Ictalurus punctatus (channel catfish): 108255139
Help
Entry
108255139 CDS
T04658
Name
(RefSeq) endothelin-3 isoform X1
KO
K05227
endothelin-3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108255139
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
108255139
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ipu04052
]
108255139
Cytokines and neuropeptides [BR:
ipu04052
]
Neuropeptides
GPCR binding
108255139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endothelin
Motif
Other DBs
NCBI-GeneID:
108255139
NCBI-ProteinID:
XP_017306343
Ensembl:
ENSIPUG00000004685
UniProt:
A0A2D0PIJ4
LinkDB
All DBs
Position
21:complement(9274782..9283078)
Genome browser
AA seq
169 aa
AA seq
DB search
MVKTYLQVRWCDIVTISLTPIVYSLSRATGIPLHRIVAREESALEAERASMGARTAPAPA
PTERTRGSADAHDHDHDVTGSSRDSHPRSRAKRCTCYTYKDKECVYYCHLDVIWVNTPER
MVPYGLSSYRGSQRARRSAADRRTTQRCACTLQSDPHCNSFCGKRGRLP
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaacttatcttcaagtaaggtggtgtgatattgttaccatatcgctcactcct
atagtttactccttgtctcgtgccacagggattcctctgcaccggattgtcgcgcgcgag
gagagcgcacttgaggccgagcgagcgagcatgggcgcgaggacagcaccggcaccggca
cccacggaacgcacgcgcggatccgccgacgcccacgaccacgaccacgacgtcacagga
tcgtcgcgcgactctcatccgcggagcagagccaaacggtgcacgtgctatacgtacaaa
gacaaagagtgcgtttattattgtcacctggatgtcatctgggtgaacacgccagagcgt
atggtgccgtacggcctgtcaagttacagaggctctcagcgtgcaaggcgctctgcagca
gacaggagaacgacacaacgatgtgcgtgcaccctgcaaagcgaccctcattgcaacagc
ttctgtgggaaaagggggaggttaccatga
DBGET
integrated database retrieval system