Ictalurus punctatus (channel catfish): 108255558
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Entry
108255558 CDS
T04658
Name
(RefSeq) DNA polymerase iota isoform X1
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108255558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108255558
Enzymes [BR:
ipu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108255558
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
108255558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
UBM
IMS_HHH_1
Corazonin
IMS_HHH
DUF4332
HHH_5
RecR_HhH
Cdd1
Motif
Other DBs
NCBI-GeneID:
108255558
NCBI-ProteinID:
XP_017307082
Ensembl:
ENSIPUG00000023243
UniProt:
A0A2D0PM23
LinkDB
All DBs
Position
22:886183..891611
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AA seq
662 aa
AA seq
DB search
MESEDEEEVEDSEWITLDTGFPAGRVEDNPRVILHFDMDCFYAQVEMIRNPALRSKPVGV
QQKYLVVTCNYMARAQGVTKMTSVEEALEKCPDLVLVRGEDLTFYREISYKVTELLMSYC
PLVERLGLDENFVDVTEMVESRRRNTDISELSFVGHVYGHDVSGVAVQDHVSLALGSVIA
SELREAVFSRLGLTSCAGVASSKLLAKLVSGTFKPNQQTTLLPQSVSQLMSSLSGPRRTP
GIGPRTAERLKALGVLSVRDLQLFPLRQLVCEFGEANAKRMQSLACGVDLSPVTPKGPPQ
SLSNEDSFMKISTLSEAESKISELLLSLSERMRKDGRLPQTMKLSLRRNGAPSRWFSRES
RQGPIPTHTAHRIINGCMEAVPQLVSIAMKLLHKLVDVREPFHLTMLNVCFTNLQAKTSN
RNTISSFFTSAHTHTHTSSTHSVCDAPSSFTQPETLCGTTNPQNNKQTSSSLSSSSSSSS
PFIQRPIRAASSVPPVPERSDPTPDSRSVNIKDLPPDVDPDVFRALPPHIQMELVSGFQE
DPVDRQERHSQSAPPSPRSDDLITQRRGESEEPGDVSAAERAPGGPDIPPNVDPYVFSQL
PPDMQRELRTEWRRGKPTLKMSPKHTSRRITTTTTRDKRPAAKRSHSGSLLKYFKPSSDK
RS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagaagacgaggaggaggtggaggacagtgagtggatcactctggacaccgga
ttcccagccggacgtgtggaggacaatcccagagtgatcctgcattttgacatggactgt
ttctacgcccaggtggagatgatccgtaatccagcgctgcgctccaaacctgtcggagtg
cagcagaagtacctcgtcgtcacctgtaactacatggcgagggcgcagggcgtgaccaaa
atgacgtccgtggaggaggctctggagaagtgtcctgacctggtgctggtcagaggagaa
gatctcaccttctacagagaaatctcctacaaggtcacagagctgctgatgtcatactgc
ccactagtggagaggctgggcttagacgagaactttgtggatgtgacggagatggtggag
agcaggaggaggaacacagacatctctgagctctccttcgtgggccatgtctatggacat
gacgtctccggcgtggccgtacaggaccacgtgagtctggcgctgggctcggtgatagcg
tctgagctgcgggaggcggtgttctccagactgggcctgacctcctgcgccggcgtggcg
agcagcaagctgttagctaaactggtgtcagggacgttcaaacccaaccagcagaccacg
ctgctgcctcagagcgtctcccagctgatgagcagcctgagcggaccgagaagaacgccg
ggaatcggtcccaggacagctgagagactgaaggctctgggtgtgctcagtgtgcgagat
ctgcagcttttccctctcaggcagttggtgtgtgagttcggagaagctaacgctaaacgc
atgcagagcctcgcctgcggcgtcgacctttcacctgtcacccccaagggtcccccacag
tctctgagtaatgaggactcgtttatgaaaatctccacactgagtgaagcggagagtaag
atctcagagctgctgctcagcctgagcgagaggatgcgtaaggacggcaggttgcctcag
acgatgaaactgtctctgagacggaatggcgcaccgagccgctggttcagccgagagagc
agacagggtcccattcccacacacactgcacacaggatcattaacggctgcatggaggcg
gtgcctcagctggtttccatagcgatgaagctcttacacaaactggtggacgtcagagag
ccgtttcacctgacgatgctgaacgtgtgttttaccaacctgcaggccaaaacgtccaac
aggaacaccatcagctccttcttcacctccgcgcacacacacacacacacctcctccacg
cacagtgtgtgtgacgcgccttccagctttacccaaccagaaactctgtgtggaaccacg
aacccacagaacaacaaacaaacatcctcatcattatcctcgtcgtcatcgtcgtcatct
ccgtttatccagcggccaatcagagccgcttcctcagtgcctcctgtcccggaacgttct
gatcccacaccagactcccgcagcgtgaacattaaggacctcccccctgacgtggacccg
gacgtgttcagagctctcccaccgcacatccagatggagctcgtgtccggcttccaggaa
gatccagtggacagacaggaacgtcacagccagtcggctccaccctcgccacgttccgat
gacctcatcacacagcgccgtggtgaatccgaggagccgggtgacgtcagcgccgcggag
cgagcacccggtggtcctgacattcctcctaacgtagatccgtacgtgttctcccagctt
cccccggacatgcagagagaactgcgtacagagtggaggcggggcaaacccacgctcaaa
atgtcgcccaaacacacgtccagacgcatcaccaccaccacgactcgagacaagagacct
gcggcgaagcgctctcacagcggcagcctgctcaaatacttcaaaccctcatcagataaa
cgctcctga
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