Ictalurus punctatus (channel catfish): 108255335
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Entry
108255335 CDS
T04658
Name
(RefSeq) zinc finger CCCH domain-containing protein 14
KO
K23038
zinc finger CCCH domain-containing protein 14
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108255335
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
108255335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_2
PWI
zf-CCCH_4
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
108255335
NCBI-ProteinID:
XP_047016177
Ensembl:
ENSIPUG00000015945
UniProt:
A0A2D0PNT6
LinkDB
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Position
2:complement(343593..349520)
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AA seq
657 aa
AA seq
DB search
MEIGTEISKKIRAAIKGKLQELGAYVDEELPDYIMVMVANKKNAQQMADDLSLFLGNNTI
KFTVWLHGVLEKLRSTAVEPASLRPKLLPSDPSTSSRDERKGEEPRALSVSSSRSDRLEG
RVSSSAHEHHGRRTSSDRSSSRLTSTVKPLLEHSAEAVIDIKPDLEDDDLITNDPRVVPS
VKPRPLVSRSSNRGSGRTEESYRSSEVMRGQERSSSIYGRSYREGHSKDEFSRKRKAPVA
SSVVRIQKGHGRLYESEEDEEDEEDYGMPSRVSLPPKPERKPSLPPAKQANKNLILKAIS
EAQDSISKTTAVYTIPQRQTVPVAPRTRSASDEMSRAAIRLVQEHLHELLPQEAHHTRPN
VPSRSLASRLQQDLPDDENREQQFELQLLETSRLKALDTRSFIMRKPELEQNPPIRNRLD
TVNQEEATPTTPRTVQAREKPECSPKFIVTLDGVPSPLASLTEHDMDTDHAPSSMTVDPS
ADHRTKPVQISMTSDLLFDDEGMMIEGEEQMEEGTAKVKRQKVLERCRFWPACKSGDECV
YHHPKTQCRTFPSCVYGEKCLFIHPNCKYDGKCSKPDCPYTHTSHRALLQPPKPAPPPQS
SSVCRFFPECKRTDCTFYHPKPCRFAAHCNRTGCPFYHPPASVPPRHALKWTKAQAS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgggacggagatcagcaagaaaattcgggcggccattaaagggaagctgcag
gagttgggggcgtatgtggatgaggaacttcctgactacatcatggtgatggtggccaat
aagaagaatgctcagcaaatggctgatgatctctcactgtttctgggcaacaacaccatc
aagttcaccgtgtggttacatggagtgctggagaagctcagatcaactgcagtggagccc
gcctctctccgccctaaactcctcccctctgatcccagcacgtccagtcgggacgagcgc
aaaggggaggagcctcgggctctctccgtgtccagctcacgctctgataggttagaagga
cgggtgtctagctccgcccatgagcaccatggcaggagaacgtcctctgaccgctcctcc
tccagactgacctccacagtgaagcctctgcttgaacactcggccgaagccgtcatcgac
atcaagcccgacctggaagacgatgacctcatcaccaacgatcccagggtcgtgccgtct
gtgaagccccgccccttagtcagccgttcgtccaatcgtggttctggaagaacagaggag
agttacaggtcgtccgaagtcatgagaggtcaggaaaggtcgagctctatttatgggcgg
agctacagagagggacacagtaaggacgaattctcccggaaaaggaaagctcccgtggcg
agctctgtggttcggattcagaaaggtcacgggcgcctttacgagagcgaggaggacgag
gaggacgaggaagattacggcatgccgagtcgagtttccctcccaccaaaaccagagcgc
aaaccatctctgcctccagcgaaacaggccaataaaaatttaatcctgaaggctatttct
gaggctcaggactccatcagcaaaaccacagctgtgtacaccatcccccagcgacagacg
gttcccgtggcaccacgaacacgctcagcgagcgacgagatgagcagagctgccatccga
ttggtccaagagcacctgcatgagctcctcccacaggaagcacatcacacccgcccaaac
gtcccttctcgctctctggcctctcgactgcagcaggatcttccagatgatgagaacaga
gagcagcagtttgagctgcagctgttggagacatcgagactgaaggctctggacactcgc
tccttcatcatgagaaaaccagagctggaacagaatccaccaatcaggaacaggctggac
accgtcaatcaggaggaggccacgcccaccactccacgcacagtgcaggccagagaaaaa
cccgagtgcagtccgaagttcatcgtgacgttagatggagtgccgagtcctctcgccagt
ctcactgaacacgacatggacactgaccacgcccccagctccatgaccgtggacccctca
gctgaccacaggacgaaaccagtgcaaatcagcatgacctctgacctcttgtttgatgat
gaaggaatgatgatagagggagaggaacagatggaggagggaacggcgaaggtgaagaga
cagaaggttctagagcgctgcaggttctggccggcatgtaagagcggagacgagtgtgtg
tatcaccatcctaaaacacagtgcaggacatttcccagctgtgtgtatggagagaagtgt
ctgttcatccatcctaactgtaaatacgacggcaagtgttccaaacccgactgtccgtac
acacacaccagccacagagccctgctgcagcctcccaaaccagctcctcctcctcagtcc
agcagtgtgtgtcgtttcttccccgagtgtaagaggacagactgtaccttctatcatcct
aaaccgtgtcgctttgcggcgcattgtaaccgtacaggatgtcccttctaccacccacca
gcctcggtcccacccagacacgccctcaagtggactaaagcacaggccagctga
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