Ictalurus punctatus (channel catfish): 108254927
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Entry
108254927 CDS
T04658
Symbol
cacna1sa
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1S subunit, a
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04020
Calcium signaling pathway
ipu04260
Cardiac muscle contraction
ipu04261
Adrenergic signaling in cardiomyocytes
ipu04270
Vascular smooth muscle contraction
ipu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108254927 (cacna1sa)
04020 Calcium signaling pathway
108254927 (cacna1sa)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
108254927 (cacna1sa)
09153 Circulatory system
04260 Cardiac muscle contraction
108254927 (cacna1sa)
04261 Adrenergic signaling in cardiomyocytes
108254927 (cacna1sa)
04270 Vascular smooth muscle contraction
108254927 (cacna1sa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108254927 (cacna1sa)
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108254927 (cacna1sa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
108254927
NCBI-ProteinID:
XP_053530180
UniProt:
A0A9F7QPF8
LinkDB
All DBs
Position
21:complement(21342248..21362088)
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AA seq
1785 aa
AA seq
DB search
MEGGGEAPMSSYIMDEETLKRKQREKLKKLQATGGNPRPARSLLFLTLKNPFRKACISIV
EWKPFEIIILLTIFANCVALAVFMPMPEEDTNNTNTNLESLEYIFLIIFTLECFLKIVAY
GLLFHADAYLRNCWNILDFVIVTMGLFTIVVDFINNISGVEAPVEQKGGGFDMKALRAFR
VLRPLRLVSGVPSLQVVMSSILKSMLPLFHISLLVFFMVTIYAIIGLELFKCKMHKTCYY
KGTDIIATVENEKPSPCAEAGNGRRCALNGTVCKPGWPGPNNGITHFDNLGFSMLTVYQC
ITTQGWTDILYWVNDAIGMEWPWLYFVTLILLGSFFILNMVLGVLCGEFTKEREKSSRSG
EYQKLRERQQLDEDLKGYMEWITQAEIMDPDQEGQGLLPLQERGSETESLYELEGLNRLM
YYVRHARRWNRFFRRKCHVWVKSKLFYWLIFLLVFFNTLVIATEHHQQSQSLTDFQENSN
KALLSLFAVEMVMKMYALGLPAYFMSLFNRFDCFVVSVGILELILVHMGIMSTMGISVMR
CIRLLRLIKVTKYWTSLSNLVASLLNSVRSIASLLLLLFLFIVIFALLGMQVFGGKFNFP
DQKIRRSNFDNFPQALITVFQILTGEDWNSVMYDGIMAHGGPVIPGILVSIYFIILFICG
NYILLNVFLAIAVDNLAEAESLTSAQKEKAEEKKRKKMLRSKMSDKGDEDKSLAKKLAEQ
RAKTEGIPTTARLKVDEFESNVNEIKDPFPPADFPGDDEEEEPEIPTSPRPRPMADLQLK
ETVVPMPEASSFFVFGPQNKFRKLCHRIINATTFTNIILLFILLSSISLAAEDPIDPLSF
RNQVLAYADIVFTSVFTAEIVLKMTTYGAFLHKGSFCRNSFNILDLIVVGVSLLSMGMES
SAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLDFMFACIGV
QLFRGKFYACTDPLKMTEAECRGKFIYYQDNALHEMVIHKRKWINSNLNFDNVLNGMLAL
FTASTFEGWPKLLYKAIDSNMEDVGPVYNNRIGISIFFIVYLILIAFFMMNIFVGFVIVT
FQEQGEQEYKNCELDKNQRQCVQYALKARPLRCYIPKNPYQYQVWYIVTSCYFEYLMFLL
IMLNTMCLGMQHCNQSEHITHLSDMLNVIFTVLFTVEMILKVGAFKAKGYFGDPWNVFDF
VIVVGSIVDVILSEINVALAAQGGLYCLTGCEEVNPMQEIADSENMSVSITLFRLFRVMR
LVKLLNRFEGIRNLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALIDGTVINR
NNNFQTFPQAVLLLFRCATGEAWQEVMLGCLYGQRCDPKSDYLPGEEFTCGSGFAVLYFM
SFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKKIWAEYDPEATGRIKHLDV
VTLLRRIQPPLGFGKFCPHRVACKRLISMNMPLNSDGTVTFNATLFALVRTGLRIKTEGN
FQQANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQEHFRKFIKRQEE
YYGYRPTKNKKTTNEIQAGLRSIEEEAAPELQRAISGDLMDEDEMDRVMDEAAEDAIYRR
TGGLFGNHVDPFSLQHGGAAHTQVVSQRPLQISDVRAQDSETSPRVSTHTHNYTQYNYTH
YTNNNNNTNNNGTQSELHFPACTSDEAQGPVSAAELLIQEVLEAGGMACLAADRSFVSVT
RQEMAAALHMDMQEVERKAATMLNTCARRKATPLPRCSDDVYSQV
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atggagggtggaggtgaggctcccatgagctcatatatcatggatgaggagacgctgaag
aggaagcagagggagaaactgaagaagctccaggcaacaggaggaaatcctcgacctgct
cgctcgctcctcttcctcacgctgaagaacccattccgcaaagcctgcatcagcattgtg
gagtggaagccatttgagatcatcattcttctcaccatctttgctaactgtgtggctctc
gccgtgttcatgccaatgcctgaggaggacacgaacaacaccaacaccaacctggagagt
ttggagtacatcttcctcattatcttcacactggagtgtttcctgaagattgtggcatat
ggactgctcttccacgctgacgcatatttacgaaactgctggaacattctggacttcgtc
atagtgacgatgggtcttttcactatagtggtggacttcattaataatatcagtggtgtt
gaggccccagtggaacagaaaggtggagggtttgatatgaaagctctgagagcgtttagg
gtgctgaggccattacgactcgtctcaggagtcccgagcctgcaggtggtgatgagctcc
attctcaagtccatgctgccactgttccacatctcacttctcgtcttcttcatggtgacc
atctatgctatcatcggcctcgagcttttcaaatgcaagatgcacaaaacctgctactac
aagggcacagatatcatagcgacggtggagaatgagaagccatctccatgtgctgaagcg
ggaaacgggcggcgctgtgccctgaatgggacggtgtgtaaaccaggatggcccggtccc
aataacggcatcacacactttgataacctgggcttctccatgctcactgtttaccagtgc
atcaccacgcagggctggaccgatatcctctactgggtgaatgatgcaattgggatggag
tggccgtggctctacttcgtcactctcattctgctgggatcatttttcatcttaaacatg
gtgctgggagtcctgtgtggtgagttcactaaggagcgggagaaaagctctcggagtggt
gagtatcagaagttgcgtgaacgtcagcagctggatgaagatctgaagggttacatggag
tggatcactcaggctgagatcatggaccctgaccaggagggtcaaggtctgttgccgctg
caggagagaggttctgagacggagagcctgtacgagttggagggtctaaacagactcatg
tactatgtgcgtcatgctcgccgctggaatcggttcttccggaggaagtgccatgtgtgg
gtgaaatccaagctcttctactggctcatcttcctgctggtattcttcaacacactggtc
attgccacggagcatcatcagcagtcccagtccctcaccgacttccaagagaattcgaat
aaagctctgctgtctctgttcgcggtggagatggtgatgaagatgtacgctctcggcctc
cctgcctacttcatgtctctgtttaatcgttttgactgtttcgtcgtgtctgtggggatt
ctggagctcatcttggtccacatgggcatcatgtccaccatgggcatctcagttatgcgt
tgcattcgcctgctgcgcctcatcaaagtcacgaagtactggacatctctcagtaacctg
gtggcgtctctgttgaactcggtgcgttccatcgcgtctctcctgctcctcctcttcctc
tttatcgtcatcttcgctctgctcggcatgcaggtgtttggaggaaaattcaacttccct
gaccagaaaataagacgaagcaacttcgacaatttccctcaggcactcatcaccgtcttc
cagatcctgacaggagaggactggaacagtgtgatgtatgatggcatcatggctcatgga
ggtcctgtgatacctgggattctcgtcagcatttactttatcatcctgtttatctgcggt
aactatatcctgttgaatgtgttcttggccattgcggtggataacctggccgaggccgag
agtctcacctctgcccagaaggaaaaggcagaggaaaagaaacgtaaaaagatgctcaga
tctaaaatgtctgataaaggagatgaagataaaagtctggctaagaaactagcagagcag
cgagcaaagacggaggggatcccgaccacagcccggctgaaggtggatgagtttgagtcc
aatgtaaatgagattaaagaccctttccctccagctgactttccaggtgatgatgaggag
gaggagcctgagatccccaccagcccgaggcctcggccaatggctgacctgcagctgaag
gagacagtggtgccgatgcccgaggccagctccttcttcgtctttggcccacagaacaag
ttccgtaagttgtgccaccgcattatcaacgccacgacatttaccaacatcatcctcctc
ttcatcctgctgagcagcatctccctggcagctgaggaccccatcgacccgctgtccttc
agaaaccaggtgttggcgtacgcagacatcgtcttcacttctgtcttcacggctgagatc
