Ictalurus punctatus (channel catfish): 108255844
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Entry
108255844 CDS
T04658
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108255844 (cacna1ba)
04020 Calcium signaling pathway
108255844 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108255844 (cacna1ba)
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108255844 (cacna1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
108255844
NCBI-ProteinID:
XP_017307620
Ensembl:
ENSIPUG00000005281
UniProt:
A0A2D0PRB5
LinkDB
All DBs
Position
22:complement(15566909..15704741)
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AA seq
2276 aa
AA seq
DB search
MARFEDDLPVRYGGGSPSGAGRGPSRQQGPPGAPRVYKQTMAQRARTMAIYNPIPVKQNC
LTVNRSLFIFSEDNVIRKYAKRVTEWPPFEYMILATIIANCIVLALEQHLPADDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFAFHKDSYLRNGWNVMDFVVVLTGILTTVGADFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMGK
FHRACFRNDTNEQVAEFPCGLDPPARLCENGTTCREYWPGPNFGITNFDNILFAVLTVFQ
CITMEGWVEILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
QEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKSPLDGAWYKRKCNNPVLKR
SKKSKNDLINAEEGDDHFTDISSVAPQGSPFARASVKSSKNESSSYLRRKEKRVRFFIRR
MVKSQGFYWTVLCLVGLNTLCVAIVHYDQPEWLTYALYLAEFVFLGLFLIEMSLKMYGLG
PRSYFHSSFNCFDFGVIVGSIFEVIWAAVKPGASFGISVLRALRLLRIFKVTKYWNSLRN
LVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVF
QILTGEDWNAVMYHGIESQGGVGSGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQE
LTKDEEEQEEAISKKLALQKAKEVKEVSPMSAASISLAANYVCSPAHHYLSQEQRRSLKM
MSVWEQRTTQIRKHMRASSEALYHEELNPRLTSTQHLRPDITTHLDRPLVVEPRCDWDKP
RDLRVEAGTPEDPNPQVPSDPLAMEPPQSQPPRKHHHRRRERTSNEAQENGETGASRHHI
HHSRIKETEGTRAKDGKSERSHSRDARGEHRHHRSHRAGREGNGVVCAKSERRSHHREGS
RSAKGDGERSSRGEEGGNGGRRRHRQRAGKAQSALEDGEQREDGEREEDKPPEHTQTEMG
GDMLPASSQQLAVGSRWCLEKPEDSDNQRNVSRTGGLGVHIPVTITSPPGETTLIAMNSI
DSETVPMTEKNLEEGNQSGPRPILPYSSMFIFSPTNPVRRLCHYIVSLRYFEMCILMVIA
MSSIALAAEDPVNANALRNYVLKYLDYVFTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNI
LDFIVVSGALVAFAFTGTKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKN
VLNILIVYILFMFIFAVIAVQLFKGKFFYCTDESKGLERDCRGQFLEYDKHEVSAQPREW
RKYDFHYDNVLWAFLTLFTVSTGEGWPTVLKHSVDATFEDQGPSPGYRIEMSIFYVVYFV
VFPFFFVNIFVALIIITFQEQGDKALSECSLEKNERACIDFAINAKPLTRYMPQNQQSFQ
YRMWKFVVSPPFEYSIMIMIALNTVVLMMKYYDAPNAYEAMLKYLNVVFTALFSLECVLK
IIAFGPLNYLKDAWNVFDFVTVLGSITDILVTEINDRLLNLSFLRLFRAARLIKLLRQGY
TIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIDLNEDTAINHHNNFRTFLQ
ALMLLFRSATGEAWHEIMLSCLSHRPCDVNSGTPGNECGSDFAYFYFVSFIFLCSFLMLN
LFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIKYRDMYEMLLHMCPPLG
LGKKCPPRIAYKRLVKMNMPIADDNTVHFTSTLMALIRTALEIKLASGIVAQRLCDAELK
KELGTVWPNLSQKTMDLLVTPHKPNELTVGKVYAALMIFDYYKQNRAKKIQMQQQQSKEQ
PGPQNNVGALLEPILNPMQGKSRSMMDCPSDIQPPIRPSSATLNNGHTPHDNTIKGSSSW
ASEKTKEVQRSKKRPILRGQSEEISNTNTAQVSVEMRKMENSSNTVAPAGLEGQGRAVSM
PKLSAEIQRSHSRHSPGTLLAPIPDSPLRRSVSTFAPQRPPEVITNDYVLEKPAQERPHH
HHHHHRCHHRRDREKKQRSLDRSPGGQPNSTGGTAADSAGNSSFRERGHDRGRSHERKHH
SSTAEKQRYYSCDRYGSREHFPAKPAPASCATSPGEAQETTFTKQGSGWAKGSQVLLSSG
SSTPSHGRRQLPQTPLTPRPAVAYRTANSSPVSSAGAQNTLPPPSPVIRISSEPYLRPQT
TLLSPQQIVTLPPLSQHSLLGMPNGYHYITGVTAGPGGSSDNIQRYYPEAEGEEWC
NT seq
6831 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtttcgaagacgacctgccggtccggtatggaggcggctctccgtcgggtgcg
ggccgagggccgagccggcagcaggggcccccgggcgcccccagggtctacaaacagacc
atggcccagcgagcccgcactatggccatctacaaccccattcctgtcaagcagaactgc
ctcaccgtcaaccgctctctcttcatcttcagcgaggataacgtgattcggaagtacgcc
aagagggtcaccgagtggcctccatttgagtacatgatcctcgccaccatcatagccaac
tgcattgtcttggccttggagcagcatttacctgcggatgataaaaccccgatgtccgag
cgactggatgacacagagccttactttattggcatattttgctttgaggctgggattaag
atcattgcacttggctttgcgtttcataaagactcctacctccgtaacggatggaatgta
atggatttcgtcgttgtgctgacggggattctgactaccgtcggggcagacttcgacttg
cggacgctcagggcagttcgagtcctacggccgcttaagctggtgtctggaattccaagt
cttcaggtggtcctgaagtccatcatgaaagccatggtacctttgctgcagattggcctg
ctgctcttctttgccatcctcatgtttgccatcattggcttggacttctacatgggcaag
ttccaccgtgcctgcttcagaaacgacactaacgagcaggtggccgagttcccctgtggc
ctggatcctccagcacgcctctgtgagaacggcaccacttgtcgggagtactggcctggc
cccaactttggcatcaccaactttgacaacatcctcttcgccgtgctcaccgtcttccag
tgcatcaccatggagggctgggtggaaatcctttacaatgccaacgatgcctcagggaac
acctggaactggctgtacttcatccccctcatcatcatcggctccttcttcatgctcaac
ctggttctgggagttctgtcaggggagtttgctaaggagcgggagcgtgtggaaaagagg
caggagttcctaaagctgcgcagacagcagcagattgaaagagagctcaccggctacctg
gagtggatctgcaaagcagaagaagtcatgcttgctgaggaggacaagaacgcagaggag
aagtctcctctggatggtgcctggtacaaaaggaagtgcaacaacccagttctgaaaaga
tccaagaagagcaagaatgacctcatcaatgcagaagaaggggacgatcatttcacggat
atctcatcagtcgcaccccagggctcaccgttcgctcgggctagcgtgaagagcagcaag
aacgagagctcttcgtatttgcgcaggaaagaaaagcgagtgcgcttcttcatccggcgc
atggtgaagtctcagggcttctactggactgtgctgtgtctggtgggcctgaacacgctg
tgtgtggctatagtgcactacgaccagcccgaatggctcacctacgctctctatctggcc
gagtttgtattcttgggcctgttcttgattgagatgagtctgaagatgtacggcctcggc
ccccggagctacttccactcttccttcaactgtttcgactttggcgtgatcgtagggagt
attttcgaggtgatatgggcagcagttaaacccggggcatctttcggcatcagcgtgtta
cgagctctgcggctgctgaggatcttcaaggttacaaagtattggaattctttgaggaac
ctggtggtgtctctgctcaactctatgaagtctatcatcagcctgttgttcctcctgttt
