Ictalurus punctatus (channel catfish): 108255811
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Entry
108255811 CDS
T04658
Symbol
clip1a
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
108255811 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108255811 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108255811 (clip1a)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
108255811 (clip1a)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
108255811 (clip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
TMEM52
Motif
Other DBs
NCBI-GeneID:
108255811
NCBI-ProteinID:
XP_017307550
Ensembl:
ENSIPUG00000020062
UniProt:
A0A2D0PQ38
LinkDB
All DBs
Position
22:6091831..6124108
Genome browser
AA seq
2257 aa
AA seq
DB search
MSTAKPSGLKAPSKISKPAGTGTTKTSPSTAAKAVPGDKASSENQDAAEEFKVGDRVWVN
GNKAGCVQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQSEPLRGIFTRPSKLSRT
EGEANGTTTAPASPTPSTTAPQTAPQTAPAAAPAASAETNKSTNPASNLTCSNSESVSNL
SEAGSVKKGERELKMGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAG
TRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKATARKVTTPAGLKRSPSASSISSMSSV
ASSVSGKPSRSGLLTETSSRYTRKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKAT
SQVGEVEQELSILREGQEQYVAEMEAKMDQLRALVEAADRDKVELLNQLEEERRRVEDLQ
FRVEEACITKGDLETQTRREHALLKELEQSLLFEKTKAEKLQRELEDSRVATVSEKSRIL
ELERDLALRDKEVAALRQHLEAGPGQGTSTGDPAAPVLQEELGLLRTQLSSQAASHQTAL
AALHTKLEAETVAHREALAQLQASSALLSKDNEQLHARLAEAEKENADAIELWQAKLASA
VTSHQQAMEELKASPGSGTGDSGELVKLLETLERLKLQHKGQLEESLAKHTAEAKRWTQD
VDELRKQLHAVTEEKERLVESLRTNLESAEDQHLVELEEALGKLHNAEVRVKELEEDNSK
LGHQVEEKALEVQEQNALIQTLRSHQSQGDQDVQSLLARVEEAEREARVQEGKVTEVMSM
LNSKQKELDGLQQNLASLQQTKSSLEQELSDLKQKVTASLDEQSASSQAVQKLQEALSKK
EEQCASLSSESEKLKVQLSGLEAKLKSGEEKLEQLTKDKAKLEDNISELIKSSGDSSTQL
TKMNEDLTQKERRLEELQNQLSEQKELIARSDESRSQEQARAKKEMNDANERHQEEVFSL
REKIKQLEKNVEETQAKVHDAQASGEKALASALQNQAKELQGQVEAAQQQCRISEEKCQK
LKEDLEELAPFKEKAQSLTTELACSMQGAEKLASEVGELRLLSERLSKERDDVRAQKENA
EKQIVEYGTKISSLEEVRKDLSSKNDELKASNEQVTNEIKELCSTNQQLQEEKSSLNNEK
ELLSKDVQNLIRVQEEMKAENASLKETKAQQIIQIEDLEKHKAEQQKVLLKYQQELQHHE
KNSAALTQEHTKACEVRDKFQEELRSCQEELQSSRLLCAQNEELQSKLQAEKEELSARNA
TLQAETELLRNENEKLGSDLKTAVSDMESLAAEKSELQNQLDAVKIKLEQFSRDNAELQA
SKNSFARMFEEIKTSREVTDSERLLLMEEKENLLETQRKLSSEKQELTKQIEVLVEKLRL
STEEAKAANEKIHLNTAAFAQEKQTINAKLSETDKILQALEQEKITLKSALEKQNNEQQH
LEQKLSSLKKKYEEEKASVLAEKKQSEADLLSEKNSLKSELDKMKQINEQMESEKVKLHR
DHDDLQNLLQKKSSDVESLEKSNVSLTEQNQKLKLNLDHMKEEYAQNADTFEKEKISLNS
TIEELKKTNSDLLQKVEHLSDQNRSLSDAKNTLEAQQQALEMDKNEFSVVTENLSKKVEE
LMNKVSESEKERASLLEDKSKLDGDLVAIRTEKEKTEREQELLSNKVEQLWNSLNDTCLE
