Ictalurus punctatus (channel catfish): 108255487
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Entry
108255487 CDS
T04658
Name
(RefSeq) nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108255487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108255487
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108255487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap_D2
Nrap_D3
Nrap
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
108255487
NCBI-ProteinID:
XP_017306925
Ensembl:
ENSIPUG00000018266
UniProt:
A0A2D0PPB6
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All DBs
Position
22:complement(7171034..7183799)
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AA seq
1145 aa
AA seq
DB search
MKRKNTAKDEDLENKMETLHPSEDEEESAKKPKGSKKTASTPLGEDGVLRPLKLSKGELY
KAPTVEELNQLKEAESLFHCSLLKMQMEELLKEVALSERRKKQMDSFIQQITDLLKSVPE
TPVVELSDLSWLSESGIDVPFVLVSEESKGKFHMEPPDSVDMIGSYPLGTCIKPRVSVDL
AVTIPASILHPMDSINQRYSRKRALYLAGLAQHLSTSPLVGPLHYSCLHGNRLRPLLLVT
PSGKDSNSIVLRIHAIPPPDFLKPSRFHPQKNNIRTAWYTGQDAAQGSSEPPTPQYNSTV
VGDHLPRSHLQFLSVHCDQCPAFRDGVALLKVWLRQRELDQGAGCFGGFLASMLLSYLLS
THKVGKSMNAYQLLRNALHFIASTDLTENGITLAKNPDSKAPSLPEFQTAFQVVFVDPSG
HLNMCADMTACTYKRIQHEASLSLQFWDDPTLDGFQALLMTPKPMLRTYDNVYQLNDLVK
MQAACKKLSLLSSLMDHSGNYVLAVLPFILSLLQRGLSDRIHLLAYSLPQDPEWSVYGEP
PMHKDQPPVSIGLLLNPERALSVLERGPAADSPEAAEFRQLWGSRSELRRFQDGAITEAV
LWSGSSTCQRRHVLLKIITHLLELHADIPKSCVRYVGGQMDDVIKVKEGRTGEEESLKVV
QCFDDLSRKLWKLEGLPLSITSVQGAHPALRYTQVFPPVPVKLAYSYFDREKTCRALVPQ
KDKPCPYYITPIKVICHMEGSGKWPSDRLAIRHIKAAFHIRLGELLKQEHGYTCRPLPTH
LDVWKDGLVFRIQVAYHREPQVLRESVTAEGMLIQRDNAEAQALELETQHKPFLTSTLHG
LQQQQPCFSAVCRLAKRWLAAQFFSGDIIEEAADLLVASLFLQPAPFTPPSSPQVGLLRF
LHLLSTFDWKNNPLVVNLNDKLIASDYTEIKNHFLASRESLPVMFIATPNDKNVSIWTKE
GPSVQMLQRVVLVAAESLRVLEAQLINPNQKQDIRVVFRPPLEAYDVLIDLRPKQVPMLS
RAVDPPNTTCHPGTLDGDAVSSGGAFPVVDFDPVKLYLSELRDAYGDLALFFNDPYGGTV
IAVLWKPKAFQPQPFKTSLMKARRVDVTEDVAITVPNIEAIVQDFRIIGEGLVHKVELRT
ERWVV
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaaaaatactgcaaaagatgaagatctggaaaataagatggaaacattgcac
ccatcagaggacgaagaggaaagtgcaaagaaacccaaaggatccaaaaagacagcaagt
acaccacttggggaggatggtgtccttcgcccactgaaactctctaaaggagagttgtac
aaagcccctactgtggaggagctcaaccagctgaaggaggcagagagtctgtttcactgc
agtctgctcaaaatgcagatggaggaactgctcaaggaggtggcactgagtgagcgcagg
aagaaacagatggattccttcatacagcaaatcactgatcttctgaaatctgttcctgaa
actccagtagtggaattgtcagacttgtcttggttatcagagtcgggaattgatgtccca
ttcgtcctggtttctgaggagtctaagggcaagttccacatggagccacctgactctgtg
gacatgattgggagttatcctctgggaacttgcatcaagccaagagtttctgttgatctg
gcggtcacgattcctgctagcatcctgcacccgatggatagcataaaccagaggtactct
cgaaagcgagctctgtacctggcaggactggcacagcacctttccacctctccgttagtg
ggcccactgcattattcatgcctccatggcaaccggctccgcccactcctgcttgtcaca
ccttcaggtaaggacagcaacagcatagtgttgagaattcacgccatcccacctccggac