ctcttcattgtggtgttcgcgctgctcggaatgcagctttttgggggacagtttaatttt
gaagatgagaccccgacaacgaacttcgacactttcccagcagcaattctgacggtgttc
cagattctgacaggagaagactggaatgcagtgatgtatcatgggatcgagtctcaggga
ggagtgggcagtggcatgttctcctccgtctacttcatcgtcctcacgctgtttggaaac
tacactcttcttaacgtcttcctggctattgctgtcgacaaccttgcaaacgcacaggaa
ctcactaaggatgaggaggaacaggaggaggccatcagtaagaagctggccctccagaag
gctaaagaggtgaaggaagtcagccccatgtcagctgctagcatctctctcgcagcgaat
tatgtctgctcccccgcccatcactacttgagtcaagagcagcggcgctcgctgaagatg
atgtccgtatgggagcagcgcaccacgcagatccgtaagcacatgcgagccagcagtgag
gccctgtaccacgaggaactcaaccctcgcttgacctccactcagcacctacggcccgac
atcaccacccacctggaccggccactggtggtggagccacgatgcgactgggacaagccc
agggatttgagagtcgaagcaggcacacctgaggaccccaacccacaggtaccctctgat
ccccttgccatggagcctcctcaatcccaacccccacgtaaacaccatcatcggagacgc
gagcgaacttccaatgaagcccaagaaaatggtgaaactggagcctcacgtcaccacata
caccacagccgcatcaaggagactgagggcacacgggccaaagatggcaagagtgagcgc
agccacagccgtgatgctagaggagaacacagacaccaccgttcgcatagggcaggacgc
gaaggcaatggtgttgtctgtgccaagagcgagagacgctcgcaccacagagaaggctca
cgctcggccaagggggatggagagaggagctcacgaggggaggaagggggcaatgggggc
aggaggaggcaccggcaacgggccggcaaggcgcagtctgcactagaggacggggagcag
agggaggatggagagcgagaagaggacaagcctccagagcacacacaaaccgaaatgggt
ggagatatgctgcctgcaagttctcagcagcttgcggtgggaagtcggtggtgtctggag
aaaccagaagactcagataaccagcggaatgtcagccgcacaggaggcctgggggtccac
atccccgtcaccatcacctctccacctggagagaccactctcatagccatgaacagtata
gacagcgagacagtgcccatgactgagaagaacctggaggaggggaaccagagtggtcca
cgccctatccttccttatagctccatgtttatcttcagcccaactaacccggtgaggcgt
ttgtgtcactacatagtcagcctgcgttactttgagatgtgtatcctgatggttatagct
atgagcagcattgcactggctgcagaagacccggttaatgccaacgctctgcggaactac
gtgctcaagtatttggactacgtcttcaccggtgtgttcacatttgagatggtaattaag
atggtggatttgggcttgctactgcatccaggctcctacttcagagacttgtggaatatt
ctagacttcattgtggtcagtggagctctggtggcattcgctttcacagggaccaaaggg
aaagacatcagcaccatcaagtctctcagggtgctacgagtcctgcgtcctctgaagacc
attaaacgcttaccaaaactgaaggccgtgttcgactgtgtggtgaactccctgaagaac
gtgctgaatatcctcatcgtctacatcctcttcatgttcatcttcgctgtcattgccgtg
cagcttttcaagggcaagttcttctactgcacggacgagtccaaaggcctggagagggac
tgcagagggcagtttctggagtacgataagcatgaggtctcggcccagcccagggagtgg
agaaaatacgactttcactatgataacgtgctgtgggcctttcttacactcttcactgtg
tccacaggagagggctggcctacggttctgaagcactctgtggacgccaccttcgaggac
cagggtcctagtcccggctaccgcatcgagatgtccatcttctacgtggtctactttgtt
gtcttccccttctttttcgtcaacatctttgtggcgttgattattatcacgttccaggag
cagggcgacaaagccttgtccgagtgtagtctggagaaaaatgagagagcctgtattgac
tttgccatcaatgccaaaccgctgacacgctacatgccccagaaccagcagtctttccag
taccggatgtggaagtttgtcgtttctccacctttcgagtactccatcatgatcatgatc
