Ictalurus punctatus (channel catfish): 108255431
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Entry
108255431 CDS
T04658
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108255431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108255431
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108255431
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
HECT type E3
108255431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
108255431
NCBI-ProteinID:
XP_053530355
Ensembl:
ENSIPUG00000002442
UniProt:
A0A9F7TEL9
LinkDB
All DBs
Position
22:complement(1233181..1255904)
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AA seq
1069 aa
AA seq
DB search
MFGATQTSKSQFLDKARLAREERKGQKERERAATQIQALVRRFLCRCRLQREIRNEVDEF
FAAGEAGAAKRNALSIFKISRKLLFVFSKDDKLRFEKLCRTVLSSMDAENEPKVWYVSLA
LSKDLTIPWLKQIKDLLWLSCEFLKKLKPDILQDNKLVTLYLTMLITFTDTSTWKIVRGK
GEALKPALNRICENIMGHLNQKGFYSVLQILLTNGLARSRPSLSKGTLTAIFTLSLRPVL
AAHFSDNLLRSFLLHIMSVPAVISHLNTLTPDCMITMQTHDLMRKFILFLSREEQCLDIC
VCLEGSHTLCLLGNLIQLGYLNVKVLEQEAGHFVRDLTDMMSYCQRYVSQKKSNLTHWHP
VLGWFSQTVDYGLNESMPLVTRQLQCLWGVPVICTLFCDVLSKKLEGQEPAPLPPPQPTA
AQNNLPVKNLFKRAFQKSASVRNILKPVGGKRVDSAEVQKVCGVCVLYQTALTTLTQIRL
QILTGLTYLDELLPKLWAFICELGPQGGLKLFLECLNNDTDESKQLLAMLMLFCDCSRHL
ITILDDIEVYEEQISFKMEELITISSFLNTFVYKMIWDGILENAKGEKLDLFHSVHGWLM
VLYERDCRRRFTPDEHWLRKDLKPSLLFQELDKGKKRTQLLLQYIPHVIPHKNRVLLFRN
IVTKEKETLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLG
VDEAGIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSSLHENHLQLFEFVG
KMLGKALYEGIVVDVPFASFFLSQVLGHHHSSFYSSIDELPSLDSEFYKNLTSIKRYDGD
VSDLGLTLSYDEDVMGQLVCHELIPGGKTISVSNENKISYIHLMAHFRMHTQIKEQTGAF
IRGFRSIINPEWLHMFSTPEVQRLISGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLWDI
LSSDFTPEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFF
TIRKKEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcgcgacgcagacgtccaagtctcagttcctggataaagcgcggctggcgcgg
gaggagaggaaggggcagaaggagcgcgagagagcggccacgcagatccaggctctggtg
cgcaggtttctctgccgctgtcggctgcagagggaaatcaggaacgaggtggatgagttc
ttcgccgcaggagaagcaggagccgctaagagaaacgcgctgtccatctttaaaatcagc
aggaagttattattcgtgttcagtaaggatgataaactgaggtttgagaaactctgcagg
acggttctgagcagcatggacgctgagaacgagccgaaggtgtggtacgtttctctggcg
ctgtctaaagacctgaccatcccctggctcaaacagatcaaagacctgctctggctctcc
tgcgagttcctcaaaaaactcaagccggacatcctgcaggataataaattagtgactctg
tatctgacgatgctcatcaccttcaccgacacgtccacatggaaaatagtgcgagggaaa
ggcgaggcgctgaagcctgcgttaaacaggatctgtgagaacatcatgggtcacctcaac
cagaagggcttctactccgttctgcagattttgttaaccaatggattggcgagatccaga
ccctctctctctaaaggcacactcaccgccatcttcacgctgtcactcagacccgtctta
