Ictalurus punctatus (channel catfish): 108254931
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Entry
108254931 CDS
T04658
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108254931
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108254931
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108254931
Peptidases and inhibitors [BR:
ipu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108254931
Ubiquitin system [BR:
ipu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108254931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
SR-25
Motif
Other DBs
NCBI-GeneID:
108254931
NCBI-ProteinID:
XP_017305907
Ensembl:
ENSIPUG00000022142
UniProt:
A0A2D0PIY7
LinkDB
All DBs
Position
21:18806462..18821622
Genome browser
AA seq
1071 aa
AA seq
DB search
MRVTSDATTRPTMAPRLQLEKAAWRWVDIVKPEDITQEHIELAYRIAVPACKRGTCRYCT
LRRNCKGNPNCLVGIGEQSWLGEIDENTFHNIDDPNSERRDKNTFVGLTNLGATCYVNTF
LQVWFHNLELRRMLYQCHNSRAEVHNTESDYEPKTICEHLQYLFALLQNSNRRYIDPSGL
VKALGLDTGQQQDAQEFSKLFLSLLEDTLSKQKDPNLQNVIQQQFCGQFSYVTVCNQCGR
SSALPSRFYELELNIQGHKNLTECVTEFLKEEKLDGDNRYFCESCQSKQCATRRIKLHSL
PRTLNLQLMRFVFDRQSSHKKKLNTYISFPEVLDMSPFMEEKEEKCTYELSAVLIHRGVS
AYSGHYIAHVRDACTNDWYKFNDEEIEKMEGKKLQLGIEEDLAETVKSQSRKPKYSKGFH
CSRNAYMLVYKLQEEQVDQTQASVEVPAVLQRLVDQDNKKFEEWCNEMADMRKQSVDKGK
AKHVEVKELYELLPPREGEPYEFVPVEWLKKWLDDSTAIKEIDNCHFLCAHGKLHPDRLS
EAKRISHSAAQILFSRYGGGPRIDGSFLCRECVTQRCRVLRLKNQLNEDYREVTNLAKAQ
LKSNEQGFWIGKASLRQWRQLALEQLEEDEEETKHSDCKTNGENSTGVKDGVKENDRDDD
EMKSFNEDIVCSHGGLSIQESERRLVTGEVWSRLKVYFSNAPEFTQQQDPCQQCMRLERE
GKENEALNRMMANEQKSSLLNLFHEKNRPSLQKWPQDADILYIVPLFFVEEWRKFIRKPA
KSNPVSSIGNSILLCPHGGFMFTYDSLLQGDAQHVALLWPAEWEVICRLFLVDQTISICR
IRDPAQDNGNVQYHTQPELCRECREGFIFQQQRDLREYAQATVYVRKVIDSKKMIKEAAP
EFSMSGSEAEDEREEPKIEGEKDPDFNQSEDGAKRQKLNEASPAVAISSSSSSSSSSSSA
PAVGKSGIRRSMRHRKLRGEKALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGRSLTD
DSATLGSLGVFPESVICLKADEPIADYAAMDDAYQVCLPEEGFKGTGLLGH
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgacgtcagacgcaacgacacgtcctacaatggcccctcgtctgcagctggag
aaagccgcttggcgatgggtcgacatagtgaaaccagaggacataacacaggaacacatc
gagttggcgtaccgtattgccgtaccggcgtgtaagagggggacatgcaggtactgcact
ctcaggaggaactgcaaagggaacccgaattgtctagtcggaattggggaacaatcgtgg
ctgggagaaattgacgaaaacaccttccacaacatcgacgacccaaactctgaaagaaga
gacaagaacacgtttgttggcctgacgaatctcggcgccacgtgttacgtgaacactttc
ctccaggtgtggttccacaacctggagctgcgccggatgctttaccagtgtcacaactct
cgagctgaggtgcacaacacggagtcagattatgagccgaagacgatatgcgaacacctg
cagtacctgtttgctttgctgcagaacagcaacagaaggtacatcgacccctcgggtttg
gtgaaggcgctgggactcgatacggggcaacagcaggatgcgcaggaattttccaaactc
ttcctttcgctcctggaagacactctgtccaagcagaaagatccaaacctccaaaacgtg
