Ictalurus punctatus (channel catfish): 108255096
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Entry
108255096 CDS
T04658
Symbol
traip
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP isoform X1
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108255096 (traip)
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108255096 (traip)
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108255096 (traip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_11
Crescentin
zf-RING_5
zf-ANAPC11
zf-C3HC4_4
zf-RING_Vps41
HIP1_clath_bdg
MAD
zf-RING_16
Zn_ribbon_8
zf_RING_Vps8
KxDL
KASH_CCD
Gp58
COG3_N
zf-RING-like
CALCOCO1
Vps52_CC
Sec3_CC
FANCL_C
WEMBL
EF-hand_like
zf-Nse
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
108255096
NCBI-ProteinID:
XP_017306252
Ensembl:
ENSIPUG00000021041
UniProt:
A0A2D0PJS9
LinkDB
All DBs
Position
21:19505271..19512047
Genome browser
AA seq
455 aa
AA seq
DB search
MPIRAYCTICSDYFDHSRDVAAIHCGHTFHYACLLQWFQSAPTKTCPQCRKQVSTRHIIN
KLFFDVAPDEEGSAADPESLQNELDRMKVVLCEKERDWRDKQKAAESLKETIEKQRADLD
RVRREIGEKEMLCTALRKQMQYLESQQRESEAAKEEAKRLRVKMKTYESLDMVLQGQRAE
VEAMISDMGVGQSAVEQLSIYCISLKKEYDSLKVCLRTSNEMCEKLKREVFCSNNKLQKV
TLEMNRAKEDMKAFQNDLANSDKEITSLKKKVEILQKTLSTPTRTNEAISRLVFESPAPI
ELKSPRLHRPSDSQDIDLNMTFDISTPEQVEKKPAAVPSKKMRLDQAARTSSKHGENTFG
SKISHPKDDEVSMEPMFRNSLLFRKKMFGSMLDPHSKPGAVRTGYDGLGGRTKFIQPSPL
AEIRPLVMKAKRKKVSRPAPSKLTPNLATLDGFLE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgggcgtactgcaccatctgctcggattactttgaccattccagagatgta
gcagcgatccactgtggtcacacgttccactatgcctgtcttctacagtggttccagtca
gctcccactaagacctgtccccagtgcaggaagcaggtcagcaccagacacatcatcaac
aagctgttcttcgatgtagcgccggacgaagaggggtctgcagccgaccccgagagcctg
cagaacgagttggatcgaatgaaagtagttttatgtgaaaaagagagagactggagagac
aaacagaaagcggccgagtctctgaaggagacgatcgagaagcagagagccgacctggac
agagtgaggagagagatcggagagaaggagatgctctgtaccgccctgagaaagcagatg
cagtatttggagagtcagcagcgagaaagcgaggcagctaaagaggaggccaagaggctg
cgggtcaaaatgaaaacctacgaaagcctggacatggtactgcagggtcagagggcagag
gtggaggccatgatctcggacatgggcgtgggacagtcggctgtggagcagctctccatc
tactgcatctctctcaaaaaagagtacgacagtctgaaagtctgcctccggacctccaac
gagatgtgcgagaagctgaagagggaagtgttctgctctaataacaagttgcagaaagtc
acgctagagatgaaccgagcgaaggaggacatgaaggcttttcagaatgacctcgccaac
tcggataaagagatcacgagtctaaagaagaaagtggagatcctgcagaagaccctgagc
actcccacacgcaccaacgaggccatcagccgcctcgtgttcgagagccccgcccccatc
gaactcaagtccccacgcctgcaccggccctcggacagccaggacatcgacctcaacatg
acctttgacatcagcacacctgagcaggtggagaagaagccagcggccgtcccctcgaag
aagatgcgcctggatcaggcagctaggacgtcgtccaaacacggcgagaacacgttcggg
agtaagatctcacaccctaaagatgacgaggtttccatggagcccatgttcaggaactct
ctgcttttcaggaagaagatgtttggcagcatgctcgacccgcacagcaaacctggagct
gtaagaacgggctacgatggactcggaggaaggaccaaattcatccagccttctccgctg
gctgagatccggccgctcgtcatgaaggcaaagaggaagaaagtgtcgaggccagcgccg
agcaaactgacccctaacctcgccaccctggacggattcctggagtga
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