Ictalurus punctatus (channel catfish): 108255221
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Entry
108255221 CDS
T04658
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04514
Cell adhesion molecule (CAM) interaction
ipu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108255221 (nfasca)
04517 IgSF CAM signaling
108255221 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108255221 (nfasca)
Cell adhesion molecules [BR:
ipu04515
]
Immunoglobulin superfamily
L1 family
108255221 (nfasca)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
Ig_6
Ig_PDGFR_d4
Ig_5
Fn3_ROS1
Ig_MYOM1
Motif
Other DBs
NCBI-GeneID:
108255221
NCBI-ProteinID:
XP_053530058
Ensembl:
ENSIPUG00000024535
UniProt:
A0A9F7QP87
LinkDB
All DBs
Position
21:complement(12538514..12625906)
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AA seq
1194 aa
AA seq
DB search
MWKQGQWTPLAVLSIIVLLWKEVAPINVPPDPRIQQDLKQPPTIVTQSAKYYIVDPRDNI
IIECEAKGNPVPTFWWRRNGKFFNVEKDPRVSMRKRSGTLEISFRNGGKPDDYEGEYQCF
AMNDFGTAISNKILLRVSKAPLWPKEVLEPVVVSEGSSLVLACNPPPGLPPPKTFWMNSG
MGNIEQDARVSMGLNGDLYFSNVLAKDANTDYSCNARFLFTHTIQQKNPFILKVQTKEPY
NDTVYSSNDTYIYGARNIQESTPTFLSPSGISSSKMVLRGEELLLECIAAGVPTPRIKWF
KKGGDLPERKARFENFNKTLSIVSVSDEDSGDYICMASNKMGSIRHTISVQVKAAPFWLH
KPSNLVLAPNENGQLQCLASGNPKPSIQWLVNGEPIESSLENPSREVVGDAIIFSSVQIG
TSAVYQCNASNEHGYLLANAFVNILDMAPRLLGPKNQLIKVIESKQAFLDCPFFGSPYPF
VRWFKNGQGIAPNVGKYSLHENGTLEIKRVRPEDQGTYTFVASNILGKAEDQVRLEVKEP
TRIVRVPEDLSANRGSVARFDCKIKHDSTLPITVTWLKNDKPLHFAWLSKFKKEEDALSF
SNIQPDDEGTYTCTVTTELDQDSASARLTVLEDESLAPSKTSAVAAVPDPPQDLELSDLS
ARSVRLTWIPGNENNSPVTKFLVQYEENRWRPGEWQNLSSYAGDQNSVNLNLSPFVNYQF
RVIAINSVGLSRPSQPSARYQTSGAPPYVYPNGLKGWGTKKTNMEITWQPLLDNQRNGPD
LRYVVSWRRKDLEEEWNNITTTNTKHVVGDTDTYVPYEIKIQAVNDFGAGPESNIVIGYS
GEDRPTEAPGDLRVTKTNSNKVNVNWSPVEAKSINGEFKEYRLYYWREASLVKDLKVNKD
KKTKGFFSDVSQNSGVLMDLVPYSKYKMYMVVANNKFEGPHSNTVEFQTKEGLPGAPKFF
RIVQRNATTIRLEWNKPLEPNGILIGYTLQYKTVNGTEEGKLQVLSFFPNETEYTMRLPD
RFTRYKFYLSARTQVGSGEVYAEESPHFANEAYITDQVDIATQGWFIGLMCAIALLILIL
LIVCFIKRSRGGKYPVRDKKDLPLDPVDHKDQDGSFDYHSDEDNKPLQGSQTSLDGNVKE
SDDSLVDYGEGGDGQFNEDGSFIGQYTVRKDKEETEGNESSEATSPVNAIYSLA
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagcaggggcagtggactcctctggctgtgctgtcaatcattgtgctgctgtgg
aaggaggtggctccaatcaatgtccctccagacccaagaatccagcaggacttgaaacag
ccccccactattgtcacgcagtcagcaaagtactatattgtggatccccgagataacatc
atcattgagtgtgaggccaagggcaatcctgtaccaacgttttggtggagacgaaatggg
aagtttttcaatgtggagaaggatccacgtgtgtccatgaggaaacgctcaggcacactg
gagatcagcttcaggaatggtggaaagcctgatgactacgagggagaataccagtgcttt
gctatgaatgactttggcactgccatatccaacaaaatactgctacgagtttccaaggca
ccgctgtggcccaaagaggttttggagccagtggtagtaagcgagggatcatctctggtc
ctggcctgtaacccacccccaggccttcccccacctaaaacattctggatgaacagtgga
atggggaatatagagcaggatgctcgagtgtccatgggtctgaatggagatctttacttc
tctaatgtgctcgctaaggatgctaacactgactacagctgcaatgcccgatttctcttc
acacacaccatccagcagaagaatccttttattctcaaagtgcagacaaaggaaccttat
aatgacactgtttactcttcaaacgacacttacatatatggtgcacgtaacattcaagaa
