Ictalurus punctatus (channel catfish): 108255168
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Entry
108255168 CDS
T04658
Symbol
brpf3a
Name
(RefSeq) bromodomain and PHD finger-containing protein 3 isoform X1
KO
K11350
bromodomain and PHD finger-containing protein 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108255168 (brpf3a)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
108255168 (brpf3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H_2
EPL1
Bromodomain
zf-HC5HC2H
PWWP
PHD_2
PHD
FYVE_2
PHD_NSD
C1_1
Motif
Other DBs
NCBI-GeneID:
108255168
NCBI-ProteinID:
XP_017306404
Ensembl:
ENSIPUG00000015329
UniProt:
A0A2D0PIP4
LinkDB
All DBs
Position
21:complement(446245..484035)
Genome browser
AA seq
1168 aa
AA seq
DB search
MKKLRRRSCQIAFGRRRSSSSNHTDQDILLRSPSPCRLNFSLSRDTLTYAQSQKMLEVEL
EGRVHQINVSDPLKVITEDEMLAQDLAECNSNKENSEQIASYAQRDHTVSSYKDRRKENK
HGGRSRHSGGHHYTHNHLSSSYHTQLVSSLPKPTFHWVDTYAPSEARPLPVAYYRYVEKS
NEELEMETEYDMDEEDMAWLEIVNQKRVSDGHASVSPDTFELLIDRLERESILESRSQVL
SQSAIDEDAFCCVCLDDECLNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRCCLQSPS
RPVDCVLCPNRGGAFKQASDGRWAHVVCAIWIPEVCFANTVFLEPVEGVNNIPPARWKLT
CYLCKQRGRGASIQCHKANCYRAFHVTCAQRAGLFMKIDPVCETGTNTTFTVKKTAFCGN
HSPFGAQMGYSEVAGGFVGGRGQRSYTLGPAVQQNQHGSKKGSVAQQQKKTRKNANGVSR
KSAVPLLLVPQIPSYRLNKICTGMPVQRKNQFMQRLHNYWLLKRHSRNGVPLIRQLHSHL
QVQMNKKPDAKVQALRLELKYWQKQRQHLEKARLLIELIHKRERLKREQLKLQQMSLELQ
LTPALVLLRSTLEQLQEKDTACVFISPVNLSEVPDYLEFVAEPMDFSTMREKLEAHKYCS
VADLEADFNLMVSNCLRYNSSDTVFHKAAMQLKEVGGVILRHAQRQALSTGFELSTGMHL
PDSASKVKSNQSCWDKVDMLLDPGNRFHMSPETHLRQLLETLDMVTSMCASRGRTKRMRL
LRREINSIRDKLSCHRRTSRLLSGNIKKEDKHKEEGRNETINYATAIPGDALPNAPVFCL
ETGGRTTHGQIYKRQGCRGRGRGRGKVKPPSEASAHTEVKDDTLHLKERHTLAMSSQEET
AIRVSSLDSSPILPKLGVGRRTSILFKKAKNGAKLTKSMLFSLQNRVTADQTSEKLSDHR
SQPSLICTPPTPKFPSKENGLTNGLKKQKNRTPESESCSTAHQNTSSPPKFSQGDPSLNK
VPVGEGENTKADSETNLEPLSLVWAKCRGYPSYPAMMVDPDLPKERILPNGIVVPVPPQE
VLKLGERRRMETEDKLFLVLFFDTKRTWQWLPMGKLHPMGIDDTVDKLHLMEGKKPTVRK
SVHMAYERAMKHLSNVHEKRNFSPPSYI
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagctaaggagacgaagttgtcaaattgcattcggcagaagacggagcagttcc
tccaaccatacagatcaggatattcttctccgctctccctccccatgtaggcttaatttc
tccttgtccagagacacactcacatatgcccagtctcagaaaatgttggaggtagaactt
gagggaagagttcatcagattaatgtttctgacccactcaaagtcatcacagaggatgag
atgctggcgcaggacctggcagagtgcaacagcaacaaagagaacagcgagcagattgca
agctatgctcagcgggaccacacagtctcatcatataaggacaggaggaaagaaaacaaa
catggtggcagaagtagacattctggtggccaccactacacccacaaccatttgagctca
agttatcacactcagttagtgagctctctacctaagcccaccttccactgggtggacacc
tacgcaccatcagaggctcgtcctcttcctgtggcctactaccgttatgtggagaagtcc
aatgaggagctggagatggagacggagtatgacatggatgaggaagacatggcttggctg
gagattgtcaatcagaaacgtgtatcagatgggcatgcctcagtctctcctgacacattt
gagttactgattgacaggttggagagggaatctattctggagtcccggagccaagtcttg
tcccagagcgccattgatgaagatgctttctgctgtgtgtgcctggatgacgagtgcctt
aacagcaatgtcatcttgttttgtgacatctgcaacttggctgtgcaccaagagtgttat