KITNLQNLNQTSVSSCQKVEEIFGALQKVSEEKTSLAKEIELIKTQQKRSDEDRSDMAVA
KEVLASKLAELEKTTACLVKEKTDILESHASLEREVLSLRQSVETGEKKCSEYLIKIEEL
KKSQLELEAKLQNLHNDNVKLEEQQQVAEKQVTLLSKAKDEIVSSLTAVQAERDALQAEK
EEANVMVTQLEAQNKSALAKQLEAAASAGHTAQALDKLTQEKLALQKEKLEAEALIQEFK
NAKEGTQNQLDNLSKQNSEYQQELSKAKEQLGSEKKRISSLYKEIEELKKAACENTLAVE
AVKQEKAKLAEDLSSSQKENDSQRKLKEQLTRLRSQMKDMEKRELALKNESDTEKSSLQQ
SIQKNSALILEKNKELETLRNEVSVLRSEISAASTLQRTVKSLESDKAQLQERMRALEKS
LTAAQTSSPAAQASSPADTPTGSSALDKMREAKETAECQVEFLNSVIVELQRKNEDLKSK
LEKMAEAALNGNTASEMDNHESLSEPQAKKKLPPRLFCDICDCFDLHDTEDCPTQEQLPD
SPPHTTYHGSASEERPYCDICEVFGHWTESCNDDQTF
NT seq
6774 nt
NT seq
+upstream
nt +downstream
nt
atgagtacggccaagcccagcgggctcaaagcccccagcaagatcagtaaaccagctggg
accgggaccacaaagacgtccccatcaactgctgctaaagcagttccaggtgacaaagcg
tcatctgaaaaccaggacgcagctgaagagtttaaagtcggggaccgagtgtgggtgaat
gggaacaaggcaggctgcgtccagttcctgggagagacccagttcgccccgggacaatgg
gccggcattgtgttggacgagccaataggaaaaaacgatggttcggtggcaggagtgcgc
tactttcaatccgaaccgttgaggggtatttttacaagaccttccaagctttctaggact
gagggtgaagctaatggaaccacaacagcgcctgcatctccaacaccctccacgacggca
ccacagacagcaccacagacggcgccagcagccgctccagcagccagcgcagaaaccaac
aaatctaccaatcccgcctcgaacctgacttgctctaattccgaatctgtgtccaaccta
tcagaggcaggctcagtgaagaaaggagaacgggagctgaagatgggcgaccgtgtcctg
gttggtggtacaaaagctggtgtagtacgcttcttaggggaaacagattttgccaaaggc
gagtggtgtggagtcgagctggatgagcctttagggaaaaacgatggtgcagtggctgga
accaggtacttccagtgtcagcccaagtacggcctttttgccccagtgcacaaagtgacg
cgcatcggcttcccttccactactccagccaaggcgaaggcaacagcgcggaaggtgacc
acgccggcaggtttgaaacggagcccgagcgcttcctccatcagctccatgagttctgtg
gcctcatctgtgagcggcaagcccagccgcagcggtctgctgacggagacgtcatcacgg
tacacgcgtaagatctctgggaccaccgcgctgcaggaggcgctgaaggagaagcagcag
cacatcgagcagctccttgctgagcgtgacctggagcgggccgaggtcgctaaagccacc
agccaagtaggagaagtggagcaggagctcagcattctccgagaaggtcaagaacagtat
gtggcggagatggaggccaaaatggatcagctgcgtgccctggtggaagctgcagacagg
gacaaggtggagcttttgaatcagctggaggaagagaggagaagagtggaggaccttcag
tttcgtgtggaagaggcttgtattaccaaaggagacttggagacgcagaccagacgggag
catgccctccttaaggagctcgagcaaagtctgctctttgaaaagaccaaagctgagaaa
ctccagagggagttagaagactctagggttgctacagtctctgagaagtctcgcatcctt
gaactggaacgggaccttgctttgagggacaaggaagtggctgcccttcggcaacacttg
gaggctggtcctggacaaggaacttccactggggacccggcagctccagtcctccaggaa
gagctcggtttgcttcgtacccagctctcctctcaagctgctagccatcagacagcatta
gctgccttgcataccaagctggaagcagaaacagtggcacaccgcgaggctttggctcaa
ctccaggcctcttcggcgcttttatcaaaagataacgagcagctccatgcccgattggca
gaggcagaaaaggagaacgcggatgccatcgagctgtggcaagccaagctagcttcagcc
gtcacgtctcaccagcaagccatggaggagcttaaggcctccccaggttcggggaccgga
