Ictalurus punctatus (channel catfish): 108255416
Help
Entry
108255416 CDS
T04658
Name
(RefSeq) DNA polymerase zeta catalytic subunit isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108255416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108255416
Enzymes [BR:
ipu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108255416
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
108255416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
108255416
NCBI-ProteinID:
XP_053542026
UniProt:
A0A9F7TQZ6
LinkDB
All DBs
Position
2:complement(170469..196856)
Genome browser
AA seq
3015 aa
AA seq
DB search
MFSVRIVCADYYLSRPLQQLDVCFSQFRDAEVHRVPVVRIFGATPAGQKTCLHVHGVFPY
IYVPYDGFGQEPERYLRQVAFSIDRAVSVSMGNPSSHTQHVFKITLVSGMPFYGFHPQEK
PFMKIYLYNPQMVKRVCELLQGGAVMNKCFQPHEAHIPFLLQFFIDFNLYGMNLLHLSAV
RFRRHTPGNTPDPGEQGQVPVADDSTLKSSRLSESALGGTFVRWDENNLPSSLVLENVAR
VSVCELEADAVAADILNRLEIENQIGRNPGLQAIWEDEKQRRRERNESSQIETPQSQGRP
CVEPVESERSFIKRLKEKLIENQFDVTQSDIVADDDDNDYDGDDDFPDLSLHPDDLSPSD
PPLISASQVEVHKDTPTDNKRSDGKTAEVAVVDEEAILSLLESSQTFLPMSQKSNKSLIL
DNSQDQAMVDFLEGLADHRFHKDVPITAPRQELSGSLSCPYNSDEEEAVPELEKEEAELS
MMMSQRWDSDIPEPSARRLVKEANESSSEDERELSEEEMDWSGNNLFADPSIPQLDGAAD
ENSDSSLSDKGSRTHSSLTANDKMLGRKNHLQSETTHLEPPSSAKILLECKHPEHRPSLS
LGKEEPADKNLPDKSQEASEPLTGLKVNKDVPYIPPVKHPIPSQIGADRVDGHPLYTNEN
KAVGVNQPDTENLSLGTSKLSQSRKKYSSIKNAEKNHISVLQNRSFSLCYSELRNYPPKA
ELENSVKDSRTSPVLRNHEQAPSPAKDLECLVPQEGKTEQNGEEGDVGELKIRYEDYQEN
KMERKIVAQQEAHYKFFPSVILSNCLPRPVKKQVGCKTIDGGCSLDHLEQKRSRMKLSKK
RNSPVSLKNASPTERSQTSKNEVATDLTSITPVQPSKEAVENAETETSELVQPDAVCTDS
ADGPVEEGLTDLPDKIACTEVSSLPGSKYTLRTKRKTMNYDSEDGDRSSPSSFLAHRDSL
KENCFLTCNRKKRKLSKKEPPVIIKYIIINRFKGQKNMLVKMARVKGDEPQVVLTPQKLE
HYDELAPLKDFWPKVPESTAVRYPVPEPKVKKHPKRKAKVTPQPGKLCNLPKTSFVKGSK
IRRTKKVKTFSLPKLPAPRPCYNDLTDDFGKEYSDVMMDLGYLSERAPSPSDSTPPRCWS
PTDTLLESESNACLINPHSDPCLGFTYEGLSRNKYSSRGRSSKPRKPSGASPRRKTKTTI
KQSEGESTTPGETQTKNSRRTSRKPKKVIDMMEVTDDSKSAAQKTRRSYKKNQVERLERS
SVVAGSQNSSQSLYPADDLPLTQTSSDDYRHPGSCQNILQVSSDSQALKCTTEPKTASVQ
LNTGDELVISVPASLQQGSPSSQSAADLSADKTTGFPCSVIKHSPSSRAVSEDGTSPCEF
KTEACSREQTSKDVHSLQPDPKKPAKPRRRQSKKKMENPTVQTPEITTSLNVLTHGPQKE
IQSVPKNGQTPAHPEMPSGIAVLKALLQKRQFKEGQCSPGENVLNSVSNTKQVLAKPRRA