tcaacaccgacttttctctctccctcgggaatatccagctccaagatggttctccgcgga
gaggagcttctcttggagtgtatagctgctggagttccaactcctagaatcaaatggttt
aagaaaggaggggatttgccagagagaaaggccagatttgagaacttcaataaaactctg
tctatagtgtctgtgtcagatgaggattctggagactacatctgcatggccagtaataag
atgggcagcatccgccacactatctccgttcaggttaaagctgctccattttggctacat
aagccatctaacctcgtgttagctcccaatgagaatggccaactgcagtgtttagccagt
ggaaaccccaaacccagcatccagtggcttgtaaatggagagccgatagagagttcactg
gaaaatccaagcagggaggtagttggtgatgcaatcatcttcagctcagtgcaaattggc
accagcgctgtataccagtgcaatgcctcaaacgaacatggctacctgctggccaatgct
tttgtcaacatactagatatggcaccacggttactgggccccaagaaccagctgattaag
gtgattgagagcaaacaagcctttctggattgtcctttttttggctcaccttacccattt
gtgcggtggtttaagaatggccagggtatagctccaaatgttgggaagtacagcttgcat
gaaaacggtaccctggagatcaagcgagttcgacctgaagaccagggaacttacactttt
gtggcaagcaacatcttgggcaaagctgaagatcaggtccgtttggaagttaaagagccg
acgcgaattgtccgagttccagaggacctctctgccaacagaggaagtgtggctcgtttt
gattgcaagattaaacacgattccacactccccattacggtcacctggctcaaaaatgac
aagcccctgcattttgcttggctgagcaagtttaagaaggaggaggacgcgttatccttt
agcaacatccagcctgatgatgagggaacatacacttgcacagttaccacagagttagac
caggactctgcctcggcccgccttactgttttagaggatgaatccctagctccctctaaa
actagtgctgtagcagctgttcctgatcctcctcaggatctggagttgtctgatctatca
gcacgctcagtccggctcacttggatccctggcaatgagaacaacagtcctgttacaaaa
ttccttgttcaatatgaagagaaccggtggagaccaggcgaatggcaaaatctgtccagt
tacgcaggtgatcagaactctgtgaacctgaatctgtctccgtttgtgaactaccagttc
agagtgatcgccatcaacagtgttggtctgagccgtccaagccagccatcagcccgctac
cagaccagcggagcacctccttatgtttatcccaatggccttaaagggtggggtaccaag
aaaaccaacatggagatcacttggcagccccttcttgataaccaaaggaatgggcctgat
ctacgttatgtggtctcatggaggaggaaggacttggaggaggaatggaataacatcacc
actaccaatacaaagcatgtggtcggtgatacagacacttatgtcccctatgagatcaag
atccaggcagtcaatgactttggtgcaggccctgagtcaaacatagtgattggctactca
ggggaggacaggcccacggaggcacctggagacctcagggtgacaaagacaaacagcaat
aaagtgaatgtaaactggagccctgtcgaggccaaatccattaatggagagtttaaagag
tacaggctatattactggagggaggccagcctggtgaaagacttgaaggtgaataaggac
aagaaaacaaaaggtttcttcagcgatgtgtctcagaacagtggcgtcctaatggacctt
gtcccttatagcaaatacaagatgtacatggtggtggccaacaacaaatttgagggacca
cacagcaacactgtggagtttcagaccaaggaaggcttgcctggcgctccaaagttcttc
aggattgtccagaggaacgccaccaccattcgcctagaatggaataagcctctggagccg
aatggcattctgatcggatacacgctccaatacaagacagtgaatgggacagaggagggc
aagcttcaggtcctgagtttcttccctaatgagacagagtacaccatgcgcctgcctgac
cgctttactcgctacaagttctacctgtctgctcggacgcaggtcggctctggtgaggtc
tatgctgaagaatcgcctcactttgccaatgaagcctacattacggaccaggtcgacatt
gccacgcaggggtggttcattggtctcatgtgtgccattgcactcctcattctcatcctg
ctcattgtttgctttatcaaaagaagccgaggagggaaatatccagtgagagataaaaag
gacctccctttggatcctgtggaccacaaagaccaggatggatcatttgattaccacagc
gatgaggacaacaagcctttgcagggaagtcagacctctctagacggcaacgtcaaggaa
agtgacgacagtctagtagactacggagagggaggggatggccagttcaatgaggatggc
tccttcataggccagtacacagtcaggaaggataaggaggagacggagggcaacgagagc
tcagaggccacatcacctgtcaatgccatctattctctggcgtag
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