gactccggagagctcgttaagctgctagaaactttggaaaggctaaagttgcagcacaaa
ggacagctagaagaaagcctagctaagcacactgccgaagccaagaggtggacacaagat
gtcgatgagctccggaagcagctgcatgctgtgacggaggagaaggagcgtctggtggaa
tctctccgcactaacctggagagcgccgaggatcagcacctggtcgagttggaggaagct
ttgggcaagctgcacaacgctgaggtccgggtaaaagagctagaggaggacaactctaaa
ctgggacaccaggtggaggagaaagctctggaggtccaggagcaaaatgctctaattcag
acccttcgctctcaccagagccaaggtgaccaggatgtccaaagtctgttagctcgagtt
gaggaagcagagcgtgaggcccgtgtgcaagagggaaaggttactgaggtgatgtccatg
ctgaacagcaagcagaaggagctggatggactgcagcagaacctggcctccctgcaacaa
accaagagctcgttggagcaagagctttctgatttgaaacaaaaagttacagcgtcttta
gacgaacagtcggcgtcctcacaagctgttcagaagttacaggaagcgctcagtaaaaag
gaggaacaatgcgcgtctctttccagcgaatccgaaaagctcaaggttcagctttctggt
ttggaggcaaagttgaaatccggtgaagagaagcttgagcagttaaccaaagataaagct
aagcttgaagacaacatcagcgagctgataaagtcatccggagacagctctactcagctg
accaagatgaatgaagatctcacgcagaaagagaggagactggaggagcttcagaatcag
ctttcggagcagaaggagttgatcgctcggtctgatgagagcaggagtcaggagcaggct
cgagcgaagaaggagatgaatgatgccaatgagagacaccaggaagaagttttcagcttg
cgtgagaagatcaagcagctggagaagaatgttgaggagactcaagctaaggtccacgac
gcccaggcctctggagagaaagcacttgccagtgccttacagaaccaggcgaaggagcta
cagggtcaggttgaagcagcacaacagcagtgccgcatctctgaggagaagtgccagaaa
cttaaagaagacttggaggagttggcgccctttaaggaaaaggctcagtctctcactact
gaattggcttgttccatgcaaggggctgagaagcttgcttctgaggttggcgagctaagg
ttgttgtctgaacgtctgtctaaggaaagggacgatgttcgtgctcagaaggaaaatgcg
gaaaagcaaattgtagaatatggcacgaagatctctagcctggaggaggttcggaaggat
ctctcatcaaaaaatgatgagctaaaagcatctaatgagcaagtaacgaatgaaattaag
gaactgtgttccaccaatcagcagctgcaagaagaaaagtcatctctcaacaatgagaaa
gaactgctttccaaagatgtacagaatttaatacgagtccaggaagaaatgaaagctgag
aatgcaagcctgaaggagactaaagcacagcaaattattcaaatagaagatcttgaaaag
cataaagcggagcaacaaaaagtcctactgaaatatcagcaggagcttcagcatcatgag
aaaaatagtgctgcgctgacccaagagcacaccaaggcctgtgaggttagggataagttt
caggaggaacttagatcctgccaggaggagctgcagtcctctcgattgctgtgtgcacaa
aacgaagagcttcaatcaaagctgcaggccgaaaaagaggagctctccgctaggaatgct
acgttgcaggcagaaaccgaacttctccgtaatgagaatgaaaagctggggtcagatctc
aaaactgccgtttccgatatggagtctcttgcggctgaaaaatcagaacttcagaatcaa
ctcgatgccgtgaagataaaactagagcagttcagcagggacaatgctgagctccaggcc
tccaagaacagctttgccagaatgtttgaggaaatcaaaactagcagggaagtcacagac
tccgagaggcttttactcatggaagagaaggaaaaccttcttgaaacccagaggaaactg
tcttctgaaaagcaggagcttactaaacaaatagaagtcctggttgaaaaattgcgtctc
agtacagaagaagccaaagctgccaacgagaagatccatctcaatacagcagcttttgct
caggagaagcaaacgattaacgcaaagctttcagagaccgacaagattcttcaagccctt
gaacaggaaaaaatcaccttaaaatctgctctcgaaaagcaaaataatgaacagcagcac
