Ictalurus punctatus (channel catfish): 108255693
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Entry
108255693 CDS
T04658
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108255693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108255693
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108255693
Protein recycling
Other Rab GTPase associated proteins
108255693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
Motif
Other DBs
NCBI-GeneID:
108255693
NCBI-ProteinID:
XP_017307313
Ensembl:
ENSIPUG00000020340
UniProt:
A0A2D0PL30
LinkDB
All DBs
Position
22:complement(5961867..5969535)
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AA seq
439 aa
AA seq
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MWAEQKRGIHVTQAELLCKDGCGFYGNPAWQGYCSKCWRKRTRTTETSKEDHGLQDEGSS
QLNLFKTEEKKNAEKGRRSSTIMRLFWGSSSPPRQESPEGQEAALKAFQSLEPGDFPGFL
KLLRKPSSQRLQSRCTAFLNTIDAYHDLPVQKQSDLVQDFYQNITVHFSGLPEPQVSHMM
EHVEKLIMTRLHKWVFCHDSCDDEQKDLTLQRRIKSLNWVTPEMLRVPFPQGGSDTSDPY
LPAITAIIEMDAKRAPQDKLACLSKCSQHVFQALASENRQPANADDFLSGLIYVVLRANP
PRLHSNINYIVRFGLPHSLMAGESGYYFTNLSCTVAFIEKLDGPALNLTPEEFNSCMQGR
RAPSGPAERAGQKRAQENREQLEQLKNRQEKIDQGARALQEQLDLWVRSVQDQIDEVRAQ
SVLVLKDDVAEVPPGETVC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtgggccgagcagaagcgagggatccacgtcacgcaggctgagctgctctgcaaagac
ggctgtgggttttacggcaacccggcctggcagggatattgttccaaatgctggagaaag
aggacacgcacgactgaaaccagcaaagaggatcatgggctccaggatgaaggaagttcc
cagcttaacttatttaaaaccgaggagaagaaaaatgcggagaagggtagaaggtccagc
actattatgcgacttttctgggggagttcttcaccaccacggcaagagtcacctgaaggc
caggaagcagccctgaaggcctttcagagcctggagcctggcgatttccccggctttctc
aaactgctgcgcaaaccgtcctcacagcgtctgcagtcccgctgcacagccttcctcaac
accatcgacgcttaccacgacctgcctgtacagaagcagtcagacctggtgcaggatttc
tatcagaatattactgttcacttcagtggtctgcccgagccgcaggtttctcacatgatg
gaacatgtcgagaagttgatcatgactcgtctccacaagtgggtcttctgccacgacagc
tgtgatgacgaacagaaggatctaacactccagagaaggatcaagtcgttgaactgggtc
actcctgagatgctgcgtgtgccttttccgcagggtggctcagacaccagtgacccgtat
ttacctgcaattacagccatcatcgagatggacgccaagcgtgcacctcaggataaactg
gcctgtttgtccaagtgtagccagcatgttttccaagcgctcgcctctgagaacaggcag
ccggcgaatgcggacgacttcctgtctggtctgatttacgtcgtgctgagagccaacccg
ccccgtttgcactccaacataaactacattgtccgcttcggcctgccgcacagcctgatg
gcaggagagagcggctactactttacaaacctgtcgtgcaccgttgccttcatcgagaag
ctggacggcccagctctgaacctcaccccggaggagttcaacagttgcatgcaaggccga
cgagcgccttccgggccagcagagcgggccgggcagaagagagcccaggaaaaccgcgag
cagctggaacaactgaagaaccgacaggagaaaatcgaccaaggcgcgcgcgctcttcag
gaacagctggatttgtgggtgcgttctgtgcaggaccagatcgacgaagtcagggctcag
tcagtgttggtcctgaaagacgatgtagctgaagtgccgcctggagagactgtgtgctga
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