SSATPRKPRVSRPPVPRVSKPGSRKRKNGKTEDHIRLEPPLSDGSPVFLSDPGFDSSYSI
EESLSPEVPHNYSFDINAVGQAGFSSLYSGSQFVLTDKNLPQKFLSDIKQEAVSSLHLEN
GQERVLDVVENCLCEPQRPVSPELFERSSCGDREGLSNEFSLSLLDPEKVLRNRNWGISL
AKMHGSHFQDFHCEKSDLLLGPDHFLSLTSVSFADNGVSPTADLLDGSEVFTSTTPSSSP
RSISSLSQIRSSSQAQKSAGVHILKPLMSPPSREEILSTLLELELSEATYQEPFCSDPSD
VPLRPREIAGRKLVLETRLAKDLTEFVGGLSQEGLHFWKTAFSAMTRPGSSPSRGTDSSN
LTKNEKDRSSPSPNSGQKVILLPCKSAPSRERVQLWLQAKRQFECLQRDRRRRVDVRNVM
LIQDENKSPCYEALESFLPFSQRQDEASEKVSVLQTLRKKVLSFPLSISPVQPGTSNNSP
KETKCTMEAEIRAQEDSDGNAFKPTPSPDPSSLPPWQQTSNMDPDNKKQELGFGLTSPKL
GGSVDPLSPESIKPKQFLSPSPFHIKDQDVESSSPSLLHSTPIHSKSRSKGVCQPECSHG
SEDMEPKSLRLQQRRNSNTSTLRRVLLTTQLKNQFAGLNVAKGENSEIEGPSLCNSYGFK
VGMQNLQEAKALHEVQHLTVMSLELHARTRRDLEPDPEFDPVCALFYCLSSDSPLPDSEK
KQITGAVVVDKDCHSSGQGSRSTAPLLVRSGVADLQVIYTVDEKEMFEEVCKIMRMYDPD
ILVGYEVQMHSWGYLLQRASALGVNLCQQLSRVPGDVKENRFTEDKDEYGTEVMTEIHIV
GRITINLWRIMKTEAALNNYTFETVAFHLLHQRFPLYTQRTLSDWFDHNTHLYRWKVVDH
YMSRVCGVMQLLQQRDVVGRTSEFARVFGIQFYHVLTRGSQYRVESMMLRIAKPLNFIAV
SPSVSQRAQQRAPQSVPLILEPESRFYSNSVLVLDFQSLYPSVIIAYNYCYSTCLGHAHS
LGTSDEFRFGCTSLRVPPDLLYQLRNDINISPNGVAFVKASVRKGLLPRMLEEILNTRLM
VKSVMKSYSGDEGLRRLLDARQLGLKLIANVTFGYTAAAFSGRMPSVELGDSIIHKARET
LERAIKLINDTKKWGARVVYGDTDSMFVLLKGATKEQAFKIGSEIAEAVTATNPKPIKLK
FEKVYLPCVLQTKKRYVGYMYESVDQKDPVFDAKGIETVRRDGCPAVAKIVERSVKLLFE
TRDISLVKQYVQRQCVKVLEGRASVQDLTFAKEYRGSASYRPGACVPALELTRRMMAHDR
RLEPRVGERVPYVIVYGSPGVPLIQLVRRPLEVLQDPALRLNSTYYITKQILPPIARIFS
LIGVDVLSWYHTLPRVQKWSSCPGGGAVGDESLRKGTISQYFTTLHCPVCDELTQLGVCE
RCRAEPQRVAVTLQHNLRGWEQQHDQLLKVCMSCSGSADRQAVCVSLDCPVLYKLSRVNR
QLHNAPYLRQLLQQL
NT seq
9048 nt
NT seq
+upstream
nt +downstream
nt
atgttctcagtgcgcattgtgtgtgcagattattacctgtccaggcctctgcagcagctg
gatgtgtgtttctctcagttcagagatgcagaggtgcacagagtgcctgtagtgcggata
ttcggggccacaccggcaggtcagaagacgtgtctgcacgtgcacggtgtgttcccgtac
atctacgtgccctatgatgggtttgggcaggagccggagcgttacctgcgacaggtggcc
ttcagcatcgaccgcgctgtcagcgtcagcatggggaacccatcctcacacacacagcac
gtcttcaagatcacactcgtctccggcatgccgttctatgggtttcaccctcaggagaag
ccgtttatgaagatttacctctacaaccctcagatggttaaaagagtgtgtgagctgctg
cagggtggagccgtgatgaataagtgtttccagcctcatgaagctcacatcccgttcctc
ctgcagttcttcatcgacttcaacctgtatggcatgaacctcctccacctgtccgcagtg
cgcttcagacgccacacaccaggtaacacaccagaccctggtgagcagggtcaggttcct
