Ictalurus punctatus (channel catfish): 108255797
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Entry
108255797 CDS
T04658
Symbol
notch1b
Name
(RefSeq) neurogenic locus notch homolog protein 1b
KO
K02599
Notch 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108255797 (notch1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_3
Ank_5
Ank_4
EGF_DL_JAG
EGF_3
EGF_Teneurin
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
108255797
NCBI-ProteinID:
XP_017307516
Ensembl:
ENSIPUG00000014744
UniProt:
A0A2D0PQ05
LinkDB
All DBs
Position
22:complement(9850221..9893523)
Genome browser
AA seq
2482 aa
AA seq
DB search
MHLFLVNLIRVISLIALTHGLKCSEKCQNGGTCVATADGRGECKCPDKYLGPACQFSNPC
LSNPCWNGGICQANIRDNKVDYVCRCPLGYMNPRCLTPTENPCRSSPCGNGGLCELTSVH
TFKCKCSPGWTGKNCQQADPCASNPCANGGQCSIFDSQYICTCTPFFSGETCKQDVNECA
QFPSPCKNGGVCVNEVGTYRCNCPAEYTGKHCETLYQPCNPSPCHHGGTCVQNGGTNYEC
SCLPGFSGQNCEENIDDCPDHRCLNGGTCVDGVNTYNCQCKPEWTGQFCTEDVNECDLMP
NSCQNGGTCLNTQGGYNCVCVNGWSGDDCSKNIDDCVDAACHTGSTCHDRVASFFCECPA
GRTGLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPTGYFGLACDQDVDECSLGSNPC
EHAGKCLNTKGSFHCKCLQGYVGARCELDVNECMSSPCQNDATCLDQIGGFHCICMAGYE
GVFCQINTDECDSMPCLNNGKCIDKINNYQCECPKGYSGNQCQVDIDECASTPCKNGAKC
IDGSNMYTCQCTEGYTGQHCEADIDECLSNPCHYGTCKDGLAGFTCQCHLGYSGRLCEAN
INECLSQPCQNGGTCQDRANSYLCVCPRGTSGVNCEVNLDDCKSSPCDYGKCIDKINGYE
CACEPGYTGKMCNINIDECAINPCQNGGTCIDGVNGFTCQCLDGYHDPTCQSQLNECLSN
PCIHGHCEDKVNGYNCICDSGWSGTNCDINNNECESNPCMNGGTCKDMTSGYVCTCQAGF
SGPSCQMNINECASNPCLNQGTCIDDVAGYKCNCVLPYTGDKCETLLDPCSTKPCKNGGA
CKESEDYERFSCVCPEGWQGQTCEIDINECVKNPCLNGAICQNAIGSYKCNCKSGYTGRN
CETDIDNCTPNPCSNGGFCKDGVDTFTCTCLLGFRGPKCEEDINECESNPCKNGANCTDC
VNSYTCTCLPGFSGIHCETNTQDCTESSCFNGGTCVDGINTFSCLCLAGFTGNYCQHDIN
ECDSKPCMNGGTCQDSYGTYKCTCPHGYHGFNCQDLVNWCKPSPCKNGGTCRQSGTTYTC
LCQTGWTGLYCDVPSVSCEVAAKQRGVDVARLCRNSGQCLDAGNTHYCQCQAGYTGSYCE
EQVDECIPNPCQNGAMCTDYLGGYSCECLPGYHGVNCSNEINECLSQPCQNGGICIDLVN
AYKCSCPRGTQGVHCEINIDDCTPFTDPVTQEPKCFNKGRCVDRVGGYHCECPLGYVGER
CEGDVNECLSNPCDPRGTHSCVQLTNNYRCECRTGYTGLRCDTVFDGCKGKPCRNGGTCA
VASNTPHGFICKCPPGFTGSTCEYDAYSCGSLHCHNGGTCISGQKAPLCLCPPGFSGPEC
QHTSDGYCTSKPCYNGGTCKANPEAAPYFHCVCPKTFNGLLCHILDYNFVGGIGRDIAPP
PKVVASCPVAECAAKKGNEFCDSACNRYECEWDGGDCSLNFHDPWKNCSASLQCWRYFNN
GHCDKQCHNAGCLFDGFDCQTSSGECNPLYDQYCKDHYADGHCDQGCNNAECDWDGLDCA
ENVPEKRAEGHLVLVVQLPPEQLRNNSSSFLRELSRLLHTNVVFRLDLHGELMIYPYYGS
THELKKHNIKRSLDSRSDIFGSSHHDQDSAQVKSSVVYLEIDNRQCYQQSTECFQSATDV
AAFLGALASSGNLNMPYIKAVRTESDQDQPTSELYPVYVVLAGLALLAFVVVGMVASRKR
RREHGQLWFPEGFKTSEPSKKKRREPVGEDSVGLKPLKNSDISLMDDNQNEWGEEEPADT
KRFRFEEPAILNLEDQQDHRQWTQQHLDAADLRIPSIAPTPPQGENENDCMDVNVRGPDG
FTPLMIASCSGGGLETGNSEEEEDASANVINDFIYQGANLHNQTDRTGETALHLAARYAR
SDAAKRLLEASADANIQDNMGRTPLHAAVASDAQGVFQILIRNRATDLDARMHDGTTPLI
LAARLAVEGMVEELINCHADVNAIDDFGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNK
