Ictalurus punctatus (channel catfish): 108255164
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Entry
108255164 CDS
T04658
Name
(RefSeq) ras-related protein Rab-43
KO
K07930
Ras-related protein Rab-43
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108255164
04031 GTP-binding proteins [BR:
ipu04031
]
108255164
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108255164
GTP-binding proteins [BR:
ipu04031
]
Small (monomeric) G-proteins
Rab Family
Rab19/30/43 [OT]
108255164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
FeoB_N
Gtr1_RagA
ATP_bind_1
PduV-EutP
AAA_7
Septin
AAA_22
DUF2786
AAA_5
TsaE
MMR_HSR1_Xtn
NTPase_1
Motif
Other DBs
NCBI-GeneID:
108255164
NCBI-ProteinID:
XP_017306387
Ensembl:
ENSIPUG00000011323
UniProt:
W5U6M2
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All DBs
Position
21:complement(3877320..3884900)
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AA seq
209 aa
AA seq
DB search
MALLETDDSYDFVFKIVLVGDVGVGKTCVVQRFKTGTFIERQGNTIGVDFTMKTMEIQGK
RVKLQIWDTAGQERFRTITQSYYRSTNGAIITYDITKKASFMAVPKWMEDVKKYGGSNIA
TLLIGNKSDLTEERDVSFEEAQSMAHQLDFISAIETSAKDSSNVDEAFNKMAAELMLRHG
GPVFRDSVTDSFKLNSKDVSGEAWSCGSC
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggcgttactggaaacggacgacagttatgatttcgtcttcaaaatagttttggtcggg
gatgtcggtgtggggaaaacctgcgtggttcagcgttttaagacgggcacttttatcgaa
aggcaaggtaacacaatcggagtggattttacaatgaagacgatggaaattcaggggaaa
agagttaagttgcagatttgggacacggcggggcaggagaggtttcggactatcacgcag
agctactaccgcagcacaaatggcgccataatcacgtacgacatcaccaagaaagcatcc
ttcatggctgtgcccaaatggatggaggacgtcaagaaatatggcggctcaaacattgcc
actcttttaataggtaataaatcagacttaactgaagagcgtgatgtttcttttgaggaa
gctcagtcgatggctcaccagctggacttcatcagcgctattgaaacgtctgccaaagac
tccagcaacgtggacgaagcgtttaataaaatggcagccgagctgatgctgagacacggc
gggcccgtgttcagagacagcgtaaccgacagcttcaaactcaacagcaaggacgtgagc
ggcgaggcctggagctgtggcagctgttga
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