gtagcagatgacagtacactgaaaagctccagactgagtgagagtgcgctgggaggaacg
tttgttcggtgggatgagaataatttacccagctctctggtcttggagaacgtggcaagg
gtgagtgtgtgtgagctggaggccgacgctgtagcagcagacatcctgaaccggctggag
atcgagaatcagatcggaaggaatcccggactgcaggccatctgggaagatgagaagcag
agacggagggagaggaacgagagctcgcagatagaaacacctcagtctcagggtcgtccg
tgtgtggaaccagtggagagcgagcggtccttcattaagaggttaaaggagaagctaata
gagaaccagtttgatgtgacacagagtgacattgtagctgatgatgatgataatgattat
gatggcgatgatgattttcctgacctctcacttcaccctgatgatctgagtcctagtgat
ccgccattgatatctgcaagccaggtggaggtgcacaaagatacgcccacagacaataaa
cggtctgatggcaagactgcagaagtggctgttgtagatgaagaggccattttgagcttg
ttggagagcagtcagaccttcctgcccatgtcccagaagtccaacaagtccctcattctc
gataacagccaggatcaggcgatggtggactttctggagggtctcgcagatcatcggttt
cacaaagatgttccgataaccgctccccgtcaggagttatcaggaagcctaagctgcccc
tacaacagtgacgaggaagaagcggtgcctgagctcgagaaagaggaggcggagctaagc
atgatgatgtcacaaagatgggattcggacatcccggaaccatcggctcgacggttggtg
aaggaagcaaacgaaagctccagtgaagatgagcgtgagttgtcagaagaagagatggac
tggagcggaaacaacctttttgctgatccgtccattcctcaactggatggagctgcagac
gagaacagcgattcgtcgttatctgataaaggatcccgaactcactcatctcttactgct
aatgataagatgttgggcaggaaaaatcacttacaaagtgaaactactcacctagagccc
ccatcctcagctaaaatccttctcgagtgcaaacaccctgagcatagaccgtctctatca
cttggtaaggaggaacccgctgacaagaaccttcctgataaaagtcaagaggctagtgaa
ccattaacagggcttaaagtgaataaagacgtcccttatatcccaccagtcaaacaccca
attccgtctcagattggtgctgaccgagtggacgggcacccgctttacaccaacgagaac
aaagctgtaggcgttaaccaaccagatacagagaatttgagtctcggaacctcaaagctc
tcccagagccgcaaaaagtacagcagcatcaaaaatgctgagaagaatcatatctccgtc
ttgcagaatcgcagcttttccttgtgctattccgagctcaggaactatccccctaaagct
gagctggagaacagtgtgaaagactctagaacctctcctgtgctgaggaatcatgagcaa
gctccgagcccagcaaaagacctcgagtgtctggtacctcaagaaggtaaaacggagcag
aacggtgaagagggtgatgttggggagcttaagatcagatacgaagattaccaagaaaac
aaaatggaacggaaaattgtggcccagcaggaggcgcactacaaattctttcccagtgtt
attctctcaaactgcctccccaggcctgtgaagaagcaggtcgggtgtaagacgattgac
ggcggttgtagcttggatcatctggaacaaaaaaggtcaagaatgaagttaagcaagaag
aggaacagtccagtgagtctaaagaacgcaagcccgactgagaggtcccaaacttccaaa
aatgaggttgctacagatttgacctcgatcacaccagtccaaccaagcaaggaagctgtg
gagaatgctgagacggaaacctctgaactagtacaacctgatgctgtatgtaccgattca
