Ictalurus punctatus (channel catfish): 108255175
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Entry
108255175 CDS
T04658
Symbol
skib
Name
(RefSeq) v-ski avian sarcoma viral oncogene homolog b
KO
K26503
Ski oncogene
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108255175 (skib)
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Gene cluster
GFIT
Motif
Pfam:
Ski_Sno_DHD
c-SKI_SMAD_bind
Motif
Other DBs
NCBI-GeneID:
108255175
NCBI-ProteinID:
XP_017306420
Ensembl:
ENSIPUG00000024641
UniProt:
A0A2D0PMX0
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Position
21:complement(12259653..12304373)
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AA seq
670 aa
AA seq
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MEALSSFRPHAGLQQTLKQFHLSSMSSLGGPAAFSARWQHDTPFDKQGKKNADLPLLPSL
RIQAPSVLPGPLLVAADRSTERCETVLERETISCFVVGGEKRLCLPQILNSVLRDFSLQQ
INAVCDELHIYCSRCTAEQLEILKIMGILPFSAPSCGLITQTDAERLCNSLLHGGALPPR
PDKELACSSSSTTELEYTDRAFKVYHECFGKCKGLFMPELYTSPHAACIQCLDCRLIFPT
QKFVVHSHKRLENRTCHWGFDSSNWRAYILLDQDYAEKEEKATLQQFLNELKGKYDLGNK
HKSLSFREYSPIPNKKSKQEPSCSPSDDKEKQVEWLQCLATSANKDLKQVQIKQRPSAFR
PWSPRVPSTERAAPHHKHEKSLPKNPESLASSPVTTQKNKQPEQSGAGGSQPGYNPKSRP
AKCWPSGEDHAQPASCLANPPQYDSNSDAEIEVDNFDEVPCGHTFPNGVVMERYEGRHRR
TAAPGSELEAVQQMLYSNLSSREAREKFLQEIVHMQVEQEEKLIAALQAKHSLQQELEFL
RVSKKGRLREAIEAKRNLRKELERLRTECDRKVHDANESCGRLKRELEHERQMHVCDKGC
EQNQLRAKYSTQIEELQVKLQQAEADRDQLREELLQEHEARQSLEQVVLQLQQQLGHSNQ
KQGQLSQQQS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaggcattgtcaagcttccgacctcatgcgggacttcagcaaactctaaagcagttc
cacttgagctctatgagctcgctcggcggcccggcggctttttcggctcgctggcagcac
gacacacctttcgacaagcaggggaagaagaacgcagacctgccgctgctgcctagtctg
aggatccaggcgccgtcggtcctgcccgggccgctgctcgtcgctgcggatcgctccacg
gagcgctgcgagaccgtgctggagcgagagaccatttcgtgcttcgtggtgggcggcgag
aagcgcctgtgtttgccgcagatcctgaacagcgtgctgcgagacttcagccttcagcaa
atcaacgctgtttgcgacgagctgcacatctactgctcgcggtgcacggctgagcaacta
gagattctgaagatcatgggcatcttgcctttctcggcaccttcgtgcggactcatcacg
caaacagacgccgagcgcctgtgcaactccttactgcacggcggtgcactaccaccgcgc
cccgacaaggagctcgcgtgttcctcctcctccaccaccgagctcgagtacaccgaccgg
gcctttaaggtgtaccacgagtgtttcggcaagtgcaagggtctgttcatgcccgagctg
tacacgagtccgcacgcggcgtgtattcagtgcctggactgcagactcatattccccacg
caaaagttcgtggtgcatagccataagcgcttggagaaccggacatgccattggggtttc
gactcctccaactggagggcctacatccttttggatcaagattacgctgagaaagaggag
aaggccacactgcagcagtttctcaacgaattaaaggggaaatatgacctcgggaacaag
cacaagagcttatctttcagggaatatagtcccattccaaacaagaagtccaaacaggag
ccttcatgttccccatccgatgacaaagaaaagcaagtggaatggttacagtgtctggca
acatctgcaaacaaggatctcaagcaggttcagatcaagcagaggccatcggcatttcgg
ccatggtctcctagagtcccatccactgagagagcagctccccatcacaagcatgagaaa
tcactacccaaaaatccagagagtttggcatcatccccagtcactacgcagaagaacaag
cagccagagcagtctggtgcaggaggctcccagcctggctataaccccaagtcaaggcca
gccaagtgctggccatctggcgaggaccatgcacagcctgcatcctgccttgctaatccc
ccacagtatgactccaactcagatgcagagatcgaggtagacaactttgatgaggtgcct
tgcggccacacttttcctaatggagtggttatggagcggtatgagggcaggcacagacgt
acagctgcccctggctcagaacttgaagcagtgcagcagatgctgtacagcaacctgagc
tctagagaggccagagagaagttcctgcaggagattgtgcatatgcaagttgaacaagag
gaaaagcttatagcagctttgcaggccaagcatagccttcagcaggaactagagttttta
cgggtgagtaagaaggggcggttgcgggaggccattgaggctaagcgtaacctgcgaaag
gagctcgagcggctgcgcacagaatgcgacagaaaggtgcatgatgccaatgagtcgtgt
ggaagactgaaaagggagctggagcatgagcggcagatgcacgtgtgtgacaagggctgt
gagcaaaaccagctgagggccaagtactctacccagatagaagagctccaggtgaagcta
cagcaagccgaggctgatcgcgatcagctgcgagaggagctgctgcaagagcatgaagct
cggcaaagtctggagcaagtggtgctccagctccagcagcagctcggccatagcaaccag
aaacaaggccaacttagccaacagcaatcgtag
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