Ictalurus punctatus (channel catfish): 108255142
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Entry
108255142 CDS
T04658
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108255142
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
108255142
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
DUF5365
Motif
Other DBs
NCBI-GeneID:
108255142
NCBI-ProteinID:
XP_017306346
Ensembl:
ENSIPUG00000021779
UniProt:
W5ULG3
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All DBs
Position
21:19176164..19181049
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AA seq
403 aa
AA seq
DB search
MERITSAQPPPRLAKQNPLDMAAMPGMEFPMYVYKPRRGAKRGEDTKDTYKLPHRLIEKK
RRDRINECIAQLKDLLPEHLKLSTLGHLEKAVVLELTLKHVKALNSLLEQQQQQIISLQN
GMQIGDHINGSLEKSEEMFRSGFHLCAKEVLQYMADQENAQDLTPTHILNHLHKVASELP
QRPISPRQDAPSPARKVHEIREKPVVVPARMPEGHTKNCVPVIQRTYPHSSEQSGSDTDT
DSGYGGELDKEKRDSKAQRPGYYSKEGAELKYGIKEEWDEPQAKRQRSDSSEDESLLGHG
GYASFSSHQPPLCMPFYLLPPVSAAAAAAYLPVLEKCWYPGGMPMLYPGLGGSTPGLSPE
KHPLSFIVSPRVASPTTSHAHTDSPALHQALKQVPPLHLETKD
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggagcggattacgagcgcacagcctcctccacgtctggccaagcagaacccgttggac
atggctgccatgccgggcatggagttccctatgtacgtatacaagcccagaagaggtgcg
aaacgcggcgaggacaccaaggacacgtataaactgccgcatcgcctgatcgagaagaaa
agacgtgacaggataaatgaatgcatcgcccagctgaaggacctgctaccagagcacctg
aaactctccacgctgggccatttggaaaaggccgtggtgctggagctgacgttgaagcac
gtgaaagctctcaacagcctgctggagcagcagcagcagcaaatcatatccctgcagaat
ggaatgcagatcggtgatcacatcaatgggagcttggagaagagcgaggagatgttccgc
tctggtttccatttgtgtgccaaggaggttttgcagtacatggcggaccaggagaacgcg
caggatctgactcctacgcacatcttgaaccatctgcacaaggtggcctccgagctgccg
cagcggccgatcagcccgcggcaggacgcgccttcgcctgcacgcaaagtccatgagatt
cgtgagaagccggtggtggtgccagccaggatgccagagggccacaccaaaaactgcgtc
cctgtgatccagaggacttacccacatagcagcgagcagagcggaagcgacacggacacg
gacagcggctacggtggggagctggacaaagagaagcgtgactccaaagctcagcggccc
ggctactacagcaaagagggcgccgaattgaaatacggcatcaaggaggagtgggatgag
ccgcaggccaaacggcagaggtcggactcttctgaggatgagtctctgctgggtcacggt
gggtatgcaagcttctcttcccatcagccacctctatgcatgcccttctacctcctccct
cctgtgtcggcggccgctgctgccgcgtacctccccgttctggagaagtgctggtaccca
gggggcatgcccatgctgtaccccggcctcgggggttccacgccaggcttatctcccgag
aaacaccccttgtcgttcatcgtgtcgcccagagtagcgtcccctaccacctctcatgct
catacagactctccagccctgcaccaggccctaaaacaagtgccccccttacatctggaa
accaaagactga
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