gctgatggtcctgtcgaggaaggtctgactgatcttcccgacaaaattgcatgcaccgaa
gtgtctagtttacctggcagcaagtataccttacgcacgaaacgtaaaacgatgaattat
gacagtgaagatggtgatcgctcgagtccttcctctttcttggcacatcgagacagcctt
aaagagaactgttttcttacctgtaatcgaaaaaagaggaagttgtctaagaaagagcca
ccagtcatcatcaaatacattataatcaacaggtttaaaggccagaagaacatgttagta
aagatggccagggtcaagggagatgagccacaagtggtactaacaccacagaagcttgag
cattatgatgaacttgcccctctgaaagatttctggcccaaggttcctgaatcgacagct
gtcagataccctgttcctgaaccgaaggtaaagaagcatcccaaacggaaggccaaggtt
acaccacaacctgggaaactctgcaaccttccaaaaaccagttttgtaaaaggcagcaag
atcagaaggactaagaaggttaaaacgttctccttaccaaaattgcctgctcctaggcct
tgctataatgacctcaccgacgacttcggcaaggagtattctgacgtgatgatggatttg
ggttatctctctgagagagcacccagtccttctgattcaaccccacctcgatgctggtct
cctactgacactcttttggagtctgagtccaatgcttgtttgataaaccctcatagcgat
ccatgtcttgggtttacatatgaaggattgtcaaggaacaaatatagcagtaggggtagg
tcatctaaaccgaggaagccttccggtgctagcccaagacgaaaaactaaaaccactatt
aagcaatctgaaggtgaatctacaacacctggagaaacgcaaacaaaaaacagccgtaga
acttcaagaaaaccaaagaaagtcatcgatatgatggaagtaactgatgatagcaaatct
gctgctcagaaaacaaggaggtcttacaaaaagaaccaagtagagagattggaaaggtct
tctgtggttgcaggatctcaaaatagttcacagtctttgtatccagctgatgatcttcca
ctaacacaaacatcatctgatgattatcggcatccaggttcctgccaaaacattcttcag
gtcagtagtgattcccaagcactaaaatgtaccactgaaccaaagacagcgtcggtccag
ttgaacactggagatgaactggtcatcagtgtccctgcttcactacaacaaggttctccg
tcttctcagagtgctgctgatctttcggctgacaaaaccactggatttccatgctcggtc
atcaaacatagcccaagttcacgcgctgtaagtgaagatggaaccagtccgtgtgaattt
aaaaccgaagcctgtagcagagaacaaacctctaaagatgttcattctttacagccagac
ccaaagaagcctgccaagcccaggagacgtcaatccaaaaagaagatggaaaaccctact
gtacaaacccctgagattacgacatccttgaatgttttaacacatggacctcaaaaagaa
attcagtcagtgccaaagaacggacagacgccagctcatccagagatgccttcaggcatt
gcagtcttgaaggcactgctccagaagagacagttcaaggaggggcagtgctctccggga
gaaaacgtattaaacagtgtttctaacactaaacaagttcttgcaaaacccagaagggca
tcttcagcgacaccaagaaagcccagagtctcgagacctccagtgccacgagtgtctaag
ccaggaagtagaaaaagaaagaatggcaaaacagaagaccacattcgactggaacctccg
ctttcagatgggagtcctgtgtttttgtctgatcctggtttcgacagctcctattccata
gaagagagcttatctcctgaggttcctcacaattacagttttgacattaatgctgttggc
caggctggcttctctagtctgtattctggtagccagtttgttttaactgacaagaacttg
cctcagaagttcctcagcgatatcaaacaggaagcagtgtcttctctgcatttggaaaac
