Ictalurus punctatus (channel catfish): 108255839
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Entry
108255839 CDS
T04658
Symbol
zgc:65851
Name
(RefSeq) low molecular weight neuronal intermediate filament
KO
K04572
neurofilament light polypeptide
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108255839 (zgc:65851)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108255839 (zgc:65851)
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108255839 (zgc:65851)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
108255839 (zgc:65851)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
BCDHK_Adom3
Motif
Other DBs
NCBI-GeneID:
108255839
NCBI-ProteinID:
XP_017307609
Ensembl:
ENSIPUG00000017157
UniProt:
A0A2D0PNL4
LinkDB
All DBs
Position
22:19271563..19280840
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AA seq
564 aa
AA seq
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MSFHSDVYSTSSYRKFFGDSSRVSAPPLRSSSGYRVYGGGYRGRVHAGLSSSAPDAADLA
HTAASATELKIVRTNEKEQLQGLNDRFAAFIERVRELEQHNRALEAEAESLRRSLGSEPA
RLRDLYEHELRELRERADQLERDRSRAQLENAHLGEALARAQEKLHEESRLRDEAERELQ
RCRKEAEDGALHQIELQKRVESLLHEIDFARKVHDEEVRELQASLQASQISVEMDVSKPD
LTVALKDIRAQYEVLSSRNQQQAEDWYRSKFASVTQATSRDTDAIKHTRDELSACRRQVQ
ARTLEIDALRNHNDALERQLAEMEDRHSTELGEMQETIAQLEDALRSTKGEMSHHLREYQ
DLLNVKMALDIEIAAYRKLLEGEETRLGSVGVTTVHPAYSAVSYSVGRAYTLGAYRRDVA
KPESEEEEDEKEAEEKEEEEVEEEEEEEGGEEEEEEEAAEEEGGDEEEEEEEKGGEDEEE
EGGDEREEGAEGDQVEEEEVVEVEKKEKKEQEEEKKEMKEQVEEKKKDKVMEKEKEKKSE
DKGDEAKAESKAEKTESSKGDKSK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagtttccatagcgacgtttactccacgagctcctaccggaagttcttcggggactcc
tctcgggtgtccgctcccccgctccggtcctcgtcgggttaccgggtttacggaggcggt
taccggggccgcgtgcacgccggtttgtcctcctcggcgccggacgcggcggatctcgcg
cacacggcggcgtcggccaccgagctgaagatcgtgcgcaccaacgagaaggagcagctg
cagggtctcaacgaccgcttcgctgccttcatcgagcgcgtgcgcgagctcgagcagcac
aaccgcgcgctcgaggccgaggccgagtcgctgcgccgcagcctgggctccgagcccgcg
cgcctgcgcgacctctacgagcacgagctgcgcgagctacgcgagcgcgccgaccagctg
gagcgcgaccggagccgcgcgcagctcgagaacgcgcacctcggcgaggcgctcgcgcgc
gcccaggagaagctgcacgaggagagccgcctgcgcgacgaggccgagagagagctgcag
cgctgccgcaaggaggcggaggacggagcgctgcaccagatcgagctccagaagagggtg
gagtcgctgctgcacgagatcgacttcgcgcggaaagtgcacgatgaagaagtgcgcgag
ctgcaggcttcactgcaagcctctcagatatctgtggagatggacgtgagtaaaccggat
ctcaccgtggctctgaaggacatccgggcgcagtacgaggttctgtcctcgcggaaccag
cagcaggcggaggactggtaccgctccaagttcgccagcgtgacccaggcgacatcacgc
gacaccgacgccatcaaacacaccagggatgagctgagcgcatgccgacgccaggttcag
gcgcgtacgctggagatcgacgccctacgcaatcacaacgacgcactcgagcggcagctg
gccgagatggaggaccgccacagcaccgagctcggagagatgcaggagacgatcgctcag
ctagaagacgctctgcgcagcactaaaggagaaatgtctcatcacctgcgcgagtatcag
gacctgctgaacgtcaagatggcgttggacatcgagatcgccgcctacaggaagttgctg
gaaggcgaagagacccgtctgggcagtgtgggcgtgaccacagtccatcccgcctactct
gctgtttcctattcggtgggacgcgcttacaccctgggtgcctacaggagggacgtggcc
aaacctgagagtgaggaggaagaggacgagaaggaagcggaggagaaggaagaggaggaa
gtagaagaagaagaagaagaagaaggaggagaagaagaagaagaagaagaagcagctgag
gaggaaggaggagatgaagaggaggaggaggaggagaagggaggagaggatgaagaagaa
gaaggtggagatgaaagagaagaaggagcggaaggagaccaggttgaggaagaggaggtg
gtggaggtagagaagaaagagaagaaggagcaggaagaagagaagaaggagatgaaggag
caggtagaagagaagaagaaggacaaggtgatggagaaagagaaagagaagaagagcgaa
gacaaaggggatgaggctaaggccgagagcaaggcagagaaaaccgaaagcagtaaagga
gacaagagcaagtaa
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