERGSRSRSKEKSVSKKSR
SRSASPMENGDKKSVSRSPSPHEDRRRSKSPTKRSPSRSPSRSKSRSRSRSASQD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtgtatacgtaggcaggctgagttatcatgtccgcgaaaaggacatccagagg
ttcttcagcggctacggaaagctgttggagattgatttgaaaaacgggtacggtttcgtg
gagtttgaggacacccgtgatgctgacgatgccgtgtacgaactgaacggaaaggagctg
tgtggcgagcgtgtggttgttgagcatgccaggggcccccgtcgggaccgggacggatac
ggtgggggtcattggggttctgggcgcagtagtagtggttacagcagcaggagccgctcc
ggcagagacaaatacggaccgcccgttcgcacagagtaccggctcatcgtggagaacttg
tccagtcgatgcagctggcaggacctaaaggactttatgcggcaggccggcgaggtgacc
tatgccgacgcccacaaggaacgaacgaacgaaggcgtgattgagttccgctcctactcg
gatatgaagagagccctggacaagctggacggcactgacatcaacgggaggaaaatccgt
ctggtggaggataaacccaaacgacgacgctcgtactctggcagcaggtcccggtcccga
agcagacgccgctctcgcagcagaagccgtaggagcaggagctcacgaagccgctcaagg
tctcgctctcgctctcgatcccacagcaagcgccgctcccactccagatccaagagaaag
tcccactcaaagtctccggctaaatcccgttccaagaagtcccgctctcgttcccgctcc
cgcaagtcccacagccgttctgcgagccgcaagtcacgttccaagagccactccaagccc
cgatccgagcgtggctcccgcagccgctccaaggagaagtcggtgagcaagaaatcgcgc
agccgctcggcttcgcccatggagaacggagacaaaaaatctgtctcacgttctccttct
ccgcatgaggatcgccgccgttccaaatcgcccacaaagcggtcgccatctcgctctcct
tctcggtccaaatcccgctcacgctcccgatctgcctcgcaggactga
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