ggacaagaaagggtcctagacgttgtcgagaactgcctctgtgaaccacagaggccggtt
agccctgagctctttgagagatcctcatgtggagaccgtgaagggttatcaaatgagttc
tctctgtctcttctggaccctgagaaggttttgagaaacagaaattggggcatttcattg
gccaaaatgcatggcagccattttcaagactttcactgtgagaaaagtgacttgttatta
ggtcctgatcacttcttatcccttacatccgtctcctttgctgataacggcgtgtccccg
acagcggatttgctggacggtagtgaagtttttacatcaactactccaagcagttcacca
cgctctatcagctctctctcacaaattaggagcagcagtcaggctcagaagagtgcagga
gttcatatcctcaagcccctaatgtcccctccgagtcgggaggagattctctctaccctg
ctggagctggaactttcagaggccacctatcaagaacctttctgcagcgacccgtctgac
gtacctttgagaccaagagagatcgctggacgcaagctagttctggaaacaaggttagca
aaagatttgaccgagtttgttggtggtttatcacaagaaggtctgcacttctggaaaact
gcattctctgccatgacacgcccgggatcttcaccttcccgtggtaccgactcgtcaaac
ttgaccaaaaacgagaaggaccggagcagtccgtcccctaatagtggtcagaaggtcatt
ctactgccttgcaaaagcgctccaagccgggaacgtgtacaactctggctgcaagcgaag
agacaatttgagtgccttcaaagagatcggagaagacgagttgatgtgcggaacgtgatg
ttgatccaggatgagaataaatctccatgctatgaggcattagaaagctttttgcctttc
tctcagaggcaggatgaggcgtctgaaaaggtgtctgtgttgcagactctcaggaagaag
gtgttatcttttcctctcagtatatctccagtgcagccaggaacttctaataacagccca
aaggagacgaaatgtaccatggaggctgaaatcagagcgcaagaggactctgatgggaac
gctttcaaaccgactccgtctccagacccttcctctttgccaccatggcagcaaacatcc
aacatggatccggacaacaagaagcaggagttgggctttggattaacgtcccccaagcta
ggtggctccgtggatcctctctccccagaaagcatcaaaccaaagcagtttcttagtccg
tccccatttcatataaaggaccaggatgtggagagttcaagtccctccctcctccacagc
acccccatccacagcaagtcgagaagcaaaggagtctgccagcctgaatgcagtcatggt
tcagaagacatggagccaaagtctctgagacttcagcaaagacggaatagcaacacgagc
acgctacgtagagtactgctcactacacaacttaagaaccagttcgctggtctgaatgta
gctaaaggggagaactccgagatcgagggtccgtcgctgtgcaactcgtacgggtttaaa
gtcggcatgcagaacctacaggaagctaaagcgctgcatgaggtgcagcacctaacggtg
atgagtttggagctgcacgctcggacacgccgtgatttggagcccgacccagagtttgac
cccgtttgtgccttattttactgcctcagttccgatagtccgcttcctgactctgagaaa
aaacagataaccggcgcagttgtagttgataaggactgtcactcatcaggacaaggctcg
aggagcacagcgcccctgctggtcagatccggtgttgcggacctgcaggtcatttacact
gtggatgaaaaggagatgtttgaggaagtctgtaaaataatgagaatgtatgatcctgat
attttggttggttatgaggttcagatgcactcttggggttacctgttacagcgagcatca
gcactcggagtgaatctgtgccaacaactttcccgagtgccaggtgacgtaaaggagaac
