Ictalurus punctatus (channel catfish): 108255780
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Entry
108255780 CDS
T04658
Name
(RefSeq) vesicle-associated membrane protein 3
KO
K13505
vesicle-associated membrane protein 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04130
SNARE interactions in vesicular transport
ipu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108255780
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108255780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108255780
Membrane trafficking [BR:
ipu04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
108255780
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
RIFIN
Mobilization_B
DUF2207_C
TMEM_230_134
DUF6548
DUF2721
EMP24_GP25L
UL45
ECSCR
DUF6584
LRR19-TM
SHE3
Motif
Other DBs
NCBI-GeneID:
108255780
NCBI-ProteinID:
XP_017307475
UniProt:
A0A2D0PQW4
LinkDB
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Position
22:complement(2441080..2444399)
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AA seq
103 aa
AA seq
DB search
MEKGKGQLQQLQEDADQVVVIMQKNFNKVGEREEKLEELDKRADALLETGKQFRKSTRKL
KQKTETENARLRCKNWRVIAGVVALIIIITIVIIIIIAVLWPR
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggagaagggaaaaggccagctgcaacagcttcaggaggatgcggaccaggttgtggtc
atcatgcagaagaacttcaacaaggtcggagagcgtgaggaaaagctagaggaactggac
aagagagctgatgcgctgttagagactggcaagcagtttcgaaagtcaacaaggaaactg
aaacagaagacggaaaccgagaacgccagattgcgatgtaagaactggagggtgatcgct
ggagtagttgctctgatcatcattatcaccattgtcatcattatcatcattgcagtattg
tggccgcggtaa
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