Ictalurus punctatus (channel catfish): 108255172
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Entry
108255172 CDS
T04658
Symbol
si:dkey-49n23.1
Name
(RefSeq) semaphorin-3D
KO
K06840
semaphorin 3
Organism
ipu
Ictalurus punctatus (channel catfish)
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GFIT
Motif
Pfam:
Sema
Ig_6
Ig_SEMA-3_4_7A
Ig_3
PSI
I-set
ig
Ig_2
DUF5960
Motif
Other DBs
NCBI-GeneID:
108255172
NCBI-ProteinID:
XP_017306410
Ensembl:
ENSIPUG00000008545
UniProt:
A0A2D0PIQ3
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Position
21:5500174..5564233
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AA seq
764 aa
AA seq
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MRCAGFWRTGHICPLLAMLFQLLLPAVRADRAWNQYIPRLQLSHTELRTRNSSAMFWHSG
AVVNGYYEVLLLDEDRGWLLVGGRDHVYMLDSESLTQTIHKIHWPAGREHTERCKHAGKN
LLTDCANFVRLLQPFNKTHVYACGTGAYHPVCTYIDLGHNVEEPALRLLSNAVESGRGKC
PFSPHEPFSARLTDGDLYAGTSVDFMGNNAAIFRSSVHTTSQHYIRTEAHNDHWLNEPEF
VGSFSIPDTHSQDDDKVYFFFKETAVESNQLDKRIYSRVARVCKNDMGGKRSLINRWSTF
LKARLVCSVSAPGGMDTYFDELEDIFLLETKDPQNPVIYGVFSTSSSVFRGSAVCVYSMA
SIRAAFNGPFAHKEGPDYRWVEYKGRIPYPRPGTCPSETYDPLHKSTRDFPDEVMSFMRA
HQLMWEPVVPIHRRPLFTHINTPYRLKKLVVDRVDAEDGQYNVLHLGTDDGKVLKVVSIP
KENWETEEIILEELSVFQSPILSMELSTKRQALFVSSADAVARLPLQRCELYGKACVDCC
LARDPYCAWDGTTCTNYFPTNKRRSRRQDVRYGDPWSQCQDLGDGSEEIELKVVYGVENN
STFLECTPASPQARVKWIMQQKHSQSTKELLPDEDIILTKRGLLLQRITSSNAGLYLCTA
HEHSFSRTLARYELQVISEQHVTNTRSTHHSDPKMGGNYAASSLSYKDLHLISVSGLTAD
DYCEQLWYREKRRQQKLRTLKWKQTAENRKARVRRQNPPNEPLQ
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgtgcaggattctggaggacggggcacatctgtccgctgctggcaatgctgttt
cagttgcttctgcctgccgttagagccgatagggcctggaaccagtacataccacgactg
caactctcacatacagagctgcgaacaaggaacagttcagccatgttctggcacagtggt
gcagtggttaatgggtattatgaagttctgctgttggatgaggatcgtggttggctgctg
gttggaggaagagaccacgtctacatgctcgactctgagagtctgacccagactatacac
aagattcactggccagctggaagagaacatactgaacgctgcaaacatgcaggaaagaat
ctgttgactgactgtgccaattttgtgaggctccttcaaccattcaacaaaacacatgtg
tatgcatgtggaaccggggcgtaccaccctgtgtgtacatacattgacctgggccacaat
gtcgaggaacctgcgcttagactgctgagcaatgctgttgaatccgggagagggaaatgt
ccctttagtccacatgagccgttctctgctcgactcactgacggagacttgtatgcagga
acgtcagtggacttcatgggaaacaatgcagccatatttcgtagctctgtgcacacaacc
agtcagcactacattcgcaccgaggctcataatgaccactggctcaatgagccagagttt
gtgggctcgttctccatcccagacacacacagccaagatgatgataaggtgtatttcttc
ttcaaggaaacggctgtggagtccaaccagctggataagcgcatctatagccgagtggct
agagtgtgcaagaacgacatgggtgggaagcggagtctgatcaatcgttggagtaccttc
ctaaaggccaggctggtctgctcagtgtcagcgccaggaggcatggacacatactttgat
gagctggaggatatatttctgttggagaccaaagatccacaaaatccggttatatatgga
gtcttctcaacttcaagttctgtcttccgaggctctgctgtatgcgtctattcaatggcg
tccatccgagccgctttcaatgggcccttcgcgcacaaagaaggccctgactaccgctgg
gtggagtacaaaggcaggatcccatatccacgtccagggacgtgcccaagtgagacgtac
gaccccttgcacaagtctacccgcgactttcctgacgaggttatgagcttcatgagagcc
caccaactgatgtgggagccagtcgtgccaattcacagacgaccactgtttactcacatc
aacaccccctacaggctgaagaagttggtagtggatagagtggatgcagaagatggccaa
tacaatgttctacatttgggtacagatgatggcaaggttctgaaggtggtatccattccc
aaggagaattgggaaactgaggaaatcatactggaagagctgagtgtgtttcagagtcct
atcttaagcatggagctctccaccaagaggcaagctctatttgtgagcagtgcagatgcg
gtggctcggttgcccctgcagcggtgtgagctctatgggaaagcctgtgttgactgctgc
ctggcccgggatccttattgcgcctgggatggcaccacctgcaccaattatttccccact
aacaagagacgttcccgtcgacaggatgtgagatacggtgacccatggagccagtgtcag
gatctgggagatggctctgaggaaattgagctaaaggtggtttatggagtagaaaacaac
tcaaccttcctggaatgcacacctgcttcaccacaagcgagagtcaaatggatcatgcaa
caaaaacacagccagagcactaaagagctgctccccgatgaagacatcatcctcacaaaa
cgaggtctcctcctgcagcggataacttcttcaaacgctggcctctacctgtgcaccgct
cacgagcactcattttcccgcacgctagctcgctacgagctgcaagtcatctccgagcag
cacgtaacaaatacacgtagcactcatcactctgaccccaaaatgggtggcaactatgca
gcatcctcgctgagctacaaggatctacatctgatcagcgttagcggtctaacagccgat
gactactgcgagcagctgtggtaccgcgagaagcggagacaacagaaactgcgcacacta
aagtggaaacaaacggcagagaaccgcaaggctcgagttcggcggcaaaatccacccaac
gaaccactccagtga
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