Ictalurus punctatus (channel catfish): 108255217
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Entry
108255217 CDS
T04658
Name
(RefSeq) something about silencing protein 10
KO
K14767
U3 small nucleolar RNA-associated protein 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108255217
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108255217
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sas10
Sas10_Utp3
Motif
Other DBs
NCBI-GeneID:
108255217
NCBI-ProteinID:
XP_017306478
Ensembl:
ENSIPUG00000014510
UniProt:
W5UDV2
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Position
21:complement(1097532..1110461)
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AA seq
473 aa
AA seq
DB search
MVRSKRVVRRPKANKVEEYDSDDSACYKNEEIPDKRSSKSVQDKIEHFHSTKISDLLAQG
VQLDSEQEDEADEEEVMPLTLEDSDDEEEEENSNNEEEEETDMESDLEGKRDDDLPNDMA
WGSKKRMYYDTDYTTKKGKPLEEVEAEDKEEEEEAKNIQKRLAANLSEEDYDLNLLQEFA
VEVEAEKTTEKEQVIVKDLNTMSKKEKLKLLKKESPELLELIQDFKAKLTELQHEIEPMV
QMVKDGQIPPGKGANYLMTKQQLYLNYCTNISFYLVLKAKRIQAHNHPVIERLVTYRNLI
NELGAVDAKLSPQLRQLLSERQEERAAKKPQSSKKDKREISKVADKQEAEESDLDEEAAL
LFYKGIEERLKRKRKNKRLPEDGSMIERDEAEEEAEMDGEAKRGITYQMAKNKGLTPKRK
KIDRNPRVKHREKFRRAKIRRKGQVLDVRREETRYTGELSGIRAGIKKSIKLK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggttcggtcaaaacgagtcgtgcgaaggcccaaagcaaataaggtagaggagtacgac
agtgacgattctgcctgctataaaaacgaggaaatcccagataagcgatcatccaagagt
gtgcaggataaaatagaacatttccacagtacaaaaatctcagatcttttggctcaaggt
gtgcagctggacagtgaacaagaggatgaggctgatgaggaagaggtgatgcccctgaca
ctcgaggactcggatgatgaagaggaagaggagaatagcaacaatgaagaagaagaagag
accgatatggagagtgatctggaaggaaaaagggatgatgatctgccaaatgacatggcc
tgggggagcaagaagagaatgtactatgacactgattacaccactaaaaaaggaaagccg
ttggaggaggtagaagcagaggataaggaggaagaagaagaagccaagaacattcaaaaa
cgattagcggccaacctgagtgaggaagactacgatctaaacctgctccaggagtttgca
gtagaagtggaagctgaaaagactacagagaaggagcaggtgattgttaaagacctaaac
acaatgtcaaagaaagagaagctcaaactgctgaagaaggagagtccagagctcctggag
ctcattcaggatttcaaggctaagctgacagaactgcaacacgagatagagcccatggtg
cagatggtaaaagatggacagattccaccaggaaagggggcaaattacctcatgaccaag
cagcaactttatcttaactattgcacaaacattagtttttacctggttttaaaagccaag
agaattcaagcacataaccatccagtgattgagcgattggtgacctacagaaacttaatc
aatgaactaggagctgttgatgccaaactctcccctcaactgcgccagctgctttctgaa
aggcaggaggagagagcagctaaaaaaccacagagcagcaaaaaagacaagcgtgagata
tcaaaggtggcagataagcaggaagctgaagagtctgacttggatgaagaggcagccctg
ctcttctacaaaggcatcgaggagagactgaagcgaaagagaaagaacaagaggctgccg
gaggacgggtcaatgatcgagcgggacgaggcggaagaagaagcagagatggacggagag
gctaaaaggggcattacctaccagatggccaagaacaaaggactcacgccaaagaggaag
aagattgaccgcaatcccagagtcaaacacagagagaaattcagacgtgccaagattcgc
cggaagggtcaggtcctggatgttcggcgcgaggagacgagatacaccggagaactatct
ggaattcgtgctggaattaaaaagagtatcaagctcaagtga
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