Ictalurus punctatus (channel catfish): 108255865
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Entry
108255865 CDS
T04658
Symbol
mef2cb
Name
(RefSeq) myocyte enhancer factor 2cb isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108255865 (mef2cb)
04371 Apelin signaling pathway
108255865 (mef2cb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108255865 (mef2cb)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
108255865 (mef2cb)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
108255865
NCBI-ProteinID:
XP_017307669
Ensembl:
ENSIPUG00000013747
UniProt:
A0A2D0PRG4
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Position
22:10484111..10552267
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AA seq
479 aa
AA seq
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MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESEDKYRKI
NEDIDLMISRQRLCAVPPSNYDMPVSIPVSNQIYSHPGGSLGNHNLVPLSHHGIQRNSMS
PGVTHRPPSAGGLMGADLTTGPGTSAGKDGIPTFYRNGYGNHRNSPGLLVSSGGMNKNMQ
AKSPPPMNLGMNSRKPDLRVLIPPGTKNNMPSINQRINNSQSAQSLATPVVSVATPTLPG
QGMGGYPSAISTSYGTEYSLSSADLSSISGFSSANTLHLGSMSGWQQQHLQNMQHSALGQ
LGNCTSSHLCQGSNLSLPSTQSLHIKSEPVSPPRDRSSSATPGGYAPPPSHPQQHQAQPP
QQAPPPQGRSPADSLSSEGSERDEHRPDFHSPLGMGRPVLDERDSPSVKRVRLSEGWAT
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaaaaagattcagatcacgcggattatggacgaacgcaacagacaggtgaca
ttcaccaagaggaagtttggactgatgaagaaagcctatgagctgagcgtgctatgtgac
tgtgagattgccctcatcatcttcaacagcaccaacaagctcttccaatacgccagcacc
gacatggacaaagtgttactgaagtacacagagtacaacgagcctcatgagagcaggacc
aattcagacatcgtggagacgttgagaaagaagggcctaaatgggtgcgacagccccgac
ccagacgcagacgattcagtcggtcacagccccgagtctgaggacaagtaccgcaaaatc
aacgaggacatagacctaatgatcagcagacagagactatgtgccgtacccccttctaac
tatgacatgccagtgtctatcccagtgagcaaccagatctacagccaccctggaggatcc
ctaggcaaccataacctggttccactatcccatcacggcatacagaggaacagcatgtcc
ccaggtgtcacacacagacctccaagtgcaggtggtcttatgggtgccgatctcaccaca
ggccctggcaccagtgctggtaaggatggcatccccaccttctacagaaacggctatgga
aaccaccgtaactctcctggattgctggtgtcctctgggggtatgaacaagaacatgcag
gccaagtcgcccccgccaatgaacctgggcatgaacagccgaaagcctgacctgcgcgtg
ctcatcccgccaggaaccaagaacaacatgccttcgatcaatcagagaataaacaactcg
cagtccgcacagtcactggccacccctgtggtttctgtggcaacacccactctaccaggc
cagggcatgggcggctacccatcagcgatctccacctcctatggtactgaatattctcta
agcagtgccgacctgtcatctatatctggctttagcagtgccaacaccctgcacctgggc
tcaatgagtggctggcagcagcagcacctccagaacatgcagcactctgccctcggccag
ctgggaaattgcactagctctcacttatgtcagggttcaaatctctccctgccctctacc
caaagcctgcacatcaagtccgaacctgtttctcctcctagagaccgctccagcagcgcc
acgcctggcggctatgccccgcccccttcccatccgcagcagcaccaggcccaacccccg
caacaggctccgcccccgcagggccgctcgccagccgacagcctgagcagcgagggcagt
gagcgcgatgagcaccggcccgacttccactcgccccttggcatgggccggcccgtcctg
gacgagcgcgacagtccgtctgtcaagcgagtccgcctttctgagggctgggccacatga
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