Ictalurus punctatus (channel catfish): 108255076
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Entry
108255076 CDS
T04658
Name
(RefSeq) dystroglycan
KO
K06265
dystroglycan 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03273
Virion - Lassa virus and SFTS virus
ipu04512
ECM-receptor interaction
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
108255076
03268 Virion - Orthopoxvirus
108255076
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108255076
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108255076
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Gene cluster
GFIT
Motif
Pfam:
DAG1
a_DG1_N2
He_PIG
PRIMA1
DUF4064
ATP1G1_PLM_MAT8
Motif
Other DBs
NCBI-GeneID:
108255076
NCBI-ProteinID:
XP_017306217
Ensembl:
ENSIPUG00000008175
UniProt:
W5UA28
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All DBs
Position
21:6227886..6281722
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AA seq
867 aa
AA seq
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MRNKLSKFRDAGCWRILRLGSRTIALLLLTVMLPAEAQASSPQGTLEVLGDMAQLEASMH
SAVLSDLQEAQAVVSAVAQPSGFPDSSAVVGRMFQMQIPTKAKDSGSIVKITEAGKDTLP
SWLHWEPMSSTLQGLPLEVDKGVHYISVSIANASHASQSPDVFSIEVHPEEHADTDPIQL
AIQLTDNDSQHFVCGNEDPVTVLTVILDADLTKMSSKQRVELLASMKKFSGVGLQHMKVL
PVVNNRLFDMSAFMAGPGNAKKVVENGALLSWKLGCALDQSNIPNINSVQVPAKEGTMSA
HLGYPVVGWYIANKKPHIPKRVRRQLNTPTPVPSLLPPSTYPEPSSRIVPTPTSRSIGPT
SDSSSQPVRGPVPLPVKPTIRPKDSIAHTPTLGPPQPTKIMDTTSSIAIQPTMTRPLYVG
PSVTPPTPTTKKPTKRPKKPKTTPIPKEPKTTTAKPPRRTTPSVVLHDGNTRPELRNPID
QVKSFIGTYFEVKIPSDTFFDREDGTTDKLRLTLRKNSDVVGEDSWIQFNSTSQLLYGLP
DWQHEGKHEYFMQATDKGGLYTTDAFEVRVNRFGNNVKSPVLFAARFEGDPRSVTNDIHK
KILLVKKLAYSFGDRNSSSITLKNITKGSIVIEWTNSSLQQHPCPKEQIQAMSRRISDAE
GKPSPVFNNAMEPDFRPINITIKGTGSCRNYMFVPPAEIPDPIPPAVTPAVGAGRQSNDD
VYLHTVIPAVVVAAILLIAGIIAMICYRKKRKGKLTIEDQATFIKKGVPIIFADELDDSK
PPPSSSMPLILQEEKPPLPPPEYPNMASPETTPLNQDILGEYSGLQDEDPNAPPYQPPPP
FSAPMEGKGSRPKNMTPYRSPPPYVPP
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaataaactgagcaagttccgggacgcaggctgctggcgcatactgaggctgggg
agcaggactatagcgctgctcctgctgacagtcatgctgccggcggaagctcaggcttca
tcaccccagggaaccttggaggtgcttggggacatggcacagctggaggcctccatgcac
tcagcagtgctctctgacctccaggaggcgcaagcagtggtgtctgcagtggcgcaacca
agcggcttcccagattcctctgcggtagtaggaaggatgttccagatgcagatccccaca
aaagccaaggattctgggagcatagtgaagattacagaggcaggcaaagatacactacca
tcatggttgcactgggaaccaatgagcagcacccttcagggacttcctttggaggttgac
aagggtgtccactacatatctgtctctattgccaatgcaagccatgcgtcccagagtcct
gatgtattttccattgaggttcatccagaggaacatgctgacacagaccctattcagtta
gcaatccagttaactgacaatgattctcagcatttcgtctgtggcaacgaagaccctgtt
actgtgcttacagtaattttggatgcagaccttactaagatgagctccaaacagagagtg
gagcttttggctagcatgaaaaaattctcgggcgtagggctccagcatatgaaggttttg
cccgttgtcaacaatcgcttgtttgatatgtctgcttttatggctgggccaggaaatgcc
aaaaaggttgtagaaaatggtgctttattgtcttggaaacttggttgtgccctggatcaa
agcaacattcccaacatcaatagtgttcaagttccagcaaaggaagggacaatgtcagca
catttgggatatccagtggtgggatggtacattgctaacaaaaagccacatatacctaaa
cgagtacggcggcagcttaatacccctacccctgtgccctccttgcttcctccatcaaca
taccctgagccatcgagccgaattgtgcccacaccaacatcccgatcaattggaccaact
tcagacagttcctcacaacctgtgcggggccctgtaccactgcctgtgaaacccactatt
cgccccaaggattcaattgctcatactcccacattaggaccccctcagcccacaaaaatt
atggacactaccagcagtattgcaatacagcccaccatgaccaggccactgtatgttggg
ccttctgtaacaccaccaacaccaaccaccaagaaaccaacaaaaaggcccaagaaaccc
aagaccaccccaataccgaaggaacctaagacaaccacagccaagccaccccgacgtacc
accccctcagttgttttacatgatggcaatacaagaccagagctgcgcaacccaattgat
caagttaagtcattcattggcacgtactttgaggtgaaaatcccatctgacacattcttt
gatcgagaagatggtacaactgacaagttaagattaacgctgaggaaaaacagtgatgtt
gttggagaagactcctggattcagttcaatagcactagccagttgctttatggattacca
gactggcagcatgagggcaaacatgaatactttatgcaggcaactgacaaaggtggtctc
tacacaacagatgcctttgaggtccgtgttaatcgctttggaaacaatgttaagtcccca
gtcctgtttgctgctcgatttgaaggggatcctcgttcggttaccaatgatatccataag
aagatccttcttgtcaagaaattggcctattcatttggtgatcgcaattccagttcaatt
acactgaagaatattactaagggatccattgtaatagagtggaccaacagcagcctccaa
caacacccgtgtcccaaggagcaaattcaggccatgagtcgaaggatctctgatgctgaa
ggcaaaccttcgccagtattcaacaatgccatggaaccagacttcagacccataaatatc
actatcaaaggaacgggtagctgtcgcaactacatgtttgttccgccagctgagatccca
gaccccattccgcctgctgttacaccagctgtaggagcaggacgacagagcaacgatgac
gtatatcttcacactgtcataccagctgtggtggttgcagcaatcctgttgattgcaggc
atcattgctatgatttgctatcgcaagaagcgtaaggggaagcttactattgaagaccaa
gcaaccttcattaaaaaaggagttcccatcatttttgctgatgaactcgatgactctaag
ccacctccatcatctagcatgcctcttatcctccaagaggaaaaacctcctctcccacca
cccgagtatcccaatatggccagtccagagaccacacctctgaaccaagacattttggga
gagtattcaggcctacaggatgaggaccccaatgcccctccctaccagcctccacccccc
ttctctgctcccatggaaggtaaagggtcccgcccgaagaacatgaccccctacagatca
ccacccccctatgtgccaccctaa
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