gtgctgaagatgacaacgtacggtgctttcttacacaaaggctccttctgcaggaactcc
ttcaacatcctggacctgatcgtagtcggagtctcgctgctctccatggggatggaatcc
agtgccatctctgtagtgaagatcctgcgagtgctgagagtcctgagacctttacgagcc
ataaacagagcaaaaggactcaagcacgtggttcagtgtgtgtttgtggccattaagacg
atcgggaacattgtgctggtcaccatgctgctggacttcatgttcgcctgcatcggagtt
caactgttcaggggtaaattttacgcctgcacagatccactcaagatgacggaagcagag
tgcagggggaaatttatctattaccaggacaacgctctgcatgagatggtgatccacaag
aggaagtggattaacagcaacttaaactttgacaatgtgctgaatggcatgctggcactc
ttcactgcctccacttttgagggctggccaaagctgctgtataaagccatcgattccaac
atggaggatgtcggccctgtgtacaataaccgcattgggatctccatcttctttatcgtt
tatctcatcctcatcgccttcttcatgatgaacatttttgttggcttcgtgatcgtcacc
ttccaggagcagggggagcaggaatacaagaactgtgagctggacaagaaccagcgccag
tgtgtgcagtatgcactgaaggcccgcccactccgatgctacattcctaaaaacccgtat
caatatcaagtgtggtacattgtgacttcctgctactttgagtacttaatgttcctcctc
atcatgctgaacaccatgtgtctggggatgcagcactgtaatcagtcggaacacatcact
cacctgtctgatatgctgaacgtgatcttcactgttctgttcaccgtcgagatgattctt
aaagttggagccttcaaagccaagggttatttcggagacccgtggaatgtatttgacttc
gtcattgttgtcggcagcatcgttgacgtcattctgagtgaaattaatgtggccctggct
gcacagggaggtctgtactgtctgaccggctgtgaggaagtgaacccgatgcaggagatt
gcagactctgagaacatgagtgtgtccatcacactgttccgtctgttccgtgtgatgcgc
ctggtgaagctgctgaatcgatttgagggaattcgaaacctactgtggaccttcatcaag
tccttccaagctctaccatatgtggctctgctcatcgttatgctctttttcatctacgct
gtcataggcatgcaggtgtttgggaagatcgcactgattgatggaacggtgattaaccgc
aataataatttccagacatttccgcaggctgtgctgctgctcttcaggtgtgctacaggt
gaggcgtggcaggaagtgatgttgggatgtttatatggtcagcgctgtgaccccaagtca
gattacctgccaggggaggagttcacctgcggctcaggattcgccgtcctttacttcatg
agcttctacatgctgtgtgctttcctgatcattaacctgtttgtggctgtcatcatggat
aactttgattatctgacacgtgattggtcgatccttgggccacatcatctggatgagttt
aagaagatttgggcggagtacgaccccgaagccacggggcgaattaaacacctggatgtt
gtaactctgttgagaagaattcagcctccactgggcttcggcaagttctgtcctcaccgc
gtcgcctgcaagaggctgatctccatgaacatgccgttaaacagtgacggcaccgtgacc
tttaacgccacactgttcgctctcgtacgcacaggactgcgcatcaaaactgagggaaat
ttccagcaggctaatgaggagctgcgagcgatcataaagaaaatctggaagaggacaagc
atgaagctgctggatcaggtcattccacccatcggagatgacgaggtgacagtagggaag
ttctacgctacgttcctgattcaggagcatttcaggaagtttataaagcggcaggaagaa
tattacggctacagaccgaccaagaataaaaaaaccaccaatgaaatacaggctggcttg
aggagtattgaggaagaggcggctcccgagctgcagagagcgatttctggagacctgatg
gatgaagacgaaatggacagggtgatggacgaggcggctgaagacgcaatttacaggcga
actggaggcctgtttgggaatcacgtggacccgttctcactgcagcatggaggagctgca
cacactcaggttgtgagtcagcgccctctacagatcagtgacgtcagagcgcaggacagt
gaaacatcaccccgagtctccacccacacacacaactacacacaatacaactacacacac
tacacaaacaataacaacaacacaaacaacaatggcacacaaagtgagctccatttccca
gcatgcaccagtgatgaagcacagggcccagtgagtgctgctgagctactcatccaagag
gtgttggaggcagggggcatggcttgtcttgctgcagatcgcagttttgttagtgtgaca
aggcaggaaatggctgcagcactgcacatggacatgcaagaagtggagagaaaagcagca
actatgttgaacacatgtgctaggagaaaagccacgccccttcccaggtgctcagacgac
gtgtatagtcaggtgtga
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integrated database retrieval system
