KEGG   Ictalurus punctatus (channel catfish): 108255487
Entry
108255487         CDS       T04658                                 
Name
(RefSeq) nucleolar protein 6
  KO
K14544  U3 small nucleolar RNA-associated protein 22
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    108255487
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ipu03009]
    108255487
Ribosome biogenesis [BR:ipu03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    108255487
SSDB
Motif
Pfam: Nrap_D4 Nrap_D5 Nrap_D2 Nrap_D3 Nrap Nrap_D6
Other DBs
NCBI-GeneID: 108255487
NCBI-ProteinID: XP_017306925
Ensembl: ENSIPUG00000018266
UniProt: A0A2D0PPB6
LinkDB
Position
22:complement(7171034..7183799)
AA seq 1145 aa
MKRKNTAKDEDLENKMETLHPSEDEEESAKKPKGSKKTASTPLGEDGVLRPLKLSKGELY
KAPTVEELNQLKEAESLFHCSLLKMQMEELLKEVALSERRKKQMDSFIQQITDLLKSVPE
TPVVELSDLSWLSESGIDVPFVLVSEESKGKFHMEPPDSVDMIGSYPLGTCIKPRVSVDL
AVTIPASILHPMDSINQRYSRKRALYLAGLAQHLSTSPLVGPLHYSCLHGNRLRPLLLVT
PSGKDSNSIVLRIHAIPPPDFLKPSRFHPQKNNIRTAWYTGQDAAQGSSEPPTPQYNSTV
VGDHLPRSHLQFLSVHCDQCPAFRDGVALLKVWLRQRELDQGAGCFGGFLASMLLSYLLS
THKVGKSMNAYQLLRNALHFIASTDLTENGITLAKNPDSKAPSLPEFQTAFQVVFVDPSG
HLNMCADMTACTYKRIQHEASLSLQFWDDPTLDGFQALLMTPKPMLRTYDNVYQLNDLVK
MQAACKKLSLLSSLMDHSGNYVLAVLPFILSLLQRGLSDRIHLLAYSLPQDPEWSVYGEP
PMHKDQPPVSIGLLLNPERALSVLERGPAADSPEAAEFRQLWGSRSELRRFQDGAITEAV
LWSGSSTCQRRHVLLKIITHLLELHADIPKSCVRYVGGQMDDVIKVKEGRTGEEESLKVV
QCFDDLSRKLWKLEGLPLSITSVQGAHPALRYTQVFPPVPVKLAYSYFDREKTCRALVPQ
KDKPCPYYITPIKVICHMEGSGKWPSDRLAIRHIKAAFHIRLGELLKQEHGYTCRPLPTH
LDVWKDGLVFRIQVAYHREPQVLRESVTAEGMLIQRDNAEAQALELETQHKPFLTSTLHG
LQQQQPCFSAVCRLAKRWLAAQFFSGDIIEEAADLLVASLFLQPAPFTPPSSPQVGLLRF
LHLLSTFDWKNNPLVVNLNDKLIASDYTEIKNHFLASRESLPVMFIATPNDKNVSIWTKE
GPSVQMLQRVVLVAAESLRVLEAQLINPNQKQDIRVVFRPPLEAYDVLIDLRPKQVPMLS
RAVDPPNTTCHPGTLDGDAVSSGGAFPVVDFDPVKLYLSELRDAYGDLALFFNDPYGGTV
IAVLWKPKAFQPQPFKTSLMKARRVDVTEDVAITVPNIEAIVQDFRIIGEGLVHKVELRT
ERWVV
NT seq 3438 nt   +upstreamnt  +downstreamnt
atgaagagaaaaaatactgcaaaagatgaagatctggaaaataagatggaaacattgcac
ccatcagaggacgaagaggaaagtgcaaagaaacccaaaggatccaaaaagacagcaagt
acaccacttggggaggatggtgtccttcgcccactgaaactctctaaaggagagttgtac
aaagcccctactgtggaggagctcaaccagctgaaggaggcagagagtctgtttcactgc
agtctgctcaaaatgcagatggaggaactgctcaaggaggtggcactgagtgagcgcagg
aagaaacagatggattccttcatacagcaaatcactgatcttctgaaatctgttcctgaa
actccagtagtggaattgtcagacttgtcttggttatcagagtcgggaattgatgtccca
ttcgtcctggtttctgaggagtctaagggcaagttccacatggagccacctgactctgtg
gacatgattgggagttatcctctgggaacttgcatcaagccaagagtttctgttgatctg
gcggtcacgattcctgctagcatcctgcacccgatggatagcataaaccagaggtactct
cgaaagcgagctctgtacctggcaggactggcacagcacctttccacctctccgttagtg
ggcccactgcattattcatgcctccatggcaaccggctccgcccactcctgcttgtcaca
ccttcaggtaaggacagcaacagcatagtgttgagaattcacgccatcccacctccggac