cgcttcactgaagataaagacgagtacggcaccgaggtgatgacggagatccacatcgtc
ggacgcatcaccatcaacctgtggaggatcatgaagaccgaggcagcattgaataactac
acctttgagactgtggcgtttcacttgctgcatcagcgcttccctctttacacacagcgt
acactctctgactggttcgaccacaacacacacctgtacaggtggaaggtggtggatcac
tacatgagccgtgtgtgtggcgtgatgcagctcctgcagcagagggatgttgtgggtcgc
accagcgagtttgcgcgagtgttcgggattcagttctaccacgtcctcacacgaggctct
cagtaccgtgttgagtcgatgatgttgcgcattgctaagccgttgaactttatagcggtg
agcccgagtgtgtctcagcgagcccagcagagggcgcctcagagtgtccctctgatcctg
gagcctgagtctcgtttctatagcaactcggtgctggtgctggacttccagtctctctac
ccgtctgtcataatcgcctacaactactgctactccacctgcctcggccacgcccacagc
ctcggaacgtctgatgagtttaggtttggttgtacatctctgcgtgttcctcctgatctt
ctctatcagctccgtaatgacatcaacatctctccaaatggagtcgcctttgttaaggcg
tcggtgcgtaaaggtctgctcccccggatgttggaggagatcctaaacactcgtctgatg
gtgaagtcggtgatgaagtcgtacagcggtgatgaaggtttgcgtcgcctcctggacgct
cggcagctcggcctcaagctcatcgctaacgtcaccttcggctacacggccgccgccttc
tccggacgcatgcccagtgtggagcttggagacagcatcatacacaaagccagagagacg
ctggagagagccatcaaactcatcaacgacaccaagaagtggggggcacgcgtagtgtac
ggggacacagacagtatgtttgtgttgttgaagggggcgactaaagagcaggcgtttaag
atcggcagtgaaatcgctgaagcggtgacggccaccaaccccaaacccataaaactcaaa
tttgagaaggtgtacctgccgtgtgtgttacagactaagaagcgctacgtgggctacatg
tatgagtctgtggatcagaaggatccggtgtttgacgctaaaggcatcgagaccgtacgc
cgtgacggctgtcctgctgttgccaagatcgtggagcggtcggtgaagctgctgtttgag
acgagggatatctctctggtgaagcagtacgtacagaggcagtgtgtgaaggttctggaa
ggcagagcgagtgtgcaggacctgacttttgctaaagagtaccgcggcagcgcctcctac
aggccgggagcgtgcgtacctgcactcgagctcaccaggagaatgatggcgcacgaccgt
cgcttggagccacgggtgggcgagcgtgtgccgtacgtcatcgtgtacggttctcctgga
gttcctctgatccagctggtgcggcgccccctggaggttctgcaagatcctgcactgcgc
ctcaactccacctactacatcaccaaacagatcctccctcctatcgctcgcatattcagc
ctgatcggggtcgacgtgctcagctggtaccacaccctgccccgggtgcagaagtggtct
tcatgtccaggaggtggcgctgtaggagacgagtctctgaggaaggggacgatctcgcag
tacttcaccacgctgcactgcccggtgtgtgatgagctgactcagctgggagtgtgtgag
cgctgcagagccgaacctcagcgcgtcgctgtcacgctacagcacaacctccgagggtgg
gagcaacaacacgaccagctcctgaaggtgtgtatgagctgcagcggaagtgcagacagg
caggctgtctgtgtctctcttgactgtccggtgttgtataaactgtcccgggtgaacaga
cagctccacaacgccccctacctgcgacagctactgcaacaactctaa
DBGET
integrated database retrieval system