ggtgttccctacatacctgaaggccagtggttatgccgctgctgcctgcagtccccttct
cggcctgtggactgtgtcctttgcccaaatagaggaggtgcttttaaacaggccagcgat
ggccgctgggcccacgtagtttgtgctatctggatccctgaagtttgctttgctaacaca
gtattcctagagcctgtagaaggagtgaataacattccccctgcaagatggaaactcact
tgctacctgtgcaaacagagagggaggggggcatccattcagtgccataaggccaactgt
taccgagcatttcatgtcacctgcgctcaacgggctgggctcttcatgaagattgaccca
gtctgtgagactggcactaacaccacattcactgtgaagaagactgccttctgtgggaac
cattctccttttggagcacaaatggggtacagtgaagtggctggaggctttgtagggggt
aggggtcaaaggtcatacactctaggacctgcagttcagcaaaatcagcatgggagcaaa
aagggttcggtcgcacagcaacaaaagaagacaagaaagaatgcaaatggagtgtcacgc
aagtcagcagtgcctctactccttgtgccccaaatcccttcctacaggcttaataagatt
tgcacaggcatgccagtacagaggaagaaccagttcatgcagaggcttcataattattgg
ctgctaaaacgccattcccgcaatggagttccactcatccgtcagctccactcacaccta
caagttcagatgaataaaaagccggatgccaaggtgcaggcattgaggttggagctaaaa
tactggcagaagcagcggcaacacctagagaaagctcgactcttgatcgagctcatccac
aagagagagaggctcaaacgtgaacagctaaaactgcagcagatgagtttggaactccag
cttactccagccttagtactgctgcgctccacactggagcaactgcaagagaaggacact
gcttgcgtcttcatttcacctgtcaatctgtctgaggttccagattatctggagtttgtt
gctgagcccatggacttctctaccatgcgtgagaagctggaggcacataagtactgctct
gtggcagatctggaagctgacttcaacttaatggtgtctaactgcctgaggtacaattcc
agtgacacagtgttccacaaagctgccatgcagctcaaggaggtgggtggtgtcatcttg
cggcatgcccagcgccaggctcttagcacaggctttgaactttctacaggcatgcatctt
ccagactcagccagcaaagtgaagtccaaccaatcctgttgggacaaggtggacatgctt
ttggaccctggaaatagattccacatgtctccagagacccacctgagacagctgcttgaa
acactggacatggtgacctccatgtgcgccagtagaggacgcactaaacgtatgcgactg
ctgcgcagggaaatcaacagtatccgggacaagctcagctgccaccggcgaacttcacga
ctgctcagtggtaacatcaaaaaggaagacaagcataaggaggaaggacggaatgaaaca
attaattatgcaacagccattccaggggacgccctaccaaatgctccagtcttctgcctg
gaaacaggaggaaggaccacccatggccagatttataaacggcaaggatgcagaggcaga
gggagaggcagaggaaaggtgaaacctcccagtgaggcttctgcccatacagaagtaaaa
gatgatacactccatctgaaggaacgacacactctggccatgtcctcacaagaggagact
gctatcagagtttcctctctggacagttcaccaattttgcccaagttgggtgtaggccgc
cgcacatccatactattcaagaaagctaaaaatggagccaaactgaccaaaagcatgctg
ttttcactccagaacagagtcactgctgaccaaacaagtgaaaaactgtcagatcataga
tctcagccaagcctcatttgcacaccaccgaccccaaaatttccttccaaagagaatggc
ttgacaaatggtcttaaaaaacagaagaatagaaccccagagtcagagagttgctctact
gctcatcaaaacactagttcacctcccaaattcagtcaaggcgacccatctttaaacaag
gttccagttggggagggagagaacacaaaggctgattcagagaccaatctggagcctctc
agcttggtttgggctaaatgcaggggctacccctcatatcctgctatgatggtagatcct
gacctgcccaaagaacgaattcttcctaatggcatcgtagtcccagtaccaccgcaggaa
gtgctgaaattgggtgagcgcagacggatggaaacagaggacaagctattccttgtgctg
ttctttgacacgaaaagaacttggcaatggctaccaatgggcaaactccatccaatgggg
attgatgacactgtggataaacttcacctgatggaaggcaagaaaccaactgtacggaag
tctgtacacatggcatatgagcgtgcaatgaagcacctcagcaatgtgcatgaaaagagg
aacttcagccccccctcttacatttaa
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integrated database retrieval system
