Ictalurus punctatus (channel catfish): 108255077
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Entry
108255077 CDS
T04658
Symbol
ddx19b
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03013
Nucleocytoplasmic transport
ipu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108255077 (ddx19b)
03015 mRNA surveillance pathway
108255077 (ddx19b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108255077 (ddx19b)
Enzymes [BR:
ipu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108255077 (ddx19b)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108255077 (ddx19b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
108255077
NCBI-ProteinID:
XP_017306221
Ensembl:
ENSIPUG00000023912
UniProt:
A0A2D0PLC5
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All DBs
Position
21:complement(14931444..14940424)
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AA seq
479 aa
AA seq
DB search
MATDSWAQAVDQQEAAAESISNLQLSEKEDKPKAEENGAKAEGEGEKTEEEEKEDKAAQS
LLNKLIRSNLVNTTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
TALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPSNRWPQCLCVSPTYELALQTGK
VIEQMGKFYPEVQLVYAIRGNKLERGVKLQEQIVIGTPGTVLDWCQKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPKSCQMLLFSATFEESVWNFAKRIIPDPNIIKLKRE
EETLDTIKQYYVMCDSREEKFHALCNIYGAITIAQAMIFCHTRKTAGWLAGELSREGHQV
ALLSGEMQVEQRAAVIERFRNGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSRFSMNILNRIQEHFNKKIEKLDADDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggctacggattcctgggctcaggctgtggatcaacaagaagctgcagctgagtcgata
agcaaccttcaattaagtgaaaaggaagacaaaccaaaagcagaggaaaatggagccaag
gctgagggagaaggagagaagactgaggaggaagaaaaagaggacaaagcagctcagtcg
ctgttgaacaagttgatacgaagcaatctagtgaacaccaccaaccaagtggaagttctc
caaagggatccgaactctccgctttactcggtcaagtcgtttgaggagctgcgcttgaag
cctcagctacttcaaggtgtttatgctatgggcttcaacagaccctcgaaaatccaggag
accgccttgcccatgatgcttgcagaacccccacagaatcttatagcgcagtctcagtcg
ggtacaggtaaaactgccgcattcgtcctggctatgctcagtcacgtggatcccagcaac
agatggcctcagtgcctgtgtgtgtcgcctacatacgagctcgccctccagacgggcaag
gtcatcgagcagatgggcaaattttaccctgaagtccagctggtgtatgcaatccgagga
aacaaattggagagaggggtgaagctccaggagcagattgtgatcggcactcctggcaca
gtcctggactggtgccaaaagctcaaattcatcgacccaaagaaaattaaagtgtttgtt
ctggacgaggcagacgtcatgatcgccacacagggtcaccaggaccaaagcattcgcatc
cagaggatgttgcctaaatcctgccagatgctcttgttctctgcaacgttcgaggagtct
gtgtggaacttcgccaagcggatcatccccgacccgaacatcatcaaactgaagagagag
gaggagacgctggacaccattaagcagtactatgtgatgtgcgacagcagggaggagaag
ttccacgccctgtgtaacatctacggtgccatcactatcgcacaggccatgatcttctgt
cataccaggaaaacagcggggtggctagcaggagagctgtctagggagggccaccaggtg
gcgctactcagcggtgagatgcaggtggaacagagagctgcggttatcgagcgtttccgc
aatggcaaagagaaagtcctggtcactacaaacgtctgtgcccgaggtatcgatgtggag
caggtctcggtggttattaatttcgatttacccgtggacaaggatggaaaccctgacaac
gagacgtacctgcaccggatcgggcgcactgggagatttggcaagcgagggctggcgatc
aacatggtggacagcaggtttagcatgaacattctcaaccgcattcaggagcacttcaat
aagaaaattgaaaaactggatgcggacgatttggatgaaatcgagaaaatagcgaactga
DBGET
integrated database retrieval system
