KEGG   Ictalurus punctatus (channel catfish): 108255859
Entry
108255859         CDS       T04658                                 
Symbol
sema4c
Name
(RefSeq) semaphorin-4C
  KO
K06521  semaphorin 4
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:ipu04090]
    108255859 (sema4c)
CD molecules [BR:ipu04090]
 Proteins
  108255859 (sema4c)
SSDB
Motif
Pfam: Sema PSI Ig_SEMA-3_4_7A Ig_2 Ig_3 Paramecium_SA
Other DBs
NCBI-GeneID: 108255859
NCBI-ProteinID: XP_053530302
Ensembl: ENSIPUG00000017679
UniProt: A0A9F7R864
LinkDB
Position
22:18789331..18871774
AA seq 867 aa
MGGAKVLLVVLVIGLENVNCVNWNPVPRKTIRYHEVIDSMARFRAVGVFNYTMLTLSEHE
RVLYVGARETLFALDPNDITRQLRPQIDWPAPAEKKKECTERGKTNQTECFNYIRFLQGY
NHTHMYTCGTYAFQPKCTYINMEHFTLNGAALEDGKGKCPYDPAKGHTGLIVDKELYSAT
LNNFLGTEPVILRNLGQQHYSMKSEYLPAWLNEPNFVGSALVRESRNSREGDDDKIYFFF
SERAVELDCDGDMTVARVARVCKGDQGGTRTLQKKWTTFQKARLVCSIPERHITFNHLQA
VFTMQGADWRNTVFYGVFHAQWGDVDVSAVCQYHIADVKSVFEGSYMEYREASQRWGRFM
GVVPNPRPGACITNFDRENGYNSSLQLPDATLNFAKKHPLMEPKAEAQPLMLTKGVNFTR
IAVDRVNALDQRAYSVLFIGTADGWLQRVAIVGSEAHVIEEIRLFEWPQPVDSLTISHSK
KYLYIGSRSEVLQLPLANCSRYHSQPDCWLSRDPYCAWDSEGRACVRIDLHRGSMSTLTQ
DLTLERFNRGSKAKFDKPVSIPSPEHSRLRNVTVVVGSDLVLPCQLVSNLARPSWALNER
ELLLSSDSDTSGPRFDRALRALVIPRAGTHQGGRYVCYSEEQGVKFQTERYQVVVVTSAP
VFMEAREPDASMGLFWVLVIALGVTCLVLLIGALYLRRRLKLALGKAGTAEMKPLESTLV
YPITLPKETPSFVPSKMPTSSNNDEDRFWETGANFYYSDGSLKIVPGHASSSSPSAIPGQ
PLHSPSRLSLTNIRNSGTNGYVRLSLSVAGEDRPNGGMSAGGVGGVGGKLGIGARENDYT
SPFKEELRRTLQQRSVLPDANPEESSV
NT seq 2604 nt   +upstreamnt  +downstreamnt
atgggtggggctaaagtcctactcgtggttctggtgataggtctggaaaatgtgaactgt
gtgaactggaacccagtcccgcgcaagaccatccgatatcacgaagtgatagacagcatg
gcacgcttccgggcggtgggtgtgtttaactacaccatgttgactctgtccgagcacgag
cgcgtcctgtacgtcggcgccagagagacgctattcgccctcgaccctaatgacatcaca
cgacaactccgcccacagattgactggccggcccctgcggagaagaagaaagagtgtaca
gagagaggaaaaaccaaccagacggagtgttttaactacatccggttcctgcagggctac
aatcacacacacatgtacacgtgtggcacctacgccttccagcccaagtgcacctacatc
aatatggaacatttcactctgaacggtgccgccctggaggacgggaagggcaagtgtccc
tacgaccccgctaaaggccacaccggcctcatcgtggataaggagctgtactctgccact
ctgaataatttcttgggcacggagccggtgatcctgcgcaacctgggacagcagcactac
agcatgaagagcgaatacctgccggcctggcttaacgagccgaacttcgtgggttctgct
ctggtgcgtgagagcaggaacagccgcgagggagacgacgataaaatctatttcttcttc
agcgagagagccgtggagctcgactgtgacggagacatgactgtagcccgggtggcccgt
gtgtgtaagggtgaccaggggggaactcggacgctgcagaagaagtggacgacgtttcag
aaggctcgtttggtttgttccatccccgagcgccacatcaccttcaaccacctgcaggcc
gtgttcaccatgcagggagctgattggaggaacaccgtcttctacggggttttccacgcg
cagtggggggacgtggacgtctcggccgtgtgtcagtaccacatcgcagatgtgaagagc
gtgttcgagggctcgtatatggagtaccgcgaggcgtctcagagatgggggagattcatg
ggcgtcgtgccgaacccacggcccggagcgtgtatcactaacttcgacagagagaacggc
tataacagctcgctgcagctgccggacgccacgctgaacttcgctaagaaacacccgctg
atggagccgaaggccgaagctcaacccctgatgctcaccaagggcgtgaacttcacccga
atcgcagtggaccgagtgaacgccctcgaccagagagcgtacagtgtgctgtttattgga
acagctgatggatggctccagcgagtggcgattgtcggatctgaggctcatgtgatcgag
gaaatccggctgtttgaatggccgcaaccagtcgacagtctgaccatctcgcacagcaag
aagtacttgtatatcggctctcggtcggaggtgttacagttgcccttggctaactgcagt
cgttatcactctcagccggactgctggctgtcccgagatccgtactgcgcctgggacagc
gagggacgagcctgcgtccgcatcgacctccaccgcgggtccatgtcgactctcactcag
gatctcacgctggagaggttcaatcgagggtcaaaggcgaagtttgataagccggtgtcc
atcccgagtccggaacattcccggctgaggaatgtgaccgtggtggtgggttcggacctc
gtcctgccgtgccagctggtctcgaacctggcgcgtccgtcgtgggcgctgaacgagcgc
gagttgttgctctcgtctgactcggatacttcgggtccccgtttcgaccgcgcccttcgt
gccctggtcatcccccgggcggggacccaccagggcggacgctacgtgtgctactccgaa
gagcagggagtgaagttccagacggagcgctaccaggtggtggtggtgaccagcgcgccg
gtgtttatggaagcacgagagccggatgccagcatggggcttttctgggtgctcgtgatc
gcgttaggcgtcacttgtctggtgctgctcatcggcgccctctacctgcggcggaggctg
aaattagcgctggggaaagcgggaactgccgagatgaagccgttagagagtacgctggtc
tacccgatcacgctgcccaaggagacgccgagcttcgtgcctagcaagatgcccaccagc
tcaaacaacgacgaggatcgcttctgggaaaccggagccaatttttactactcggacgga
tcgttgaagatcgtgcctggacacgcgtcctcgtcttcgccgagcgccattcccgggcag
ccgctgcactcgccgagccgcctgagcctcacgaacatccggaactccggcaccaacggg
tacgttcgactcagcctgagcgtggcgggcgaggaccggccgaacggagggatgagcgcg
ggaggagtgggaggagttggaggaaagctggggatcggcgccagggagaacgactacacc
agcccttttaaggaggagctacggaggacactgcagcagagaagcgtcctgcctgacgca
aacccggaagagtcgtcagtgtag

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