ttcctcaaaccaagccgcttccatccgcagaagaacaacatccggacagcctggtatact
ggccaagatgctgcgcaaggaagcagtgagcctcctactcctcagtataacagtacggta
gtgggggatcacctccctcgctcacacctgcagttcctcagtgtgcactgtgatcagtgc
cctgcctttcgagatggtgtggctctgctcaaagtgtggctcagacagagggagctagat
cagggtgctgggtgttttggaggattcttggcctccatgctgctgtcttatcttctgtcc
acacataaagtgggtaaatccatgaacgcctaccagctgctcagaaatgcactgcatttc
atagcttccacagacttgactgagaatggtattaccttggcaaaaaacccagattcaaaa
gcaccttctctgcctgagttccaaactgctttccaagtggtgtttgtggatccctctggc
caccttaacatgtgcgcagacatgacggcttgcacctataaacggatccaacatgaggca
tctctgtccctccagttctgggatgatcccaccctagatggtttccaggctctacttatg
acccccaaacccatgctcaggacatatgacaatgtctatcaactgaatgatttggtgaaa
atgcaagccgcctgtaaaaagctgagtctcctcagcagtctcatggaccacagcgggaac
tacgttcttgctgtgctccccttcatcttgtctcttctgcagcgaggactctcggacagg
atccaccttctggcttactctcttcctcaagaccctgagtggtcagtgtatggtgaaccc
cctatgcacaaagaccagccgcctgtgtccatcggactgctgttgaaccctgagcgtgcg
ctctcggttctggagagaggacctgcagcagatagccctgaggcagccgagttccggcag
ctgtggggttctcgttcagagctgaggcgctttcaggatggagccatcactgaggcagtg
ctgtggtctgggtcctccacctgccagaggaggcatgtcctgctgaagatcatcacccac
ttattggaacttcatgcagatataccaaagtcatgtgttcggtatgtgggaggacaaatg
gatgacgtcattaaagttaaggagggcagaacgggagaagaggagagtctgaaagtggtt
cagtgcttcgatgatctaagcaggaagctgtggaagctggagggtctgcctctatccatc
acatcagtgcagggtgctcacccagctctcagatacacacaggtgtttcctcctgtccca
gtaaagctggcctactcgtattttgatagggagaagacttgccgtgctttggttccacag
aaggacaagccttgcccttattatataactccgataaaagtgatctgtcacatggaaggg
agtggaaagtggcctagtgaccgcttagcaatccgtcatattaaagcagccttccacatc
cggctcggagagctgctgaaacaggagcacggctacacgtgccggcccttacctacacac
ctggacgtgtggaaggacggactggtgttccgcatccaagtagcgtaccaccgagagccg
caggtgctgagggaaagcgtgaccgccgagggcatgctgattcagcgagataatgcagaa
gcacaggcactggagctcgagacccagcacaaacccttcctcaccagcaccctgcatgga
ctgcagcagcagcagccatgtttcagcgcagtttgccgtctggccaaacgctggctggct
gcacagttcttcagtggggatataatagaggaggcagctgatctgctggtagcctcgctc
ttcctacagccggctcccttcacccctccgagttctcctcaggttggtctccttcgcttc
cttcatctgctctccactttcgactggaagaacaaccctctggtggtcaacctcaacgac
aaactcatagcttcggactacaccgaaatcaaaaatcacttcctggcatcgagggaatct
ttgcccgtgatgtttatcgccactcccaatgataagaatgtctccatttggaccaaagag
ggaccttctgttcagatgctccagcgtgtcgtgttggttgcagcagaaagcctgcgggta
ctggaggcccagctcatcaaccccaaccaaaaacaagacatccgggtggtgtttcgaccc
ccgctggaggcctatgatgttctgatcgacctcagacctaaacaggtccccatgctgtcc
agagctgtggaccctcctaataccacctgtcacccaggcaccctggatggggacgcagtg
agctcaggaggggctttccctgtcgtggattttgatcctgtgaaactgtatctgtctgag
ctcagggatgcatatggggatctggcgctatttttcaacgacccttatggaggaaccgtg
attgcagtgctgtggaaacccaaagctttccagcctcagccgttcaagacttctctgatg
aaagccagacgagtggacgtgactgaagatgtggcaattactgtccctaacatagaggcc
attgtgcaagatttccgtatcattggggagggcctggtccacaaggtcgaattaaggact
gagagatgggttgtctga
DBGET
integrated database retrieval system