Ictalurus punctatus (channel catfish): 108255560
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Entry
108255560 CDS
T04658
Symbol
slc6a4b
Name
(RefSeq) solute carrier family 6 member 4b
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108255560 (slc6a4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108255560 (slc6a4b)
Transporters [BR:
ipu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
108255560 (slc6a4b)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
108255560
NCBI-ProteinID:
XP_017307084
Ensembl:
ENSIPUG00000023115
UniProt:
A0A2D0PM55
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Position
22:complement(1861213..1874780)
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AA seq
579 aa
AA seq
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MHHHDLSVSANTGPVPVPVILQTESRDKWGKKMDFLLSVIGFAVDLGNVWRFPYICYQNG
GGAFLIPYTLMAIFGGVPLFYMELALGQFHRTGAISIWKHICPIFKGIGFAICIIALYVS
FYYNTIIAWALFYFYSSFSSTLPWTNCDNAWNTENCTNYFGKDNVTWTNYSRSPAEEFYT
RNVLELHESDGLENVGVIRWQLMLCLFLIFTIVYFSLWKGVKSSGKVVWVTATLPYLVLL
ILLVRGATLPGAWRGVVFYLKPKWEKLKDTTVWVDAAAQIFFSLGPGFGVLLALSSYNPF
DNNCYRDAIVTSVVNCLTSFMSGFVIFTVLGYMAEQRHVNVEDVARNKGPSLLFITYPEA
IANMMGSTFFAIIFFAMMITLGLDSTFGGLEAIITAVMDEYPDFLSHRREVFVLGLVTVC
FLGSLSTLTKGGAYVVKLLEEFGVGSSIIAIVFLEATAVSWFYGINRFSNDVKAMLGYTP
GFFWRFCWVAISPTFLAYIIISALLNPAPLVMFDYTFPDWSITVGYIIGFSSFVWIPVYM
VYKLVWTPGSLKQRLAVCLRPERTLPDIHADTLGLTPVP
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcaccatcacgacttgtcggtgagcgcgaacaccggtccggttccggttccggtgatc
ctgcagacagagtcgcgcgacaagtggggcaaaaaaatggacttcttgctgtcggtgatc
ggctttgctgtggatctggggaacgtctggcggtttccttacatctgctaccaaaacggc
ggaggagctttcctcatcccctacaccctcatggctatatttgggggtgtaccactcttc
tacatggagctggctctgggtcagttccaccgcacaggcgccatctccatatggaaacac
atttgcccaattttcaaaggcattggtttcgccatctgcatcattgcgttatacgtctcg
ttctactacaacaccatcattgcgtgggcattgttctacttctactcatcattcagcagc
actctgccgtggacgaactgcgacaatgcatggaacacagaaaactgcaccaactacttt
ggcaaggacaatgtgacgtggactaactactcacgctcacctgccgaggagttttacacg
aggaacgtgttggagctgcacgagtcggacggtttggagaacgtgggtgtgatccgctgg
cagctgatgctctgcctgttcctcatcttcaccattgtctacttcagcctgtggaaagga
gtcaaaagttcgggcaaggtggtttgggtcacagccactcttccctatttagtgttgttg
attttgttagtccgaggcgcaacgttacctggagcctggaggggcgtcgtcttctacctg
aagcccaaatgggaaaaacttaaggatacaactgtttgggtggacgcagcagctcagatc
ttcttctccctcggcccagggtttggcgttctgcttgctctgtccagctacaacccgttc
gacaacaactgctacagagacgccattgtgacgagtgtggtgaactgcctgaccagcttc
atgtctggttttgtgatttttaccgttctgggctacatggccgagcagagacacgttaac
gtggaagatgtagccagaaacaagggcccaagtcttctgttcatcacttacccagaagcc
attgccaatatgatgggctccacgtttttcgccatcatcttctttgcgatgatgatcaca
ctgggattggacagcacgtttggaggtctggaagccatcatcactgctgtcatggatgag
tacccagactttctgtcccacaggagagaggtgttcgtgctgggcctggtgacagtgtgc
tttttgggctctctgagcactcttactaaaggcggtgcgtacgtagtaaaactacttgaa
gagtttggagtcggatcctccataatagctattgtgtttttggaagccaccgcagtctcc
tggttttatggcatcaacagattcagcaacgacgtcaaagccatgctgggatacacgccc
ggattcttctggaggttttgttgggtggccatcagccccacttttctagcgtacatcatc
atcagtgctctgctgaatccggccccgctggtgatgttcgattacacgtttcctgactgg
agcatcactgtgggttatatcatcggattctcatccttcgtctggatccccgtctacatg
gtgtataagctggtgtggacgcccggctcgctcaaacagcgtctggctgtttgcctgcgg
cctgaacgaacgctgcctgacatccacgcagacacgctgggtttgactccggtaccttaa
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