EETPLFLAAREGSYETAKVLLDHFANREITDHMDRLPRDIAQERMHHDIVRLMDEYNLVR
SPPMPSANMSSTLSPPLCSPNAYLSGMKPSIQSKKARKPGAKGMACKDPKDLKAKKKKPQ
DGKGSLLDSSAVLSPVDSLESPHGYISDVASPPLMPSPFQQSPSMPLNHLQVSDGHVGVN
HLSMAGKQELARLQFDPLPPRLTHLPVGGSNGSAAMNGQCDWLNRMHASLSQQGQFGAMR
NIPGQGGMCQSNQHPLMTSLHNGVPANALPQLLTYQGLTSAHLATQPHILQPQQMQPNNL
QQQQQASIQLQHQNSNPNQNLSSSQNFISNEQQQSTGSSVPIHTILPQETQLLNAQTLAP
GMASTQFLTPPSQHSYSGAMDTNTPSHQLQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWS
EGISSPPTSMHSQISHIPEQFK
NT seq
7449 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttttcctcgtgaacctgattcgtgtgatttcgctgattgctttgacacatggt
ctgaaatgttctgagaaatgccaaaacggaggtacgtgtgtggctactgcagatggaaga
ggagaatgcaagtgtcctgacaaatatttgggcccggcttgtcagttttccaacccttgc
ctgtcgaatccttgctggaatggaggcatttgccaggcaaatatccgtgacaacaaagtg
gactatgtctgccgttgtccattgggttacatgaacccacgatgcctcactcccactgaa
aacccatgccgaagctccccgtgtggaaatggagggttgtgtgagctgaccagtgtccac
acattcaagtgcaaatgttctccaggctggactggtaaaaactgccagcaggctgaccct
tgtgcttcaaacccttgtgccaatggaggccagtgcagtatatttgattctcagtacatc
tgcacctgcacgcccttcttctcaggcgagacttgcaaacaagatgttaacgagtgtgct
cagttcccatctccctgcaagaacggcggtgtgtgcgtgaacgaagtgggcacctatcgc
tgcaactgcccagccgaatacacggggaaacactgtgagactctgtaccagccctgcaac
ccatcaccatgtcatcatggcgggacctgcgtccagaacggaggcacaaactacgagtgt
tcctgtctgccaggtttcagcggccaaaactgtgaggagaacatcgacgactgtccagac
catcgttgccttaatggaggaacttgcgtagatggggtgaacacctataactgccagtgc
aaaccggaatggaccggtcagttctgtaccgaagatgtcaatgagtgcgacctgatgccc
aactcctgtcagaatggtggcacttgcctcaacactcaaggtggatacaactgcgtgtgt
gtgaatggctggtcaggtgatgactgcagcaagaatatcgatgattgcgttgatgccgcc
tgccacacaggatcaacgtgtcatgatcgcgtagcgtcctttttctgcgaatgcccagct
ggacgcacaggtttgctgtgtcacttggatgatgcttgcattagtaacccctgtcagaaa
ggctcaaactgtgacaccaacccagtcaatggcaaggctatctgtacctgtcctacaggc
tactttggcttagcctgtgaccaggatgttgatgaatgctccttaggttcaaacccatgt
gagcatgctgggaagtgtctgaacactaaaggctcattccactgtaagtgtcttcagggc
tacgtaggggctcgatgcgaactcgacgtcaacgagtgcatgtccagcccgtgccagaat
gatgctacctgcctggaccaaattggaggcttccattgtatctgcatggcaggatacgag
ggagtcttttgccagatcaatacagacgagtgtgatagcatgccctgtctcaacaatggg
aagtgcatcgacaagatcaacaactaccagtgcgagtgtcccaaaggatattctgggaac
cagtgccaggttgacatcgatgagtgcgccagcacaccctgcaaaaatggcgccaagtgt
atcgacgggtccaatatgtacacctgccaatgcactgagggttacacaggacagcactgt
gaggctgatatcgatgagtgtctgtccaatccgtgtcactacggcacctgtaaggatggc
ctagccggcttcacctgccagtgccacctgggctattccggtcgactgtgtgaagccaac
atcaacgagtgtctgagccaaccctgccagaacggaggcacctgtcaggaccgggcaaat
tcttacctatgtgtttgtcctagaggaacctcaggtgttaactgtgaggtcaatctggac
gactgtaagagcagcccatgtgactatggcaagtgcattgacaagatcaacggatacgag
tgtgcctgcgagccgggatacacaggaaaaatgtgtaacatcaatatcgacgagtgtgcc
atcaacccctgtcaaaacggaggaacgtgtattgatggagtcaacggtttcacctgtcag
tgccttgacggctatcatgaccccacctgtcagtctcaactcaacgagtgtctcagtaac
