Ictalurus punctatus (channel catfish): 108254944
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Entry
108254944 CDS
T04658
Name
(RefSeq) nuclear transcription factor Y subunit alpha isoform X1
KO
K08064
nuclear transcription factor Y, alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108254944
Transcription factors [BR:
ipu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
108254944
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
FixG_C
Motif
Other DBs
NCBI-GeneID:
108254944
NCBI-ProteinID:
XP_017305949
Ensembl:
ENSIPUG00000021947
UniProt:
A0A979EK28
LinkDB
All DBs
Position
21:18918817..18924862
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AA seq
340 aa
AA seq
DB search
MEQFAESTSSGEQIVVQASSGAVQQQSTVTAVQLQADGQVDAGSGQQVQTLQVVQGQPLM
VQVSGGQLITPSGQPIMVQAMPGGQAQTIMQLPVTGSQGLQQIQLVQPGQIQLSGGQTLQ
VQTAQGQTQQIIIQQPQTAVTAGQNQPQQITVQGQQAQTAEGQTILYQPVNADGTILQQG
VITIPAASLAGGQIIQTGSNASATGGQGTVTVAVPVTGNMVNAGGMVMMVQSGGSVPTMQ
RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR
KRGDGGRFFSGKEKDELDVQVESEQAPVGEEAVTQMISVS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagcagttcgccgagtcgacgagcagtggagagcagatcgtggtgcaggcgtccagt
ggagcggtgcagcagcagagcacagtgactgcagtacagctgcaggccgacggccaggtg
gatgcgggttcaggccagcaggttcagactctccaggtagttcaagggcagcctttaatg
gtgcaggtcagcgggggtcagctcatcaccccttccgggcagcccataatggtacaggcc
atgccgggaggacaggcgcagacgatcatgcagctaccggtgacgggctcgcagggtctt
cagcagatccagctcgtgcagccgggacagattcagctctcaggaggtcaaacgctgcag
gtacaaacagcacagggacaaactcagcagatcatcatccagcagccgcagactgcagtg
accgcaggacagaaccagcctcagcagatcacagtgcagggtcagcaggctcagacggcg
gagggtcagaccatcctgtaccagccggtcaacgctgacggaaccatcctccagcagggc
gtgatcactattccggctgccagtttagcaggaggtcagatcatccagacgggttcaaac
gcgagcgccaccgggggtcagggcaccgtgactgtcgccgttcccgtcacaggaaacatg
gtcaacgctggaggaatggtcatgatggtccaaagcggcggctctgtcccgaccatgcag
cggatccctctccccggagctgagatgctggaggaggagccgctctacgtcaacgccaag
cagtaccaccgcatcctgaagagacgccaggcccgcgccaagctggaggccgagggcaag
atccccaaagaaaggaggaaatacctgcacgagtctcgtcatcggcacgccatggcgcgg
aagcgtggtgatggcgggcgcttcttttcggggaaggagaaggacgagctggatgtgcag
gtggagtcagagcaggccccggtcggagaggaagctgtgactcaaatgatcagcgtttca
taa
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