Ictalurus punctatus (channel catfish): 108255331
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Entry
108255331 CDS
T04658
Symbol
rasgrf2b
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 2 isoform X1
KO
K12326
Ras-specific guanine nucleotide-releasing factor 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108255331 (rasgrf2b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
PH_11
IQ
DUF2443
Motif
Other DBs
NCBI-GeneID:
108255331
NCBI-ProteinID:
XP_017306723
Ensembl:
ENSIPUG00000018821
UniProt:
A0A2D0PJF0
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Position
22:complement(6788333..6865759)
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AA seq
1270 aa
AA seq
DB search
MQKSVRYNEGHALFLSVVARKEGTKRGYLSKKTTENSKWHEKFFALYQNVLFYFDSEQSA
RPSGIYLLEGCTCERVPAPKVSTGGKETLDKQHYFLIVFGHDGQKPLELRADEEAECDEW
VETIQQASYSDIIIEREVLMQKYIHLVQIVETEKVAANQLRTQLEDQDTEIERLKSEIVA
LNKTKERMRPYQVNQEEDDPDIKKIKKVQSFMRGWLCRRKWKIIVQDYICSPHAESMRKR
NQIVFNMVEAETEYVHQLSILVNCFLRPLRMAASSKKPPISHDDVSSIFLNSETIMFLHE
IFHQGLKARIANWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQVLANCKQNRDFDKLLK
QYESNAACEGRMLETFLTYPMFQIPRYIISLHELLAHTPHEHVERKSLEFAKSKLEELSR
VMHDEVSDTENIRKNLAIERMIVEGCDILLDTSQTFVRQGSLIQLPSVERGKLSKVRLGS
LSLKKEGDRQCFLFTKHFLICTRSSGGKLHLLKQGGVLSLIECTLIEEPDANDEDSKTSG
QVFGHLDFKIVVEPADTPAFTVVLLAPSRQEKAAWTSDISQCIDNIRCNGLMTSVFEENS
KVTVPHMIKSDARLHKDDVDICFSKTLNSCKVPQIRYASVERLLERLTDLRFLSIDFLNT
FLHTYRIFTSAAVVMDKLADIYKKPFTSIPVRIQYPSFDRLSITSFCPDYSLKMRKIAMD
QSKSLELFFATNQNNRSSSTGSEHPNEKSPRLRRKFSSPPPLSIPSRTSSPVRARKLSLN
SPLGFRVAALDLSIPISSSATNSPTSANPCISPPPSSNIKSPQDPSPEQSPGANDDGADT
PRIDALSGKLRRSIRRAVLESASMEKFIPESPQGSEAGDLSPCRSPSTPRHMRFRGPGVP
AVENSRCSVSPASAFAIATAAAGHSSPPVFNNSERMCDKEFIIRRAATNRVLNVLRHWVS
KHSQDFELNRELKMGVMILLEEVLRDPDLLPQERKATANILNALSQDDQDDAQLKIEDIL
QMAEFPKAECFESLSAMEIAEQITLLDHIIFRSIPYEEFLGQGWMKMDKNERTPYIMKTS
QHFNDMSNLVASQIMSHTDVGSRSSSIEKWVAVADICRCLNNYNGVLEITSALNRSAIYR
LKKTWAKISKQTRALMDKLQKTVSSEGRFKNLRETLKNCNPPCVPYLGMYLTDLAFIEEG
TPNFTEEGLVNFSKMRMISHIIREIRQFQQTPYRIEHQPKVTQYLLDKALIMDEDTLYDL
SLKIEPRLPA
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagagcgttcgctacaatgagggacacgcactgtttctgtccgtggtggcgcgc
aaagagggcaccaagcgcggctacctcagcaagaagacgacggaaaacagcaagtggcac
gagaagtttttcgccctctaccaaaacgtgctcttctacttcgactctgagcaaagtgct
cgaccctcgggcatttatctcctggagggctgcacatgtgaacgagtcccggcgcctaaa
gtgtccaccggaggcaaggagaccctggataaacagcactatttcctcattgtgtttggc
catgatggccagaagcctctggagctccgtgctgatgaggaagcagagtgtgatgaatgg
gtggagaccatccaacaagccagctattcagacattatcatcgagcgggaagtgctcatg
cagaaatacatccacctggtgcagattgtggagacggagaaggtggcagccaatcagctg
cgcacccagctggaggaccaggacaccgagattgagagactcaaatcagagattgtagcc
ttgaacaaaaccaaggagaggatgcggccttaccaagtgaaccaagaggaagacgatcca
gacatcaagaagattaaaaaggtccagagtttcatgcgaggctggctgtgtcggaggaag
tggaagatcattgttcaggactacatctgctctcctcatgccgagagcatgaggaagaga
aaccagattgtctttaacatggtggaggctgagaccgagtatgtccaccagctgtcgatc
ctggtgaactgcttcctcaggccactccgcatggctgctagctctaaaaaacctcccatt
agccatgatgacgtcagcagcatcttcctcaacagtgaaacaatcatgtttttgcacgag