gcagcacatttctctgataacctgctgagatctttcctcctccacatcatgtccgtccct
gccgtcatctcccatctcaacacgctcactccagactgtatgatcactatgcagactcat
gatctgatgaggaagtttatcttgttcctgagtcgagaggagcagtgtttagacatctgt
gtctgtctggagggaagtcatacactctgcttactgggtaacctgatacagctgggttac
ctgaacgtgaaggtgttggagcaggaggccggtcactttgtgagagatctgacagacatg
atgtcctactgccagagatacgtctctcagaaaaagtccaacctcacacactggcacccg
gtgctgggctggttctcccagactgtcgactacgggctgaacgagtcgatgccgctggtg
acgaggcagctgcagtgtctttggggcgttcctgtgatctgcacgctcttctgtgacgtc
ctcagcaaaaaactggaggggcaagagcccgcccctcttcctcctcctcagccaaccgca
gctcagaacaacctgcctgtcaaaaatctgtttaagcgagcgttccagaagtcggcgtcg
gtccggaacattctgaagccggtcggggggaagagggtggactcggccgaggtgcagaaa
gtgtgcggcgtgtgtgtgctgtatcagacggccctcaccacgctcacacagatccgcctg
cagatcctcacaggtctgacgtatctggacgagctgctgccgaagctgtgggcgtttatc
tgtgagctcggacctcagggaggactcaaactcttcctcgagtgtctcaacaacgacacg
gacgagtccaaacagctgctggccatgctcatgctcttctgtgactgctcacgacaccta
ataacgatcctggatgatatcgaggtttacgaggagcagatttcctttaagatggaggag
ctcatcaccatctcgtccttcctaaacacgtttgtgtataaaatgatctgggatggcatt
ctggagaatgcgaaaggggagaagctggatctgttccacagcgtgcacggctggctgatg
gtgctgtatgagagagactgtcgcaggagattcacgcctgatgaacactggctacgcaag
gacctgaagcctagtctgctgttccaagagctggacaaaggcaagaagagaactcagctt
ctgctgcagtacatccctcacgtcattccacacaaaaacagggttctgttgttccggaac
attgtgacgaaggaaaaggagacgctgggattggtcgagacaagctccgcctccccgcat
gtgacgcacataactattcggcgctctcgcatgctcgaggacgggtacgaccagttgcgt
aggctgcccgtgaactccattaaaggtgtgatccgtgtgaagtttgtgaatgacctaggg
gtggacgaggctgggatcgatcaggacggagtgtttaaggagtttctggaggagatcatt
aagaaggtcttcaaccctgcgctcaacctgttcaagacgaccagtgggaacgagcgcctg
tacccctcgcccacgtccagcctccatgagaaccacctgcagctgttcgagttcgtgggt
aagatgctgggtaaggcgctgtacgagggcatcgtggtggacgtccccttcgcctcgttc
ttcctgagtcaggtgctcggacatcaccacagctccttctacagctccatcgacgagctg
ccctcactcgactccgagttctacaagaacctcacctccattaagcgctacgatggtgat
gtgagtgatctgggtctgactttatcatacgatgaggatgtgatggggcagttagtgtgt
catgagttgattccgggtggaaagaccatttctgttagtaatgaaaacaagatcagctac
atccacctgatggcacatttccgaatgcacacccagataaaggagcagacgggggcgttt
atccgcggtttccgcagcatcatcaaccccgagtggctgcacatgttctccacccctgag
gtgcagcggctcatctccggggacaacgccgagatcgatctggacgacctcaaaaagcac
actgtgtactacggcggcttccacagcagccacagggtgataatctggctgtgggacatc
ctgtccagtgacttcactcctgaagagagggccatgttcctcaagtttgtcaccagctgt
tccagacctcctctgttgggtttcgcctatctcaaaccgcctttctccatccgctgtgtg
gaagtgtcggacgaccaggacacgggggacactctgggcagcgtgctccgtggtttcttc
accatacgcaagaaggaaccaggcggccgtctgcccacctcctccacctgcttcaacctg
ctcaaactgcccaattacagcaagaagagcatcctcagagacaaactgcgctacgccatc
agcatgaacacgggcttcgagctctcctaa
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