KEGG   Ictalurus punctatus (channel catfish): 108255243
Entry
108255243         CDS       T04658                                 
Name
(RefSeq) coilin isoform X1
  KO
K13150  coilin
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ipu03041]
    108255243
Spliceosome [BR:ipu03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    108255243
SSDB
Motif
Pfam: Coilin_N Tudor_Coilin
Other DBs
NCBI-GeneID: 108255243
NCBI-ProteinID: XP_017306556
Ensembl: ENSIPUG00000001290
UniProt: A0A2D0PMA4
LinkDB
Position
2:complement(12538748..12548815)
AA seq 659 aa
MYKLFLRSHGNMAASSLNAVRVRLYFDYPPPSMPDCRMSWVLVDLNKCRVVADLCSVIRQ
KFDYSRKTVLDLFIENCFLPPAENIYLVRDNDSIRVKVSSVYSECVGKKRCREEEGSFQA
PAKKNRHEENGVAQAAGATKKKKRHKAKKKKRDEKQLESGDAFKAAFPDKEPSSSKAQTE
KSSKKASASSVLTNGKAISSGPHNKSSDSSDSSEEVTQKPSPLKSKSKHTQVAASKRHAV
RKTSSSDSSSSEDEKVLVKKPPKPCTSLKTCTSTKTSKEQTSSVAPKSTTNSTAAKKTQK
ESSSDSSSSDDEASAAARRANVPAKSTTTASKPQPQTTAASSSEEDDSRKGGSKTASLLQ
TGPPLSSRQGEASKNPMSKKPSANSKTSKTQTTTSDSSSSSEDEACKANVPTTPKPFKTA
RAQTQPCSDPCAVVENGVIWTPSTPVGTMVQDNKDKAESSESCSSDTELVIKRPNPLLVA
GLTPRGRGRGFPDRVKGRGGVRGGFGRARGTPWKQNFHHDYDNEVQRKQKEIQTNKSLVL
QNPPEPSPKRDYSTLPLLAAPPAVGQKIVFKLLELTENYTPEVSDYKEGKIIGFNHSTNM
IELELLMQSQARTEPGKFDLVYQNPDGTERVEYAVTLGSQLTERWESLLEPRLIVQNTD
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgtacaagctcttcctgcgttcacacgggaacatggcggcctccagtctcaacgcggtt
cgagttaggttgtattttgattaccctcctccttccatgcccgactgccgcatgagctgg
gtgctggtggatttgaataaatgccgtgttgttgcagatttgtgcagcgtgattagacaa
aagttcgactacagccgcaaaacggtgttagacttgttcattgagaattgtttccttcct
cctgctgagaacatctatttggttcgtgataatgacagcataagagtgaaggtgtccagt
gtttatagtgagtgcgtagggaaaaaaagatgcagagaggaagaaggctcatttcaagca
ccggcgaagaagaatagacacgaggagaacggtgtcgcccaagcagcaggcgcaacaaag
aaaaagaaaagacacaaagcgaagaagaagaagagggacgagaagcagttggagtctgga
gatgcctttaaagcagccttccctgataaagagccttcatcctcaaaggcacagactgag
aagagcagcaagaaagcttcagcatcttctgtccttactaacggaaaagcgatttcatca
ggtccgcataataaaagctcagactcttcagacagcagtgaggaggtcactcaaaaacct
tctccactcaaatccaagtccaaacacacacaggttgcagcatccaaacggcatgcggtg
agaaaaacctcttcctcagattcatcctcgtcagaagacgaaaaagtccttgtgaaaaaa
cctccaaaaccatgtacaagcttgaaaacctgtaccagtactaagacatccaaagagcag
acgtcttctgttgcacccaaatccactacaaactctacagcggccaagaaaacacaaaaa
gagtcttcttcagattcgtcctcgtcagatgatgaagcttcagcagcagccagaagagca
aacgtccctgcaaagtccacgaccactgcctcaaaacctcaaccccaaaccacggcagca
tcatcctcagaagaagatgattccagaaaagggggttctaaaacagcgtccttactgcaa
acagggccacctttgtccagtcgtcaaggtgaagccagcaaaaaccccatgtccaaaaaa
ccttccgcaaactctaaaacgtccaaaacacaaacaacaacttcagattcctcctcgtcc
tctgaagacgaagcctgcaaagcaaacgtccctacaacacccaaaccctttaaaacggca
cgagcacagacgcagccatgctcagacccatgtgctgtggtggagaacggcgtgatttgg
actccgtccactccagtaggaacgatggtccaagacaacaaggacaaagcggagagctct
gagtcgtgcagcagtgacacggagctggtgataaagaggccgaatcctctgcttgtggct
ggtttgacccctcggggaaggggccgggggttcccggacagggtcaaaggtcgaggaggg
gtcaggggtggctttggcagggccagaggaacgccttggaagcagaactttcaccatgac
tatgacaatgaagtgcagaggaagcagaaagagatccagactaacaaaagcttggtgctg
cagaatcctccagagccaagccccaagcgggattacagcactctgcctctcctcgctgct
cctcctgcagtgggacagaaaattgtttttaagcttttagagctcactgagaactacacc
ccagaagtgtcggattataaagaagggaagatcattggttttaatcacagcactaacatg
attgaactggagcttctgatgcagagtcaagcccgaactgaacctgggaagtttgatctg
gtgtatcagaacccagatggcactgaaagagtggagtacgcggtcactcttggttctcag
ctgactgagcgttgggagtcgctgctcgagcccaggctaattgtgcagaacacagactga

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