ttggaacaaaaattgagcagtttgaagaagaagtacgaagaggaaaaggcttccgtctta
gcggagaaaaagcaatcggaagctgacttattaagtgagaagaacagtctgaaatcagag
ctggacaaaatgaagcagataaacgagcagatggagtcagagaaggtgaaactgcaccga
gatcatgatgatttgcagaatcttctgcagaaaaagagctctgatgtagaatctctagag
aagtccaacgtcagcttaactgaacaaaaccagaaattaaagctcaacttggatcacatg
aaggaggaatatgcacaaaatgctgatacctttgaaaaggagaagatttccctgaacagc
acgatagaggagctcaagaagacaaacagcgatctgctccagaaagttgaacatctctca
gatcagaacagatcactctctgacgccaaaaacaccttggaagctcaacaacaagcacta
gaaatggataagaatgaattctctgttgttacggaaaatctttctaaaaaagtcgaggaa
ctgatgaataaggtctccgaatccgaaaaagaaagagccagccttttggaggacaagtcc
aagcttgatggtgatcttgtggccatcaggacagaaaaagagaagacagaaagggaacaa
gaattgcttagcaacaaagtagagcagttatggaactctttaaatgacacgtgtttggag
aagataacaaatttgcaaaaccttaatcagacttcggtttccagttgtcaaaaagttgaa
gagatattcggtgcacttcagaaggtcagtgaagagaaaacctctcttgccaaagaaatt
gagcttataaagacccagcagaagaggagtgatgaagaccgatcagatatggctgttgcg
aaggaggttctcgcttccaaattggcagaactggagaagaccaccgcgtgccttgttaag
gagaagactgacatcctggaatcacatgcatctctggaaagggaagtcttgtctcttcgt
caaagtgtggaaactggtgaaaagaagtgctccgaatatctaattaaaattgaagaactg
aaaaaatcacagctcgagttggaagcaaagttacaaaaccttcataatgacaacgttaag
ctggaggagcaacagcaagttgcagaaaagcaggtgacgcttttatccaaagccaaggac
gagatagtctccagcctgactgcagtgcaagctgagagggatgctctgcaggcggaaaag
gaggaggccaacgttatggtgactcagcttgaggcccaaaacaaaagtgctctagcaaag
cagcttgaggctgcagcgagtgccgggcacacagcacaggccctggacaaactgacgcag
gaaaagctcgctttgcaaaaggaaaaactagaggcggaggctctgatccaggagtttaaa
aatgccaaagaaggcacgcagaatcagctggacaatctgtcgaaacagaactctgaatac
caacaggagctgagtaaagccaaagaacagctgggctcggagaagaagaggatcagcagt
ctctataaagaaattgaggagctgaaaaaagcagcgtgtgaaaacaccctggctgtggaa
gctgtgaagcaggaaaaggccaaactggctgaagatctgtccagcagccagaaggaaaac
gacagccagcgaaaacttaaggagcagttgacacgtctcagaagtcagatgaaggacatg
gaaaagagggagctcgccctgaagaacgaatcagacacggagaaatcttctttacagcaa
tctatccagaaaaacagtgccttgatcttggaaaagaataaagagttggaaacgctgagg
aatgaggtatcggtgctgcgtagtgagatttctgcagcaagcactctccagagaactgtg
aaatctctggaaagcgataaagctcagctgcaagagcgaatgcgcgctctggagaagagc
ttaacggccgctcagacgtctagtcccgcagctcaggcttctagtcctgcggacaccccc
acagggtcgtctgctctggacaagatgagagaggcgaaggaaacggccgagtgtcaggtt
gaattcctgaactcagtcatcgtggagctgcagcgcaagaacgaggacctgaaatcaaag
ctggagaagatggccgaggcagcgcttaacggaaacacggccagcgagatggacaaccac
gaaagcttgtcagagcctcaagccaaaaagaaactgccaccgcgcctcttctgcgatatt
tgcgactgttttgacctccacgatacagaggactgtcccacgcaggagcagctgcctgat
tcgcctcctcacacaacctaccatggcagtgccagcgaagagaggccatactgcgatatc
tgtgaggtgttcggccactggacagagtcgtgcaacgacgaccagacattctaa
DBGET
integrated database retrieval system
