Ictalurus punctatus (channel catfish): 108255505
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Entry
108255505 CDS
T04658
Name
(RefSeq) transcription termination factor 1 isoform X1
KO
K15225
transcription termination factor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108255505
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
108255505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
DUF7662
Motif
Other DBs
NCBI-GeneID:
108255505
NCBI-ProteinID:
XP_017306981
Ensembl:
ENSIPUG00000007333
UniProt:
A0A2D0PNI3
LinkDB
All DBs
Position
22:complement(14620565..14627551)
Genome browser
AA seq
682 aa
AA seq
DB search
MWACPATLKVEKDAINEDVEHSVSTEEPPRKKKKREKTKEVNEAKELETQSNEKREEPLA
MKKEKNLKESQVNIAEERNEAPQVNLVVESETQSNKELEKKRKRKKTLKESEENIAEESK
ETEEVNLAMEAETRSNKELEKKRKRKKTLKESEENIAEESKETEEVNLAVESETRSNKEL
EKKRKRKKTLKESEENIAEESKETEEVNLVVESETRSNKELERKRKRKKTLKESEENIAE
ESKETEEVNLAVESETRSNKELKKKKGKSKDKNRDSLEKKSLPNIKKKRTQGEKKEGPGI
RKTALTVIDEKLLQQMKEFIPDIESREVMNMSKMIKYDMPRFKEFKQQGISLNIGRFTVK
ENERLRKNVKDFMALTAIDNPTKLFFTHRFKTEQENIKKLKVRHKFFERIAEGIPRSCYY
IYARGRRMFDEKNYQGEFTAEELHALNKLHTLHGSNWKKISELTGRSAMSLQKRYTQIAD
NEGPWSKKEVQRLLRAVRDHVVSKIPGGADNYDSVRVTKEVLYKRLPLMKISKKVKTRSW
TQCREKWMGILAMRMSFGTLLRQKKSLNVQIKLIKGIYEMDIDDVAHVNWEDLTALIGDL
PPTYIQRKWHKMKVCCVPNWQKKSFGDIVDFMYKTILPQLEQTLASCKGSDETQHNENQE
SYLLSDIFQDIGDDDDSSEVNT
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcgtgtccagcaactttgaaagttgagaaagacgctatcaatgaggatgtagag
cactctgtaagtacagaagaaccccctagaaaaaagaaaaagagggagaagacaaaggaa
gtgaacgaagccaaggagttggagacacaaagcaatgaaaagagagaagaaccactagct
atgaagaaggaaaagaatctgaaagagtcacaggtgaatattgcagaagagagaaatgag
gcaccgcaagtaaatttagtagtggagtcagagacacaaagcaacaaagaactggaaaag
aaaaggaaaaggaaaaagactctgaaagagtccgaggagaatattgcagaagagagtaag
gagacggaggaagtaaatttagcaatggaggcagagacacgaagcaacaaagaactggaa
aagaaaaggaaaaggaaaaagactctgaaagagtccgaggagaatattgcagaagagagt
aaagagaccgaggaagtaaatttagcagtggagtcagagacacgaagcaacaaagaactg
gaaaagaaaaggaaaaggaaaaagactctgaaagagtccgaggagaatattgcagaagag
agtaaggagacggaggaagtaaatttagtagtggagtcagagacacgaagcaacaaagaa
ctggaaaggaaaaggaaaaggaaaaagactctgaaagagtccgaggagaatattgcagaa
gagagtaaagagacggaggaagtaaatttagcagtggagtcagagacacgaagcaacaaa
gaactgaaaaagaagaaaggtaaatcaaaagacaagaatcgtgacagtttggaaaaaaaa
tctcttccaaacatcaagaaaaagagaacacagggggaaaaaaaagagggcccaggaatc
cgaaaaacagcgttgactgtgattgatgaaaaacttttgcagcagatgaaagaatttatt
cctgatatcgagtcaagggaggtgatgaacatgagtaaaatgatcaaatacgacatgcct
agatttaaggaattcaaacaacaaggcatctctttgaatatcggacgtttcactgtaaaa
gaaaacgagaggctgaggaagaacgtcaaagacttcatggctctcaccgcaatagataac
cccaccaagctgttcttcacacatcgctttaagacggaacaggagaatataaagaagctc
aaagtgagacacaagttctttgaaaggatagcggaaggaattcccagatcctgctattat
atttatgctcgtggaagaagaatgtttgatgagaaaaactaccagggagagtttacagcg
gaagaacttcacgcgttgaacaagttgcacactttacatggtagtaattggaagaagatt
tcagagttgactggtcgaagtgcaatgtcactccagaaacgttacacacagattgctgat
aacgaaggcccctggtccaaaaaggaggtacagagacttttgagagctgtacgagatcac
gtagtgagcaaaatcccaggtggagccgacaattacgattctgtaagagtgacgaaggaa
gtgttgtataaaaggctccccttgatgaagatctctaagaaggtgaaaactcgttcgtgg
actcagtgcagggagaaatggatgggtattttggcaatgagaatgtcctttggaaccttg
ctccgtcagaagaaatctctcaatgtccagatcaaactcattaaagggatatatgaaatg
gatatcgatgatgttgcccatgtcaactgggaggacctaacagcactgattggggatcta
cctccaacgtacatccaaaggaagtggcacaaaatgaaagtgtgctgtgtgcctaactgg
caaaaaaagagttttggagatattgttgactttatgtacaagaccatcttaccacagctg
gagcagacgctggcatcctgcaagggctctgatgagactcagcataatgaaaaccaggag
agctatcttctctcagacatctttcaggacattggggacgatgatgacagcagtgaagtg
aacacatga
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