Ictalurus punctatus (channel catfish): 108255370
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Entry
108255370 CDS
T04658
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108255370
03037 Cilium and associated proteins [BR:
ipu03037
]
108255370
Transporters [BR:
ipu02000
]
Other transporters
Pores ion channels [TC:
1
]
108255370
Cilium and associated proteins [BR:
ipu03037
]
Other cilia and associated proteins
Stereociliary proteins
108255370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Phage_Gp23
Motif
Other DBs
NCBI-GeneID:
108255370
NCBI-ProteinID:
XP_017306790
UniProt:
A0A2D0PNY6
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All DBs
Position
22:3975538..3996598
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AA seq
924 aa
AA seq
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MHESIFLIFLERTHIHTSTKLPRTTMPREKLITFRSNVSIDLDDGDKSDSIYFVDIDEDR
RRQQGEMDKKKREGKNKADKGQRLQTKSDYLHNSEMTGIKRGGEVEEMPEQRNSSKNKGT
RKQQEVVEEEEWEKKKIKQENNQEDEQSKKMKRKNATDSISEASSSSDEEFEVDSLSEEG
LEKLMEAIDERKKLIATLRTQPWTMHKKMSMLRKWQAFIEKYEGILGKGKGRNLYAHKVK
MMKKWGKFQRHFNNFKKACVPWEMKIKEIESHFGSTVASYFVFLRWLFGINIILFALSFG
LVMFPEALMGKPYGSIPRKTVSRQEEPTAMNFDVLYDIGGYMKYTVMFYGYYDDQRTIGW
LRYRMPLCYFLVGVCSLAYSYMVVIRTMARNASKECGRDDTNFKYSWQIFTGWDYLIGNP
EAADNKFASITTNFKEVLVDEAELKKNENPRLMLFYRVMCNILVLVILTGSGYIIYYIVR
RSEFFFRDGMDKHSWWERNEVNVVMSLLSTFCPMMFEAITLLENYHPRVSLLFQMGRVFA
LYAGNLYSFLIAVVEQIKLAMVDEEVMKRNLTIWQANMYNSSIAENSTGSPITVDPADVP
RGPCWETMVGQEFVRMLVVDTLTFYTVLLINDFFRAVVIRFLNDYWCWDLEYTFPCYSLF
DLSGNLLTIIFNQGMVWMGTFYAPCLPILNLIRLQTSMYSQCWAVMSSNIPHTHICKASR
SSNFYMAILLFILFLCTVPLAFTVVTLRPSFDCGPFSGKNRVYDVILEALQMDFPAWTGN
VINYISNPGLVLSFLLLIALTLYYLHTTSKTHKQANNDLKKKLRTQHEENRRRASRLTKK
TAEHLDQDKNMAADEQQDKQSNNHSSLKDSRKSSSQSCYLPPPPDIFFGSRGSGLKHSRN
PPYTRPPAPRSHLLHGQLPGAPPY
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaaagcatctttcttatttttcttgaacggacccacatacacacaagtacaaag
ttaccgaggaccacaatgccaagagagaagctcatcacattcaggagtaacgtcagcatt
gatttggatgacggagacaaaagtgacagcatttactttgttgacattgatgaggatcga
agaaggcagcaaggagaaatggacaaaaagaagagagaaggaaagaataaagctgacaag
ggacagaggctgcagacaaaatcagattatcttcacaacagtgaaatgactgggataaag
agaggaggagaggtagaagagatgcccgagcaaagaaatagcagtaagaacaaggggacc
aggaaacagcaggaggtagtagaagaagaagaatgggagaagaagaaaattaagcaagaa
aacaatcaagaagatgaacaatcaaaaaagatgaaaaggaaaaatgcaacagacagcatt
tctgaggcgagctcttcatcagatgaagagtttgaggtggactcgttgagtgaggagggg
ctggagaaactcatggaagccatagatgagaggaagaagctcatcgctacactgagaaca
caaccttggacaatgcacaagaaaatgtctatgctcaggaagtggcaagcatttatagag
aaatacgagggcattttaggaaaaggcaaagggaggaatctgtatgcccacaaggtcaag
atgatgaagaaatgggggaaatttcagagacacttcaataactttaagaaggcctgcgtt
ccatgggagatgaagatcaaggaaattgaaagtcactttggctcaacagtagcttcctat
tttgtatttctgcgatggttgtttggaatcaacataattctctttgccctgtcctttggg
cttgttatgtttcctgaggcattaatggggaagccatatgggagtattcccaggaagaca
gtctccaggcaagaagaacccactgctatgaactttgatgtcttatatgacattgggggc
tacatgaagtatactgtcatgttttatggctactatgatgaccagagaacaattggctgg
ctcagataccgcatgcccctgtgctacttcctggttggggtgtgcagcttggcttacagt
tacatggtggtcatcagaaccatggcacgcaatgccagtaaagaatgtggaagagatgac
accaactttaaatacagctggcaaatattcaccggttgggattacctcattggaaacccg
gaggcagctgacaacaagtttgcctccatcaccacaaactttaaggaagtccttgttgat
gaggcagagttaaaaaaaaatgaaaaccctcgcttgatgctcttctaccgtgtcatgtgc
aacatcctggttctcgtcatacttacaggaagtggatatataatctattatatagtgcgc
aggtctgagttttttttccgggatgggatggacaagcacagctggtgggaaagaaatgag
gtgaacgtagtaatgtctctgttaagcacgttctgtccaatgatgtttgaagcgataacc
cttttggagaattaccatccacgcgtttccctgctcttccagatgggccgtgtctttgcc
ctttatgcaggcaacctttacagcttcctcatagctgtcgttgaacagatcaagttggcg
atggttgacgaagaggtaatgaagcgtaatctgaccatatggcaagctaacatgtataac
agttccatagcggagaattctactggttctcctatcacagtggatcctgcagatgtaccc
agagggccttgctgggagactatggtgggacaggagtttgtacgtatgctggttgtagac
acattgactttttacactgtgttgctgatcaacgacttcttccgagcagtcgtgattcgt
ttcctcaacgactactggtgctgggacctggagtacacctttccgtgctattccctgttc
gatttgagtgggaaccttctcaccatcatattcaaccaaggaatggtctggatggggaca
ttctacgccccctgtcttcccatactcaacctcatcagactgcaaacgtccatgtattca
caatgctgggctgtcatgagcagcaacatccctcacacgcacatctgcaaagcctcacgt
tctagcaacttctacatggccatactgctcttcatcctctttctctgcacagtgcccctc
gccttcaccgtcgtcactttgcgtccctcctttgactgcggacctttcagtgggaaaaac
cgcgtgtatgatgtgatcctggaggcattgcagatggattttcctgcctggaccggaaac
gtgatcaattacatctcaaacccgggactggtcctgtctttcctactgctcatagccctc
acactttattacctacatacgacatctaaaacacacaagcaggccaacaatgatctgaaa
aagaaactgcggactcaacatgaggagaatagaaggagggcaagccgtttaacaaagaag
acagccgaacatttggatcaagacaaaaacatggctgccgatgaacagcaggacaagcag
agcaacaaccattcgtctttgaaagacagcagaaagagcagcagccagagttgttatctt
cctcctcctccagatattttctttgggagtcgaggttctggcctcaaacactctcgcaac
cctccttacactcgaccccctgcaccccggtctcatctcttgcacggacaactgccagga
gctccaccttattaa
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