Ictalurus punctatus (channel catfish): 108255657
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Entry
108255657 CDS
T04658
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108255657
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
108255657
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRN3
Polo_box_4
Motif
Other DBs
NCBI-GeneID:
108255657
NCBI-ProteinID:
XP_047017948
Ensembl:
ENSIPUG00000011601
UniProt:
W5U6G1
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Position
2:complement(37201792..37215653)
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AA seq
603 aa
AA seq
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MELERDFINTPPPKNVRFGDSIVNTLAKLKQGDTSDYEMIKRQLSDPDIKDAQIISWLQE
FRSCITQLDKEHEQLIYTVLRLPWLGRSHAVVDEYLVFLSNLISAQTVYLRSCLKTLVSN
LTPRRVKIQEGNVDISDSDDDDENLPRIFDHCHQALQMISRYVPSTSRFLMPILNSNFPF
VQKSSRTLECYVHNLLRITVYVPALRRDVLELIISKMLTLDVSAPRGEIEEVESSREQNQ
GAGAQDDFLFNMDEDESSPHDGGPLMLHAVADRLDTLMLVLLTYLKDMSHVNGVVDVERV
KTLYRDLVCVFDKLVLPTHASCHVQFCVFYLCSFRLGLAEAFLDHLWKVVQSPSQPAVLR
QAAASYMGSFLARAKFIPIATVRACLDLLVPWLHLYIDSQDSGSKAFCDVSVHGPFYASC
QAVFYTLIFRHRAILEGNMKKGLAYLQSLNLERIVMSQLNPLKVCLPAVTNMFAAIMRKY
QLVFCYTIIERNNRHMLPVVRSSVGGDSVCTSNNPLDTFFPFDPYLLKRSGQYFESIYQV
WEEPSDCMAAPKKEVKKNSTEEEDDFLHGETPQADMVIGSYESHVRSPSSVGSPPIAFLQ
RPF
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggagctggagagagatttcataaacactcctccacccaaaaatgtgcgcttcggggac
agtattgtcaacactctggccaaactcaagcagggagacacgagtgactatgagatgatc
aagcgtcaactttcagaccctgatattaaggacgctcagatcatcagctggctgcaggag
ttcaggtcgtgcatcacacaactcgacaaagaacacgagcagctgatctacacggttctg
aggctgccgtggctcgggcggagtcacgccgtggtggacgaatacctggtgttcctcagc
aacctcatctcggctcagaccgtgtacctgaggtcgtgtctcaaaaccctggtctcgaat
ttgacacccaggagggtgaaaatccaggaagggaacgtggacatatcggattcggacgac
gacgacgagaacctccccaggatattcgatcactgtcaccaagccctgcagatgatctca
agatacgttccgtcgaccagccggttcctgatgccgatcctcaacagcaacttccctttc
gtacagaaatcatccagaacactggaatgttacgttcataacctgcttcggatcacggtc
tacgttccggctctgagacgggacgtgctggagctcatcatcagcaagatgctcactcta
gatgtgagcgccccccgtggtgagatcgaggaggtggagagttcgagagagcagaaccaa
ggcgcaggggctcaggatgacttcctgttcaacatggatgaggacgagagctctccgcat
gacggcggcccgctgatgttgcacgctgtagctgaccgactggacacgctgatgttagtg
ctgctgacctacctgaaggatatgagccacgttaatggtgtggtggatgtcgagagagtc
aaaactctgtacagagatctggtgtgtgtgttcgataagctggtgctgcccacgcacgct
tcctgtcacgtgcagttctgcgtgttttacctgtgcagcttccgcctgggtttagctgaa
gccttcctggatcacctgtggaaggtggtacagagcccgtctcagcccgctgtcctccgc
caggccgccgccagctacatgggcagcttcctcgccagagccaagttcattcccatagcg
acggtgagggcgtgtctggacctgctggttccttggcttcatctctacatagacagccaa
gattcggggtctaaagcgttctgcgacgtttctgtgcacgggccgttctacgcctcctgc
caggccgtgttttacacactcatcttcagacaccgagccatcctggagggcaacatgaag
aaaggcttggcctatttacagagtttgaatctggagcggatcgtcatgagtcagctgaac
ccgctgaaagtgtgtctgccagccgtcaccaacatgttcgccgccatcatgaggaaatat
cagctggtgttctgctacacgatcatcgagcggaacaaccgccacatgttgcctgtagtg
aggagctcagtgggcggagactctgtctgcaccagcaacaatcctctggacacgtttttc
ccctttgacccgtacttactaaagagatccggacagtatttcgagtcgatctatcaggtg
tgggaggagccgagcgactgcatggcagctccgaagaaagaagtcaaaaaaaattctaca
gaagaagaagacgacttcctacatggtgaaactcctcaggctgacatggtgattgggtcg
tacgagtcgcacgtccgcagccccagcagtgtgggctctccacccatcgccttcctccaa
cggcccttctga
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