ttcctcaaaccaagccgcttccatccgcagaagaacaacatccggacagcctggtatact
ggccaagatgctgcgcaaggaagcagtgagcctcctactcctcagtataacagtacggta
gtgggggatcacctccctcgctcacacctgcagttcctcagtgtgcactgtgatcagtgc
cctgcctttcgagatggtgtggctctgctcaaagtgtggctcagacagagggagctagat
cagggtgctgggtgttttggaggattcttggcctccatgctgctgtcttatcttctgtcc
acacataaagtgggtaaatccatgaacgcctaccagctgctcagaaatgcactgcatttc
atagcttccacagacttgactgagaatggtattaccttggcaaaaaacccagattcaaaa
gcaccttctctgcctgagttccaaactgctttccaagtggtgtttgtggatccctctggc
caccttaacatgtgcgcagacatgacggcttgcacctataaacggatccaacatgaggca
tctctgtccctccagttctgggatgatcccaccctagatggtttccaggctctacttatg
acccccaaacccatgctcaggacatatgacaatgtctatcaactgaatgatttggtgaaa
atgcaagccgcctgtaaaaagctgagtctcctcagcagtctcatggaccacagcgggaac
tacgttcttgctgtgctccccttcatcttgtctcttctgcagcgaggactctcggacagg
atccaccttctggcttactctcttcctcaagaccctgagtggtcagtgtatggtgaaccc
cctatgcacaaagaccagccgcctgtgtccatcggactgctgttgaaccctgagcgtgcg
ctctcggttctggagagaggacctgcagcagatagccctgaggcagccgagttccggcag
ctgtggggttctcgttcagagctgaggcgctttcaggatggagccatcactgaggcagtg
ctgtggtctgggtcctccacctgccagaggaggcatgtcctgctgaagatcatcacccac
ttattggaacttcatgcagatataccaaagtcatgtgttcggtatgtgggaggacaaatg
gatgacgtcattaaagttaaggagggcagaacgggagaagaggagagtctgaaagtggtt
cagtgcttcgatgatctaagcaggaagctgtggaagctggagggtctgcctctatccatc
acatcagtgcagggtgctcacccagctctcagatacacacaggtgtttcctcctgtccca
gtaaagctggcctactcgtattttgatagggagaagacttgccgtgctttggttccacag
aaggacaagccttgcccttattatataactccgataaaagtgatctgtcacatggaaggg
agtggaaagtggcctagtgaccgcttagcaatccgtcatattaaagcagccttccacatc
cggctcggagagctgctgaaacaggagcacggctacacgtgccggcccttacctacacac
ctggacgtgtggaaggacggactggtgttccgcatccaagtagcgtaccaccgagagccg
caggtgctgagggaaagcgtgaccgccgagggcatgctgattcagcgagataatgcagaa
gcacaggcactggagctcgagacccagcacaaacccttcctcaccagcaccctgcatgga
ctgcagcagcagcagccatgtttcagcgcagtttgccgtctggccaaacgctggctggct
gcacagttcttcagtggggatataatagaggaggcagctgatctgctggtagcctcgctc
ttcctacagccggctcccttcacccctccgagttctcctcaggttggtctccttcgcttc
cttcatctgctctccactttcgactggaagaacaaccctctggtggtcaacctcaacgac
aaactcatagcttcggactacaccgaaatcaaaaatcacttcctggcatcgagggaatct
ttgcccgtgatgtttatcgccactcccaatgataagaatgtctccatttggaccaaagag
ggaccttctgttcagatgctccagcgtgtcgtgttggttgcagcagaaagcctgcgggta
ctggaggcccagctcatcaaccccaaccaaaaacaagacatccgggtggtgtttcgaccc
ccgctggaggcctatgatgttctgatcgacctcagacctaaacaggtccccatgctgtcc
agagctgtggaccctcctaataccacctgtcacccaggcaccctggatggggacgcagtg
agctcaggaggggctttccctgtcgtggattttgatcctgtgaaactgtatctgtctgag
ctcagggatgcatatggggatctggcgctatttttcaacgacccttatggaggaaccgtg
attgcagtgctgtggaaacccaaagctttccagcctcagccgttcaagacttctctgatg
aaagccagacgagtggacgtgactgaagatgtggcaattactgtccctaacatagaggcc
attgtgcaagatttccgtatcattggggagggcctggtccacaaggtcgaattaaggact
gagagatgggttgtctga

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