atattccaccaaggcttgaaggcaaggatagcgaactggcccacactggttttagctgat
ctcttcgacattttgctgcctatgctgaacatctaccaggagtttgtacggaaccaccag
tacagcctgcaggttttagcgaactgtaaacagaacagggattttgacaagctgctgaaa
caatacgagtccaatgctgcgtgtgagggaaggatgctagaaaccttcctcacatatccc
atgtttcagatcccacgctatattatatctctacatgaactcttggctcatacgccgcac
gagcatgtagagcggaagagtctggagtttgccaagtcgaagcttgaagagctgtccagg
gtcatgcacgatgaggtgagtgacacggagaacatccgcaagaacctggctatcgagcgc
atgattgtagaaggttgtgacatcctcctcgacaccagtcagacgtttgtgagacaaggc
tctttgatccagctcccctcagtggagagggggaagctcagcaaggtacgactgggttct
ctctctctgaagaaagaaggagacaggcagtgcttcctgttcaccaagcatttcctcatc
tgtacccgtagctcaggaggcaagctgcacctgctcaaacaaggtggcgtactatccctg
atcgagtgcaccctcatcgaggaacccgacgccaatgatgaagactctaagacctcaggg
caggtgtttggccatctggactttaagatcgtggtggaacctgcagacactcctgcattt
acagtggtgcttctggctccatcacgccaggagaaggcagcctggaccagcgacatcagc
cagtgtattgataatatccgctgtaatggcctgatgaccagtgtgtttgaagagaactcc
aaagtcactgtgccgcacatgatcaaatctgatgcgcgtctccataaagacgatgttgac
atttgcttcagcaagacgctcaactcctgcaaggttccccagatccgctatgccagcgtt
gagcggctgctggagaggctgacagacctgcgcttcctatctatcgacttccttaacacc
ttcctgcacacgtatcgcatctttacctccgctgctgtggtcatggacaagctggcggac
atctataagaagcccttcacctccattccagtcaggatccagtatccttcattcgatcgc
ttgtctatcacatccttctgtccagattacagcttgaagatgaggaagatagccatggac
caatcaaagtccctggagcttttcttcgctaccaaccagaacaaccgctccagcagcacg
ggcagtgagcatccaaacgagaaatctcctcgcctgcgcaggaaattctcctcgcctcct
cctctctccatcccctcacgcacgtcctctcctgtgcgagcccgtaagctctccctcaac
tctccgctcggcttcagggtggctgcactggacctctccatcccgatctcctcctccgcc
accaacagccccacctcagctaacccctgcatctcgcctcctccctcctccaacatcaag
tctcctcaggatccttcacctgagcagagtcctggcgccaatgatgacggtgcagacaca
ccacgcatcgacgcgctctctggaaaactgcgccgtagcattcggagagctgtcctagaa
tcagcttcaatggagaagttcattcctgagtcaccacaaggcagtgaagctggagatctc
tcgccctgcaggtcgccgtctacaccacgacacatgcgcttcagaggtcctggagtccca
gcagtagagaactcgcgctgttcagtgtctccagcttcagccttcgctattgcaacagcc
gccgctggccacagcagccctccagttttcaacaactctgagagaatgtgtgacaaagag
ttcatcatccgaagagcagccactaaccgggttctgaatgtcctgcgccactgggtctcc
aaacactcccaggactttgagctgaatagagagttgaagatgggcgtgatgatcctcctg
gaagaggtgctgagagatcctgacctgctccctcaggagaggaaagccaccgcaaacata
ctgaatgctctttcacaagatgaccaggacgatgctcagctgaagatagaggacattctg
cagatggctgaattcccaaaggcagagtgctttgaatcactatcagcaatggagatagct
gagcagatcacacttctagaccacatcatttttcgaagcatcccttatgaggagtttctg
ggccaaggctggatgaagatggacaagaatgaaagaactccgtacatcatgaagaccagc
caacatttcaatgatatgagtaacctggtagcctcgcagattatgagccacacagatgta
ggctccaggtcgagctccatagagaaatgggtggccgtagccgatatatgccgctgtctg
aacaattacaacggcgtactggagatcacctctgccctgaaccgcagtgccatctacagg
ctgaaaaaaacctgggctaaaatcagtaaacagacgagagcgctcatggataagctccag
aagacggtgtcatcagagggacgatttaaaaacctgagggaaaccttgaaaaactgtaat
ccaccatgcgtcccttatctgggcatgtacttgacagacctggcgtttattgaggaagga
accccaaacttcactgaagagggtttggtcaacttctcaaagatgagaatgatatcccat
attatccgtgagatccgacaattccagcaaactccatacagaattgagcaccagccgaag
gtcacgcagtacctactggataaggccttgatcatggatgaagacacactgtatgacttg
tctctaaagatcgaacccaggcttcctgcttga
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