Ictalurus punctatus (channel catfish): 108255352
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Entry
108255352 CDS
T04658
Name
(RefSeq) DNA repair protein RAD51 homolog 1 isoform X1
KO
K04482
DNA repair protein RAD51
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03440
Homologous recombination
ipu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108255352
03460 Fanconi anemia pathway
108255352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108255352
04121 Ubiquitin system [BR:
ipu04121
]
108255352
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108255352
Membrane trafficking [BR:
ipu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108255352
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
108255352
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
108255352
RecA family proteins
108255352
FA (Fanconi anemia) pathway
Other FA pathway factors
108255352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
RecA
HHH_5
ATPase
HHH
AAA_22
PAXNEB
AF1548-like_C
Motif
Other DBs
NCBI-GeneID:
108255352
NCBI-ProteinID:
XP_017306768
Ensembl:
ENSIPUG00000015843
UniProt:
A0A2D0PJI9
LinkDB
All DBs
Position
2:complement(353944..357358)
Genome browser
AA seq
372 aa
AA seq
DB search
MTSAGAACLRMRTSSVERESSSSARLVLEEVVKMAMSMSRVEVEANVEEDESFGPQPLTR
LEQCGISASDLKKLEDAGFHTIEAVAYAPKKELLNIKGISEAKADKILGEAAKLVPMGFT
TATEFHQRRAEIIQISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLP
IDQGGGEGKAMYIDTEGTFRPERLLAVAERYGLIGSDVLDNVAYARAFNTDHQTQLLYQA
SAMMAESRYALLIVDSATALYRTDYSGRGELSARQCHLGRFLRMLLRLADEFGVAVVITN
QVVAQVDGAAMFSADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMF
AINADGVGDAKD
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgcaggtgctgcgtgtctacgtatgcggacgtcttctgtcgagcgggaaagt
tcatcttcagctcgacttgttttggaggaggtggtgaagatggcgatgagcatgagtcga
gtggaggtcgaggccaatgtcgaagaggacgaaagcttcggcccacagcctctgacccgc
ctcgagcagtgtggtatcagtgcgagtgatctgaagaaactggaggatgcagggttccac
accatagaggccgtggcgtacgctcctaaaaaagagctgctgaacattaagggcatcagt
gaagccaaagctgacaagatcctgggtgaggcggctaaactggttccgatggggttcacc
acggcaacggagtttcaccagcgcagagccgagatcatccagatctccaccggctccaaa
gagctcgacaaactgctgcagggtggtatcgagacgggttccatcacggagatgttcggg
gagttccgtacaggaaagactcagctgtgccacacgctggcggtgacgtgtcagcttccc
atcgatcagggtgggggagaggggaaggccatgtacatcgacactgagggcaccttcaga
cctgagagactgctcgctgtggcagagaggtacggactcatcggcagtgatgttttagat
aatgtggcttacgcgcgagctttcaacacggatcatcagactcagctgctctatcaggct
tcagctatgatggccgagtctaggtatgctctgctgatagtggacagtgccactgcgctg
tacaggacggattattccggaagaggcgagctctcggcccgtcagtgtcatttgggacgc
ttcctccgcatgctgctgcgtctcgctgacgagtttggcgtcgctgtcgtcatcaccaat
caggtcgtagctcaggtggacggggcggccatgttttccgcagatcctaaaaagccaatc
ggagggaatatcatggcacatgcctccactaccaggttgtatttgaggaagggccgtggt
gaaactcggatctgtaaaatttacgactctccctgcttacctgaggcggaggccatgttc
gccatcaacgcagacggagtaggagacgctaaagactga
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integrated database retrieval system
