Ictalurus punctatus (channel catfish): 108255640
Help
Entry
108255640 CDS
T04658
Symbol
smad4
Name
(RefSeq) mothers against decapentaplegic homolog 4 isoform X1
KO
K04501
mothers against decapentaplegic homolog 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04068
FoxO signaling pathway
ipu04081
Hormone signaling
ipu04110
Cell cycle
ipu04310
Wnt signaling pathway
ipu04350
TGF-beta signaling pathway
ipu04371
Apelin signaling pathway
ipu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108255640 (smad4)
04350 TGF-beta signaling pathway
108255640 (smad4)
04371 Apelin signaling pathway
108255640 (smad4)
04068 FoxO signaling pathway
108255640 (smad4)
09133 Signaling molecules and interaction
04081 Hormone signaling
108255640 (smad4)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108255640 (smad4)
09144 Cellular community - eukaryotes
04520 Adherens junction
108255640 (smad4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
Motif
Other DBs
NCBI-GeneID:
108255640
NCBI-ProteinID:
XP_053530437
Ensembl:
ENSIPUG00000023608
UniProt:
A0A2D0PQ63
LinkDB
All DBs
Position
22:complement(72816..80945)
Genome browser
AA seq
551 aa
AA seq
DB search
MRASSGLLLFIIVINDGGINARAHSRLYSSQVTVSPWGVCVCARSMSVSSSDACLSIVHS
LMCHRQGGESESFSKRAIESLVKKLKEKKDELDSLITAVTTNGAHPSKCVTIQRTLDGRL
QVAGRKGFPHVIYARLWRWPDLHKNELKHVKYCQYAFDLKCDSVCVNPYHYERVASPGID
LSGLNLGGTGPSAGLLVKEEFDPQPSHSSSDVSHSIQTIQHQPAPSQPAPPTSTRPPLPE
TFSSPALMPPPEAGSSAPSPAFSSMAPTPASGGGSWPRGSGFPTNLTNPSGALQHHPPQY
WPVHNELIFQPPISTHPAPDYWCSIAYFEMDVQVGETFKVPSSCPVVTVDGYVDPSGGDR
FCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAGRA
PGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSVGGIAPA
ISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVLH
TMPIADPQPLD
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgagcagcggtcttctcctctttattattgttattaatgatggcggaataaac
gcacgcgcacacagcagactgtacagctctcaggtgactgtatccccatggggagtgtgt
gtgtgtgcacgcagcatgtcggtgtcgagcagtgacgcgtgtctcagcattgtgcacagt
ctgatgtgccaccggcagggtggtgagagtgagagcttcagtaaaagagccatcgagagt
ctggtgaagaaactgaaggagaagaaagatgaactcgactctctgatcaccgccgtcacc
accaatggagctcatcccagcaagtgtgttactatacagcgcacccttgacgggagacta
caggttgctggccgtaagggctttccccatgtgatctatgcgcggttatggcggtggcct
gatctccataagaacgagctgaaacatgtgaaatactgccagtacgcctttgacctgaag
tgtgacagtgtgtgtgtaaacccctaccactacgagagggtggcatcacctggtatcgat
ctgtctggactgaatctgggtggaacagggcccagtgcaggtctcttggtaaaggaggaa
tttgaccctcaaccgtctcactccagctctgatgtatcacacagtattcagaccatccag
catcagcctgccccctctcaaccagctccacccacttccacacgccccccactccctgag
actttcagcagccctgcacttatgccaccgcccgaggcaggaagctctgcccccagtcct
gctttctccagcatggctcctaccccggcctcaggtggtggctcctggccgagagggagt
ggctttccaacaaacctgaccaatccaagcggggctttgcagcaccacccacctcagtac
tggcctgtacataatgaactgatcttccagcccccgatatctacacatccagctccagat
tactggtgttctatagcgtattttgagatggatgttcaggtgggcgagacttttaaggtg
ccgtcttcatgtccggtggtgacagtggatggttatgtggatccatcaggaggagatcgg
ttctgcctgggccagctcagcaacgttcaccgcacagaggccatcgagagagccaggttg
cacattggtaaaggggtacagttggagtgtaagggtgagggtgatgtttgggtacgatgc
cttagtgaccacgccgtgtttgtccagagttattatcttgatcgggaagctgggcgtgca
ccaggtgacgctgtccacaaaatttaccccagtgcttacatcaaggtgtttgacctgagg
cagtgccaccggcagatgcagcagcaggcagcaacggctcaggcagcagcagcggctcag
gctgcagcagtcgcaggaaacataccaggacccggatcagtaggagggatagcaccagct
atcagtctatctgcggcagcaggtatcggggtggatgatctgcgacgtttgtgtattctg
cgcatgagttttgtgaaaggttggggtcctgattatcctcgtcagagcatcaaagagacc
ccatgttggattgagattcacctacacagagcgctgcagctgctggacgaggttctacac
accatgcctatagctgatcctcaaccacttgactga
DBGET
integrated database retrieval system
