KEGG   Ictalurus punctatus (channel catfish): 108255693
Entry
108255693         CDS       T04658                                 
Name
(RefSeq) rab5 GDP/GTP exchange factor
  KO
K20131  Rab5 GDP/GTP exchange factor
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    108255693
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108255693
Membrane trafficking [BR:ipu04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    108255693
 Protein recycling
   Other Rab GTPase associated proteins
    108255693
SSDB
Motif
Pfam: VPS9 zf-A20 DUF5601
Other DBs
NCBI-GeneID: 108255693
NCBI-ProteinID: XP_017307313
Ensembl: ENSIPUG00000020340
UniProt: A0A2D0PL30
LinkDB
Position
22:complement(5961867..5969535)
AA seq 439 aa
MWAEQKRGIHVTQAELLCKDGCGFYGNPAWQGYCSKCWRKRTRTTETSKEDHGLQDEGSS
QLNLFKTEEKKNAEKGRRSSTIMRLFWGSSSPPRQESPEGQEAALKAFQSLEPGDFPGFL
KLLRKPSSQRLQSRCTAFLNTIDAYHDLPVQKQSDLVQDFYQNITVHFSGLPEPQVSHMM
EHVEKLIMTRLHKWVFCHDSCDDEQKDLTLQRRIKSLNWVTPEMLRVPFPQGGSDTSDPY
LPAITAIIEMDAKRAPQDKLACLSKCSQHVFQALASENRQPANADDFLSGLIYVVLRANP
PRLHSNINYIVRFGLPHSLMAGESGYYFTNLSCTVAFIEKLDGPALNLTPEEFNSCMQGR
RAPSGPAERAGQKRAQENREQLEQLKNRQEKIDQGARALQEQLDLWVRSVQDQIDEVRAQ
SVLVLKDDVAEVPPGETVC
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgtgggccgagcagaagcgagggatccacgtcacgcaggctgagctgctctgcaaagac
ggctgtgggttttacggcaacccggcctggcagggatattgttccaaatgctggagaaag
aggacacgcacgactgaaaccagcaaagaggatcatgggctccaggatgaaggaagttcc
cagcttaacttatttaaaaccgaggagaagaaaaatgcggagaagggtagaaggtccagc
actattatgcgacttttctgggggagttcttcaccaccacggcaagagtcacctgaaggc
caggaagcagccctgaaggcctttcagagcctggagcctggcgatttccccggctttctc
aaactgctgcgcaaaccgtcctcacagcgtctgcagtcccgctgcacagccttcctcaac
accatcgacgcttaccacgacctgcctgtacagaagcagtcagacctggtgcaggatttc
tatcagaatattactgttcacttcagtggtctgcccgagccgcaggtttctcacatgatg
gaacatgtcgagaagttgatcatgactcgtctccacaagtgggtcttctgccacgacagc
tgtgatgacgaacagaaggatctaacactccagagaaggatcaagtcgttgaactgggtc
actcctgagatgctgcgtgtgccttttccgcagggtggctcagacaccagtgacccgtat
ttacctgcaattacagccatcatcgagatggacgccaagcgtgcacctcaggataaactg
gcctgtttgtccaagtgtagccagcatgttttccaagcgctcgcctctgagaacaggcag
ccggcgaatgcggacgacttcctgtctggtctgatttacgtcgtgctgagagccaacccg
ccccgtttgcactccaacataaactacattgtccgcttcggcctgccgcacagcctgatg
gcaggagagagcggctactactttacaaacctgtcgtgcaccgttgccttcatcgagaag
ctggacggcccagctctgaacctcaccccggaggagttcaacagttgcatgcaaggccga
cgagcgccttccgggccagcagagcgggccgggcagaagagagcccaggaaaaccgcgag
cagctggaacaactgaagaaccgacaggagaaaatcgaccaaggcgcgcgcgctcttcag
gaacagctggatttgtgggtgcgttctgtgcaggaccagatcgacgaagtcagggctcag
tcagtgttggtcctgaaagacgatgtagctgaagtgccgcctggagagactgtgtgctga

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