Ictalurus punctatus (channel catfish): 108255080
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Entry
108255080 CDS
T04658
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04217
Necroptosis
ipu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
108255080
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108255080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108255080
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108255080
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108255080
Multi subunit type E3
LUBAC complex
108255080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
IBR
zf-C3HC4
ubiquitin
zf-RING_UBOX
zf-RING_2
IBR_1
Peptidase_C23
Motif
Other DBs
NCBI-GeneID:
108255080
NCBI-ProteinID:
XP_017306226
Ensembl:
ENSIPUG00000010047
UniProt:
A0A2D0PLD1
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Position
21:4402694..4416700
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AA seq
513 aa
AA seq
DB search
MAVQFTTTNMRKAEETVQSLSEAINTGDKAEAIRCVEQLLTLNVPVCMRLTPEAYSQECI
RLRVGVEDALSDAYITMLVTPGMTISELKQKVSRDYGFHPSLQCWIIGKRFAKDGDTLFS
HNVTCDDDQAFLFIRSAHSANLSHEQQKQEEQNRKIGGIIENIEVLSRGAAELGARRKRP
QTPPEQKTPRKPPPKPVIGWSCLQCTYMNKPTRPGCAMCSAERPENYQIPDIYQPDEEET
RRIQQEELASLQYQQSIREEREKNFLSLLETDNHDLVSNTEEICCPICCEEVVAGEGVTL
RECLHSFCRECVKMTILNCVDAEVTCPYADGEYSCDCKLLDREIKTLLSPDECQKFLELR
LNIAESRSENSYHCKTPDCPGWCIFEDDVNEFACDICNETNCLLCKAVHKDMNCKDYQDD
LRLRAENDAAAKRTTEILEMMLQNGEAMYCPKCKVIIQKKDGCDWICCLMCKTEICWVTK
QARWGPQGNGDVSGGCKCRINGAPCHPNCQNCH
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcaattcaccaccaccaacatgaggaaagcggaggaaacggttcagtcgctc
agtgaggccatcaatacgggagacaaagccgaggccatccgatgtgtagagcagctcctt
acgctgaacgtgcctgtgtgtatgcgacttactccggaggcctattcccaagagtgcatc
aggttgagagttggtgttgaagatgcgctgtctgacgcctacatcacgatgctggtgact
cctggcatgacgatctcagagctgaaacagaaggttagccgagactatggcttccacccg
tcactacagtgctggatcatagggaagcgttttgctaaggatggagacaccctgttcagc
cacaacgtgacctgtgatgatgatcaggcatttcttttcatcaggtctgcccattctgcc
aatctaagccatgaacagcagaaacaagaggagcagaacaggaagataggcggtataatt
gagaacattgaggtgctcagtagaggtgcagcagagttgggagcacgacgcaaacgacct
caaacacctcctgaacaaaaaactccccgaaagcctcctcctaaaccagtgataggatgg
tcgtgtttgcagtgcacgtatatgaacaaacccacacggccagggtgcgcaatgtgcagt
gctgagagaccagaaaactatcaaataccagatatataccaaccagatgaagaggaaacg
cgcagaattcagcaagaagagctggccagtctacagtaccaacagtccatcagagaggag
cgagagaagaatttcctcagtctgctggagaccgacaatcacgaccttgttagtaacaca
gaggagatttgctgtcccatctgctgcgaggaggtcgtggcaggagagggcgtcactctc
cgagagtgccttcacagcttctgcagagaatgtgtgaagatgaccattctgaactgtgtg
gatgcagaagtgacgtgtccttatgcagatggggagtactcctgtgactgcaagcttctg
gaccgagagattaaaacactcctgtcacctgacgagtgccagaagtttttggagttgagg
ctgaatattgccgagtcacgcagtgagaacagttaccactgtaaaaccccggactgcccc
ggctggtgcatatttgaagacgatgtcaacgagtttgcctgcgacatctgcaatgaaacc
aattgcctcctctgcaaggccgttcacaaagacatgaactgtaaagactaccaagatgac
cttcgcctcagggcagagaacgatgctgcagccaaacgaaccacagagatactcgagatg
atgttgcagaatggtgaagccatgtactgtcctaaatgcaaagtgatcatccagaagaaa
gacggttgtgactggatctgctgcctcatgtgtaagacggagatctgttgggtgaccaaa
caggccagatggggtcctcagggtaatggagacgtctcgggtggatgtaaatgtcgcatc
aacggtgccccttgtcacccaaattgtcaaaactgtcactga
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