Ictalurus punctatus (channel catfish): 108255246
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Entry
108255246 CDS
T04658
Name
(RefSeq) prolargin
KO
K08125
prolargin
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ipu00535
]
108255246
Proteoglycans [BR:
ipu00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
108255246
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_6
LRRNT
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
108255246
NCBI-ProteinID:
XP_017306557
Ensembl:
ENSIPUG00000024045
UniProt:
W5UEX0
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All DBs
Position
21:complement(14311927..14317860)
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AA seq
373 aa
AA seq
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MKAELGYCSLLLLLLTVDVWGQQTRPRPRPRPKPPTTRRPPKKEPEPMEPTDFPPVIIGP
PSSFPDCPRECMCPASFPNALYCENRNLRRVPVIPPRTHYLYLQNNYIDSVTADSFNNAT
ELKWINLGNNRIRSIEKQVFEKIPNLLHLYMQKNFLKEVPSNLPSGLEQLRLSRNQISKI
APGTFNKMEHLVLLDLHHNRISDSNLAKNIFKDLKNLVQLNLAHNILRKMPANIPNSIAQ
LFLDRNNIEDIPQDYFKDFTNLAFVRLNFNHLTDKGLPKMVFNVSTLMDLHLAHNNLTTV
PLFNTHLEHLHLNNNNIESINGTAICPFTLTEDVHDPDSVPRLRYLRLDGNHLTPPIPLD
VIMCFRHLHSIVI
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctgagctaggatactgctctctgcttcttcttctccttactgtagatgtttgg
ggacagcagaccagaccccgacctcgacctcgaccaaaacctcccaccaccaggaggcct
cccaagaaagaaccagaacccatggagcccactgactttcctcctgttatcattggtcct
ccttcttcattcccagactgcccaagggaatgcatgtgccccgcttccttcccaaatgcc
ttgtactgtgagaaccgcaacctccgcagagtcccggtcatcccgcctcgcacccactat
ctctacctacagaacaactacattgattcagtgactgcagattcctttaacaatgccaca
gagctcaagtggataaacctggggaataatcggattcggtctatagagaaacaagtgttt
gagaagattccaaacctgctgcatctatatatgcagaagaactttttaaaggaagtccca
agcaatctgcctagtggtttggagcaactacgactcagtcgcaatcagatctcaaagatc
gctcctggaacgttcaacaagatggaacaccttgttcttctggacttgcatcataacagg
atcagcgacagcaacctagccaagaatatctttaaagatcttaaaaatctggtacagctt
aacctggctcacaacatcctgaggaagatgcctgcaaatatacccaacagcatagcccag
ttgttcttggacaggaacaacattgaggacattccccaggactattttaaggacttcacg
aacctggcctttgtcagacttaacttcaaccacttgactgacaagggcctcccaaaaatg
gtattcaatgttagcacactgatggatttgcacttggcgcacaacaatctgactaccgtt
ccactgttcaacacccacctggagcatctacaccttaacaacaacaatattgagagtatc
aatggaacagcgatctgtccttttaccctgactgaggatgtgcatgatccagacagcgtg
cccaggctgaggtacctccggctggatggtaaccacttgaccccacccatcccactggac
gtcatcatgtgttttagacatctccactcaatagtgatttag
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