Ictalurus punctatus (channel catfish): 108255234
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Entry
108255234 CDS
T04658
Name
(RefSeq) peripherin
KO
K07607
peripherin
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108255234
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
108255234
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Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
ZK652
CCDC57_N
PMD1-like
KASH_CCD
CCDC39
KIF21A_4th
DUF7491
GAS
TetR_C_31
SOGA
CEP89
CCDC89
CENP-H
Motif
Other DBs
NCBI-GeneID:
108255234
NCBI-ProteinID:
XP_017306539
Ensembl:
ENSIPUG00000012706
UniProt:
W5U5P3
LinkDB
All DBs
Position
21:2640609..2653855
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AA seq
454 aa
AA seq
DB search
MSHLTSRTSYRRTFGGPTPMSAMPAYTSYSSRYMSPAPASVSTRTFRVRSSAPSVPHVSY
DKVDFALADSINQEFRSTRSNEKQELQELNDRFASFIEKVRYLEQQNATLTHELNQYKGK
QQQGQSNRASQLCQQEMRELRRQVDLIGKERDQIQVDRDNMAEDLALLKQRLDEETQKRQ
DAENQLVLFRKDVDDATLARLELERKIESLMDEIEFLKKMHDEEIQDVQVSYETQQMKME
VEATVRPDLTAALRDIRAQYESIATKNMQESEEWYKSKFTDLTDSAKRNADATRQAKQEA
NEFRRQIQSLSCEIDALKSTNEALLRQMREMEDQFGVEAGNYQDNINRLEEEIHHLKDEM
SRHLREYQDLLNVKMALDIEIATYRKLLEGEESRITIPVMNITSMSMRSGDYDLPTDVVH
GKKVVIKTVETRDGEVVKESRKEKDTPRDSKESN
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacttgaccagccgcacttcctaccgccgcacttttggtggacctacccccatg
tccgccatgcccgcctacacctcgtactcgtcccgttacatgagcccggctccagcttct
gtgtccacacggactttccgggtccgctccagtgctccgtcggttcctcacgtctcttat
gacaaagtggacttcgccctggctgatagcatcaaccaagagttccgcagcacacgcagc
aatgagaagcaggagctgcaggagttgaacgaccgcttcgcgagcttcatcgagaaagtg
cgctacctggagcagcagaatgccacgctcacccacgagctcaaccagtacaagggcaaa
cagcagcagggccagtcaaaccgcgccagccaactctgccagcaggagatgagggagctg
cgtagacaggttgatctcattgggaaggagcgagatcagatccaggtggacagagacaac
atggctgaagatctggccttgctcaagcagaggttggatgaggagactcagaaaagacaa
gatgctgagaaccaactggtcctgttccgtaaggatgtggatgatgccactttggcccgt
ttggagctggagcggaaaatcgagtctctgatggatgagattgaatttctcaagaagatg
catgatgaggaaatccaggatgtgcaagtgagctatgaaacccagcagatgaagatggag
gtggaggccacagtccgtcctgacctgactgcggctctgagagacatcagggctcaatat
gaaagtattgcaacgaagaacatgcaggagtctgaggagtggtacaaatccaagtttact
gacctgaccgactcagccaagcgcaacgctgatgccacgagacaggccaagcaggaggcc
aacgagttcaggaggcagattcagagcctcagctgtgagattgatgcccttaagagcacg
aatgaggctctgctgaggcagatgagggaaatggaggaccagtttggagtggaggctgga
aattaccaagacaacatcaaccgtctggaggaagagatccaccacctgaaggacgaaatg
tcccgtcacctgagggaatatcaggacctgcttaatgtaaagatggccctggacattgag
attgccacttacaggaagttactagaaggagaggaaagcagaattactattcctgtcatg
aacataacgtcaatgagtatgcgcagtggcgattatgacctacccactgatgttgtacat
ggcaaaaaagttgtgatcaaaactgttgagacccgtgatggagaggtggtgaaggagtcc
aggaaggagaaggacaccccacgagattccaaggaatctaactga
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