ccttgcattcatggacactgcgaagacaaagtcaatggttacaactgtatttgcgattcg
ggttggagcggcaccaactgcgacatcaacaacaacgagtgcgagtccaacccctgcatg
aacggtggcacctgtaaggacatgaccagtggttatgtgtgcacctgccaagctgggttc
agcggtcctagctgccagatgaacattaacgagtgtgcttcaaacccatgcttaaaccag
gggacttgcatcgacgatgtggctggctacaaatgcaactgcgtgctgccttacactggt
gacaaatgtgaaaccttgttagacccttgcagtaccaaaccctgtaaaaatggtggggcg
tgtaaggaatcagaagattacgagagattctcatgcgtgtgccctgaaggctggcaaggt
cagacctgtgagattgatatcaacgagtgtgtgaaaaacccatgtctcaatggcgccatc
tgtcagaacgccatcggcagctacaagtgcaactgcaagtcaggctacactggccgcaac
tgtgagacagacattgacaactgcacgcccaacccgtgcagtaacggtgggttctgcaag
gatggcgtagacacattcacatgcacttgcctcctgggattccgtggtcccaaatgcgag
gaggacatcaacgagtgcgagagcaatccatgcaagaacggagccaactgcacagactgc
gtgaacagctacacctgcacgtgtctgcctggtttcagcggcattcattgcgagaccaac
acacaagactgcaccgagagttcttgctttaacggtggcacctgcgtggacggcatcaat
acattcagctgcctgtgtctggctggcttcacgggcaactactgccagcatgacatcaac
gaatgcgattcaaaaccatgcatgaatggtggcacatgccaggacagctatggcacgtac
aagtgcacctgccctcatggctaccacggtttcaactgccaggacctggtgaactggtgt
aagccgtctccttgtaagaacgggggtacctgcagacagagcggcactacttacacttgc
ctgtgtcagacaggctggactggcctctactgtgacgtccccagcgtctcctgcgaggtg
gcagctaaacagcgaggtgtggatgttgccagactgtgccgtaactctggtcagtgtctg
gatgctggaaacacacactactgtcagtgccaggcaggatacactggcagctactgtgag
gagcaggtggacgagtgcatccccaacccttgccagaacggagctatgtgcactgattac
ttaggaggatattcttgtgagtgtttgccaggttatcatggagtaaactgctccaatgag
atcaatgagtgcctttcgcagccctgccagaacgggggcatctgcatcgacctcgtcaat
gcctacaaatgctcctgtcccagaggaacccaaggtgttcactgtgaaatcaacatcgat
gactgcacaccttttactgaccccgtgacccaggagcccaagtgctttaacaagggacgc
tgtgtggaccgtgttggcggctaccactgcgagtgcccacttggctacgtgggagagcgt
tgtgaaggagacgtcaacgagtgcttgtctaacccctgcgacccacgcggcacccacagc
tgcgtccagctcaccaacaattaccgctgcgagtgccgcaccggatacacaggtctgcgc
tgtgacactgtgtttgatggctgtaagggcaaaccgtgccgaaatggagggacctgtgct
gtagccagtaacactcctcatggcttcatttgtaaatgtcctccaggcttcactggctca
acctgcgagtatgacgcttattcgtgtggcagcctacactgtcataatggtggcacctgc
atctcaggccagaaagccccactgtgtctgtgcccaccaggctttagtggcccagagtgc
cagcacacatctgatgggtactgcacttccaagccctgctacaatggaggcacgtgcaaa
gccaacccagaggcagcaccctacttccactgtgtgtgcccaaagacgttcaacggcctg
ttgtgccacattctggactacaatttcgtcggcggcatcggccgagacatcgctccaccg
cccaaagtggttgccagctgcccggtagctgagtgtgcggctaagaagggcaacgagttt
tgcgacagcgcctgcaacaggtacgagtgtgagtgggacggcggcgactgctcactcaac
ttccacgatccgtggaagaactgctcggcttcgctgcagtgctggcgctacttcaacaac
ggacactgtgacaaacagtgtcacaacgctggctgcctcttcgatggtttcgactgccag
acgagcagcggcgagtgcaacccgctgtacgatcagtattgtaaagaccactacgcggac
ggtcactgcgatcagggctgcaacaacgcagagtgcgactgggacggactggactgcgcc
gagaacgtacccgagaagcgtgcggaaggccatctggtgctggtggtgcagttgccgcct
gagcagctacgcaacaactcgtcatctttcttacgcgaactgagccggctgctgcacacc
aacgtggtgttccggctggacctgcacggcgagcttatgatttacccgtactacggcagt