attcagcagcagttctgtggacagttttcttacgttaccgtgtgtaaccagtgcggacga
tcgtctgctttaccgtctcggttttacgagctggagctcaatatacaagggcacaaaaac
ctgacagagtgcgtcaccgagttcctcaaggaggagaaattagacggggataaccgctac
ttctgcgagagctgtcagagcaagcaatgcgccacgcgtcggattaagctccacagcctg
ccgcggactctcaaccttcagctcatgcgctttgtgtttgataggcagtccagtcacaag
aagaagctaaacacttacattagttttccagaagtccttgacatgagcccgtttatggaa
gaaaaagaggagaagtgtacatacgagctgagcgccgtgctgattcaccgtggcgtcagc
gcctactccggccactacatcgctcacgtacgagacgcttgcaccaacgactggtacaag
ttcaacgatgaggagattgagaaaatggagggcaagaagctccagctgggcatcgaggag
gacctggctgaaactgtgaagtcacagagccggaagcctaaatatagcaaaggctttcac
tgttcgagaaatgcctatatgttggtgtataaacttcaggaagagcaggtggaccaaacc
caggccagcgtggaggtgccagccgtcctccagaggcttgtggaccaggacaacaagaag
tttgaggagtggtgcaacgagatggcggatatgaggaagcagagcgtggacaagggcaaa
gccaaacacgtggaggtcaaagagctctatgagctgttacctccacgagagggtgagccg
tatgagtttgtccctgtggagtggctgaaaaagtggctggatgactcgacagccatcaaa
gagattgacaactgccacttcctgtgtgcgcatggaaagttgcacccagaccgcctgagc
gaggccaaacgcatttcccacagtgctgctcagatcctgtttagtcgctacggtggagga
cctagaatagacggatcgttcctgtgtagagagtgtgtaacccaacggtgccgtgtcctg
aggcttaaaaaccagctcaatgaagactacagagaggtgaccaacctcgccaaggctcag
ctgaaaagcaacgaacagggtttctggatcgggaaggcgtctctgaggcagtggaggcag
ctggctctggagcagctggaggaggatgaagaggagaccaaacacagcgactgcaaaaca
aacggggaaaattccacaggtgtaaaagacggcgtgaaggagaacgaccgggatgacgac
gagatgaagagttttaacgaagacattgtctgctctcacggcggtctgagtattcaggag
agtgagagacggctggtcacgggcgaggtatggagcaggctgaaggtttatttctccaat
gcgccagagttcacacagcaacaggatccctgccagcagtgcatgaggttggagagggag
ggtaaagagaatgaggctctaaatcgaatgatggccaacgagcaaaagagctctctcctc
aatcttttccatgagaagaatcgtccttcactgcaaaagtggcctcaggacgccgatatt
ctgtacatcgtgccgttgttcttcgttgaggagtggaggaagtttatcaggaagccagcc
aagtcgaacccggtgtccagcattggaaacagcatcctgctgtgccctcatggtggcttc
atgttcacctacgactccttgcttcagggagatgcccagcatgtagctctgctctggcct
gctgaatgggaggtgatctgcaggctgttcttggtggaccaaaccatctctatatgcagg
atccgcgatccagcgcaagacaacgggaatgtgcagtaccacacccagcctgagctgtgt
cgagaatgccgcgagggcttcatattccagcagcaaagggacttgcgggagtacgcacag
gccaccgtttacgtacgcaaagtcatcgacagcaagaagatgattaaagaggctgctcct
gagttcagtatgagtggatctgaagcagaggatgagagagaagagcccaaaatagaagga
gaaaaagaccctgacttcaatcagtctgaggacggagcgaagcggcagaagctgaacgag
gcgagtcctgccgtcgccatctcttcctcctcctcttcttcctcctcctcgtcctccgct
cctgctgtggggaagtcagggattcggcggagcatgcggcacaggaagctgcgcggggag
aaagccctcatcgtctccgccaaccagaccctgaaggaactcaagatccagatcatgcac
gccttctccgtcgctccgttcgaccaaaacctgtccatagacggccgatctttaaccgac
gactcggccacgctaggaagccttggagtctttccagaaagcgttatatgtctaaaggct
gatgagccaattgcagattacgcagctatggacgatgcgtaccaagtctgtttgcctgaa
gaaggatttaaaggtactggactactaggacactga
DBGET
integrated database retrieval system
