Ictalurus punctatus (channel catfish): 108255859
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Entry
108255859 CDS
T04658
Symbol
sema4c
Name
(RefSeq) semaphorin-4C
KO
K06521
semaphorin 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ipu04090
]
108255859 (sema4c)
CD molecules [BR:
ipu04090
]
Proteins
108255859 (sema4c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
Ig_SEMA-3_4_7A
Ig_2
Ig_3
Paramecium_SA
Motif
Other DBs
NCBI-GeneID:
108255859
NCBI-ProteinID:
XP_053530302
Ensembl:
ENSIPUG00000017679
UniProt:
A0A9F7R864
LinkDB
All DBs
Position
22:18789331..18871774
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AA seq
867 aa
AA seq
DB search
MGGAKVLLVVLVIGLENVNCVNWNPVPRKTIRYHEVIDSMARFRAVGVFNYTMLTLSEHE
RVLYVGARETLFALDPNDITRQLRPQIDWPAPAEKKKECTERGKTNQTECFNYIRFLQGY
NHTHMYTCGTYAFQPKCTYINMEHFTLNGAALEDGKGKCPYDPAKGHTGLIVDKELYSAT
LNNFLGTEPVILRNLGQQHYSMKSEYLPAWLNEPNFVGSALVRESRNSREGDDDKIYFFF
SERAVELDCDGDMTVARVARVCKGDQGGTRTLQKKWTTFQKARLVCSIPERHITFNHLQA
VFTMQGADWRNTVFYGVFHAQWGDVDVSAVCQYHIADVKSVFEGSYMEYREASQRWGRFM
GVVPNPRPGACITNFDRENGYNSSLQLPDATLNFAKKHPLMEPKAEAQPLMLTKGVNFTR
IAVDRVNALDQRAYSVLFIGTADGWLQRVAIVGSEAHVIEEIRLFEWPQPVDSLTISHSK
KYLYIGSRSEVLQLPLANCSRYHSQPDCWLSRDPYCAWDSEGRACVRIDLHRGSMSTLTQ
DLTLERFNRGSKAKFDKPVSIPSPEHSRLRNVTVVVGSDLVLPCQLVSNLARPSWALNER
ELLLSSDSDTSGPRFDRALRALVIPRAGTHQGGRYVCYSEEQGVKFQTERYQVVVVTSAP
VFMEAREPDASMGLFWVLVIALGVTCLVLLIGALYLRRRLKLALGKAGTAEMKPLESTLV
YPITLPKETPSFVPSKMPTSSNNDEDRFWETGANFYYSDGSLKIVPGHASSSSPSAIPGQ
PLHSPSRLSLTNIRNSGTNGYVRLSLSVAGEDRPNGGMSAGGVGGVGGKLGIGARENDYT
SPFKEELRRTLQQRSVLPDANPEESSV
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgggtggggctaaagtcctactcgtggttctggtgataggtctggaaaatgtgaactgt
gtgaactggaacccagtcccgcgcaagaccatccgatatcacgaagtgatagacagcatg
gcacgcttccgggcggtgggtgtgtttaactacaccatgttgactctgtccgagcacgag
cgcgtcctgtacgtcggcgccagagagacgctattcgccctcgaccctaatgacatcaca
cgacaactccgcccacagattgactggccggcccctgcggagaagaagaaagagtgtaca
gagagaggaaaaaccaaccagacggagtgttttaactacatccggttcctgcagggctac
aatcacacacacatgtacacgtgtggcacctacgccttccagcccaagtgcacctacatc
aatatggaacatttcactctgaacggtgccgccctggaggacgggaagggcaagtgtccc
tacgaccccgctaaaggccacaccggcctcatcgtggataaggagctgtactctgccact
ctgaataatttcttgggcacggagccggtgatcctgcgcaacctgggacagcagcactac
agcatgaagagcgaatacctgccggcctggcttaacgagccgaacttcgtgggttctgct
ctggtgcgtgagagcaggaacagccgcgagggagacgacgataaaatctatttcttcttc
agcgagagagccgtggagctcgactgtgacggagacatgactgtagcccgggtggcccgt
gtgtgtaagggtgaccaggggggaactcggacgctgcagaagaagtggacgacgtttcag
aaggctcgtttggtttgttccatccccgagcgccacatcaccttcaaccacctgcaggcc
gtgttcaccatgcagggagctgattggaggaacaccgtcttctacggggttttccacgcg
cagtggggggacgtggacgtctcggccgtgtgtcagtaccacatcgcagatgtgaagagc
gtgttcgagggctcgtatatggagtaccgcgaggcgtctcagagatgggggagattcatg
ggcgtcgtgccgaacccacggcccggagcgtgtatcactaacttcgacagagagaacggc
tataacagctcgctgcagctgccggacgccacgctgaacttcgctaagaaacacccgctg
atggagccgaaggccgaagctcaacccctgatgctcaccaagggcgtgaacttcacccga
atcgcagtggaccgagtgaacgccctcgaccagagagcgtacagtgtgctgtttattgga
acagctgatggatggctccagcgagtggcgattgtcggatctgaggctcatgtgatcgag
gaaatccggctgtttgaatggccgcaaccagtcgacagtctgaccatctcgcacagcaag
aagtacttgtatatcggctctcggtcggaggtgttacagttgcccttggctaactgcagt
cgttatcactctcagccggactgctggctgtcccgagatccgtactgcgcctgggacagc
gagggacgagcctgcgtccgcatcgacctccaccgcgggtccatgtcgactctcactcag
gatctcacgctggagaggttcaatcgagggtcaaaggcgaagtttgataagccggtgtcc
atcccgagtccggaacattcccggctgaggaatgtgaccgtggtggtgggttcggacctc
gtcctgccgtgccagctggtctcgaacctggcgcgtccgtcgtgggcgctgaacgagcgc
gagttgttgctctcgtctgactcggatacttcgggtccccgtttcgaccgcgcccttcgt
gccctggtcatcccccgggcggggacccaccagggcggacgctacgtgtgctactccgaa
gagcagggagtgaagttccagacggagcgctaccaggtggtggtggtgaccagcgcgccg
gtgtttatggaagcacgagagccggatgccagcatggggcttttctgggtgctcgtgatc
gcgttaggcgtcacttgtctggtgctgctcatcggcgccctctacctgcggcggaggctg
aaattagcgctggggaaagcgggaactgccgagatgaagccgttagagagtacgctggtc
tacccgatcacgctgcccaaggagacgccgagcttcgtgcctagcaagatgcccaccagc
tcaaacaacgacgaggatcgcttctgggaaaccggagccaatttttactactcggacgga
tcgttgaagatcgtgcctggacacgcgtcctcgtcttcgccgagcgccattcccgggcag
ccgctgcactcgccgagccgcctgagcctcacgaacatccggaactccggcaccaacggg
tacgttcgactcagcctgagcgtggcgggcgaggaccggccgaacggagggatgagcgcg
ggaggagtgggaggagttggaggaaagctggggatcggcgccagggagaacgactacacc
agcccttttaaggaggagctacggaggacactgcagcagagaagcgtcctgcctgacgca
aacccggaagagtcgtcagtgtag
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