acgcatgagctcaagaagcacaacatcaagcgctcgctggactcacggtctgacatcttt
ggctcaagccatcacgaccaagacagcgctcaggtcaaaagctcggtggtgtatctggag
atcgataaccggcagtgctaccagcagtcaaccgagtgcttccagagtgctaccgatgtt
gctgccttcttgggagcccttgcctccagtgggaacctgaacatgccgtacatcaaggcc
gtcagaactgagagtgaccaagaccagcctacctcagagctgtacccggtgtatgtggtg
ctggccggcctggcactgctggccttcgtggtcgtgggcatggtggcttcccgtaagcgg
agacgagagcacggtcagctctggttccccgagggctttaaaaccagcgagcctagcaag
aagaagcggagagagcccgtcggcgaggactccgtcggcttgaagccactgaagaactcc
gatatttcactaatggatgacaatcagaatgaatggggagaggaagagccagcagacacc
aagcgctttaggtttgaggagccagcgatattgaatctggaggaccagcaggaccatcgg
cagtggactcagcagcacctggacgcagctgacctgcggatcccctccatagcccccacg
cctcctcaaggcgagaacgagaacgactgcatggacgtcaatgtcagaggaccagatgga
ttcactcctctaatgatcgcctcctgtagcggaggaggcctggaaaccggcaacagcgag
gaagaggaggatgcctctgccaatgtcataaacgacttcatctaccagggcgctaacttg
cacaatcagacggaccgcacaggtgagaccgctctgcacctggctgcgcgctacgcccgc
tctgacgctgctaagagactgctggaggccagcgcagatgccaacatccaagacaacatg
ggccgaactccactacatgctgccgtggcttcagatgcacaaggggtcttccagattctg
atacggaaccgtgcaacggatctcgatgcccgtatgcatgacggcactactcctctgatc
ctggcagccagactggcggtggaaggcatggtggaggaactgatcaactgccacgctgac
gtcaatgccatcgatgactttgggaaatctgcactgcactgggctgctgctgtgaacaat
gtggacgcagctgtagtactgcttaagaacggagccaataaagacatgcagaacaacaag
gaagaaacgccactgttcctggcagccagggaaggcagctacgagacggccaaagtgctg
ctggaccacttcgctaaccgtgagatcaccgaccacatggaccggctgccccgtgacatt
gctcaggaacgcatgcaccatgacatcgtgcgcctcatggacgagtacaacctggtgcgg
agcccgcctatgcccagcgctaacatgagctccacgctctcacctcctttgtgctcgccc
aatgcgtatctgagtggcatgaaaccgtccatccagagcaagaaagccagaaagcctggt
gccaagggtatggcttgcaaggatcccaaagacctgaaggccaagaaaaagaagccacag
gatggtaaagggagcttgttggacagttcagctgtgctctcgcctgtcgattctctcgag
tcgcctcacggctacatttcagatgttgcctcgccgcctctgatgccctcgcccttccag
cagtcgccctccatgccactaaaccacctgcaagtttccgacggtcatgtgggagttaac
cacctgagcatggctggaaagcaggagctggcacgcttgcagttcgatcccttgcctccg
cgtctcacacacttgcccgtgggtggatcgaacggatcagcagccatgaacggtcagtgc
gattggctgaacaggatgcatgctagcctgagtcagcagggtcagttcggagccatgagg
aacatcccgggccagggtggcatgtgccaatccaaccagcacccattgatgacatcactc
cacaacggcgttcctgccaacgcgctgccgcaactgttgacctaccagggcttgaccagt
gcccacctcgcaacacagccacacatcctacagccgcagcaaatgcaacccaacaaccta
caacagcagcagcaagccagcatccagctgcagcaccagaactcaaacccaaatcagaac
ctgagcagcagccaaaacttcatcagcaacgagcagcagcaaagcacagggagcagcgtc
cccatccacacaatcctccctcaggagacgcagctcctcaatgctcagacgctggctccc
ggaatggccagcacacagttccttacacccccatcacagcacagctattcaggtgccatg
gacaccaacacacccagccaccagcttcaggtgcccgatcatccctttctcacaccatca
ccaggctcacctgaccagtggtccagctcttcgccccactccaacatgtctgactggtct
gagggcatctccagcccacccacaagcatgcactcccaaatctcacacattccagagcag
tttaagtga
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integrated database retrieval system