gccctcaacactgtggtcctcatgatgaagtactacgatgctccaaacgcctatgaagca
atgctgaagtatctcaacgtcgtctttactgcccttttttcactggagtgtgttctgaag
attattgcatttggccctttgaactatctgaaggatgcgtggaacgtgttcgactttgtg
acagtactggggagcatcacggatatcctggtcactgagattaacgaccgtctgttaaac
ctgagcttcctgaggctgttccgagcggcccgtctcatcaaactcctccggcagggttac
accatccgcatcctgctttggacatttgtgcagtccttcaaggctctgccttatgtctgc
cttctgatcgctatgctgttcttcatttacgccattataggaatgcaggtctttggaaac
atcgatttgaacgaggacacggccatcaaccaccacaacaacttccgcactttcctgcaa
gctctcatgctgctcttcaggagtgctacaggagaggcctggcacgagatcatgctgtcg
tgtctgagtcaccgtccatgcgatgtgaactccgggacgccgggaaacgagtgcggcagc
gactttgcctacttttactttgtctccttcatcttcctttgttctttcctgatgctgaat
ctgtttgtggctgtgattatggataattttgagtacctgacccgggactcctccatcctg
ggtccccaccacctggacgagttcatccgcgtatgggccgagtacgacccagctgcttgt
ggccgtatcaagtaccgcgatatgtatgagatgctgctccacatgtgcccacctttaggt
ttgggaaagaaatgtccgccacgaatcgcctacaagcgtctggtgaagatgaacatgccc
atcgccgacgacaacacggtccatttcacctccacgctcatggctctaatccgcaccgca
ctggagatcaaactggcctcaggaatcgtggcccagcgtctgtgtgatgcagagctaaag
aaggagctgggaaccgtctggccaaacctgtctcagaagaccatggatctcctggtgact
cctcacaaacctaacgagctgacggttgggaaggtgtacgctgctctcatgatcttcgac
tactacaaacagaacagagccaagaaaattcagatgcagcagcagcagtccaaagagcag
ccaggaccacagaacaatgtgggagctctcctggagcccattctgaaccctatgcagggg
aaaagcaggagcatgatggactgtccatcagatatccagcctcccatcagacccagctct
gccacgctgaacaacgggcacacaccccatgacaacaccattaaagggtcctcgtcatgg
gcttcagagaaaaccaaagaggtccagaggtcaaagaagcgacccatcctgagaggccag
tcagaagagatctcaaacacaaacaccgcccaggtgtcagtagagatgaggaaaatggag
aacagttccaacacggtagctcctgctggtttagagggtcaaggacgagcggtatccatg
cccaaactcagtgcagaaatccagagaagtcattcacgtcactctccaggaaccttactt
gcaccgattcctgactcccccctgaggcgttcggtgtcgacgtttgcgccacagcgtcct
ccggaggtcatcacgaacgactatgttctggagaagcctgcacaagagcgaccgcatcac
catcatcatcatcaccgctgccatcaccggagagacagagagaagaagcagaggtcgctg
gataggtcacccgggggacagcctaatagcacgggtggcacggcggctgactctgcgggg
aactcctcgttccgggagagagggcacgaccgaggccgttcccacgaaaggaaacaccat
tcgtcgacggcggagaagcaacgttactactcgtgcgatcgctacggcagccgcgagcac
tttcccgctaagcctgcgccagccagctgtgccacctcacccggagaggctcaggagacc
accttcaccaagcagggtagtggttgggctaaagggagccaggtgttgttgagttcaggc
tcgagcacgcccagccacgggcgcaggcagctgccccagacgcccctgacccctcgccca
gcggtggcctacaggactgcaaactcctcccccgtgtcctctgcgggcgcccagaacacc
cttcctcccccgagtcccgtaatacgcatcagctccgagccgtacctccggccccagacc
acgctgctgagcccacagcagatcgtgaccctcccgccgctgtcccagcattccctgctt
gggatgcccaacgggtaccactacatcacgggcgtgaccgcggggcctggcggcagcagc
gacaacatccagcgctactaccccgaagcagagggggaagaatggtgctag
DBGET
integrated database retrieval system
