Ictalurus punctatus (channel catfish): 108255875
Help
Entry
108255875 CDS
T04658
Symbol
tsc1a
Name
(RefSeq) TSC complex subunit 1a isoform X1
KO
K07206
tuberous sclerosis 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04140
Autophagy - animal
ipu04150
mTOR signaling pathway
ipu04218
Cellular senescence
ipu04910
Insulin signaling pathway
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
108255875 (tsc1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108255875 (tsc1a)
09143 Cell growth and death
04218 Cellular senescence
108255875 (tsc1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
108255875 (tsc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108255875 (tsc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hamartin
TolB_like
Motif
Other DBs
NCBI-GeneID:
108255875
NCBI-ProteinID:
XP_017307691
Ensembl:
ENSIPUG00000020658
UniProt:
A0A2D0PNW5
LinkDB
All DBs
Position
22:15831589..15853856
Genome browser
AA seq
1121 aa
AA seq
DB search
MAKDQSNVFDLLPLLESTDLHELEQIRSVLQENLSADKGSVLLNGLVDYYLDTSSPQAVD
LLSSIREPHDKHLLDKMNECMAKPSGRLPTLTLLGHVVRKQPPWIHKIARFPLLTSLLRC
LKTESDVVVLITGVLVLVILLPMIQQTSKQLLFEFFDIFGRLAAWNQRNPGHAQGVYAVH
LHASVYSFFHRLYGMYPCNFVSYLRAHYSMKENVDTFEEIVKPMLEHVRIHPELVTGTKD
YELDPIRWKRFESHDIVIECAKVSLDPKEASCEEGYSFLPDHVPRRLVDSSRSCADLSTH
GSSSFTSMATVRQSLSLSLPHLTVTQHPGLSSQTPKQQGLEAMSSGIKEAMWSPSSTCGM
STPPSSRGMSPTTVSDLSHSASHLLGRVPSTPVDGKWTPSASTPSESSPLLLLSGELEHT
AQPISITLPPPKTNQEIKKGNPTTINGKGSGDGLSTFSLTELSDFVKRTEREKEDDAITA
ELLTLTQGKLDPLPTPAPDLSFSSTTDTPLPLNPSIYNLASTPDRAVNTTKGADQQPSWN
LWPCFTPIENSLSPSAADDVSLELFKGSFPYENLFDLALPKLASLFVERRTAESQQKLAG
REEVEVGDLSATSPLEVLDRLIQQGHDLHETVLKRSPSSSNPLAESHCGGKQHSTKGKGS
GAPDELALLRSQLLLLHNHLLYERHKREQHALRNRRLLRRVINATALEEQNISMKAQLRL
QEVEIQTLRASLQKEQERSKRLQQEGEAQVQQLHSQLQKLQHERNDFCTKTQELQSDLQE
SKKRMGEMEAELQRANNKVCNTGHLLSQLSIKLNNSESLEQQMAFLNKQLLLLGEANKLY
VQEVQHLGPDSHKEQKMLQTCSTRETERLRQSSIQQSQRLEAAQQRITDLETQLTKKEHL
ILEQKKLLENVKNQAKGQLQASENRYLAQKHVTQALQSEMLQLYSQLELASLSNSTPARG
AAEPGSPQNRRPNGSNTSTSAQTSESGKREETSYACVNGELSPLSPGSPPSTALINGSQE
EDLSVLSCNSPLAESFLGMHNQELLKKTKSPYEEEHAHRLHDASSEPAEKRAELTGSQRL
AEEEPDLPPVDRHRARTYNIQRRRQQDLHIMDYNETHQEKT
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaccagtcaaatgtgtttgacctcctcccgcttctggagtccacagatctg
catgagctggagcagatccgaagtgtcttacaggagaaccttagtgcagataaagggtct
gtgcttctcaatggccttgtggattattatctggacaccagctctcctcaggctgtggac
ctcctgtcctccatcagggagcctcacgataagcaccttttagacaagatgaacgagtgc
atggccaagccgagcggcaggctcccgacgctcaccctcctcggccatgttgttcgcaag
cagccaccgtggattcacaagatcgctcgcttccctctgctcacttcactactcagatgc
ctcaagactgagtcagatgttgtggttcttataactggagtgttggtgttagtcatcctg
ctacccatgatacaacagaccagcaaacagctcctgtttgagtttttcgacatcttcgga
cgacttgcagcttggaatcagagaaacccaggccatgctcagggggtgtatgcggttcac
ttgcatgccagcgtgtactccttctttcatcgtctctacggcatgtacccctgcaacttt
gtgtcctatctgcgcgcccattacagcatgaaggagaacgtggacacttttgaggaaata
gttaagccgatgcttgaacatgtgcggatccatccagagcttgtcactggaaccaaagac
tatgaactggacccaatcaggtggaagagatttgagagccatgacattgtgattgaatgt
gccaaagtgtccctggaccctaaggaagcgtcttgtgaggagggctactcgttcctgcct
gaccatgtgccacggcgcctcgtcgacagcagcaggtcctgcgcagatctcagcacacat
ggaagttcatctttcacctcaatggctacagttcgccagtccctttccctttccttaccc
catctgacagtcacgcagcacccaggcctcagttcacagacccccaagcaacagggtctt
gaggcaatgtcctcagggattaaggaggccatgtggagcccttcctctacgtgtgggatg
agcaccccacccagctccagaggaatgtcccccaccaccgtctccgatctctcacacagt
gcctcccacttattagggcgggtcccaagcacaccagtagatgggaagtggactccgtct
gcctccacaccctcagagtcctcccctctcctattgctctcgggggaactcgagcacact
gcccaacccatcagcattactctcccaccccctaagacaaatcaagagattaaaaaaggc
aaccccacaactatcaacggcaaaggttcaggtgatggtcttagtactttctcattgact
gagctctctgactttgtgaagaggacggagagagagaaagaggacgatgccataacagca
gagttgctgacactaacccagggcaaactcgacccgctccccacaccagccccggacttg
tccttctccagcaccactgacacacccctccccttaaaccccagcatttataatctggcc
tccaccccagacagggcagtgaacaccactaaaggagcagatcagcagccttcctggaac
ttgtggccgtgtttcactcccatagagaactccttgagcccttctgcagctgatgacgtc
tccttggagctgtttaagggctcgtttccctacgagaatctcttcgacctggccttgccc
aagttagcctctctgtttgtggagaggaggaccgccgaatctcagcagaagctggctggc
agagaggaggtggaggtgggggatctatctgccacgtcccctctagaggtgctggatcgc
ctcattcagcaaggtcacgaccttcatgaaaccgtgttaaagagatctccttcctcatca
aaccccttggctgagtcacactgtggaggtaaacagcatagcactaaaggaaaaggctca
ggagctccggatgagctggcactgttgcgcagtcagctgctgctcctgcacaaccatctg
ctttatgagaggcataaaagagagcagcacgcactgcgcaaccgccgcctactccgtcgt
gtcatcaacgccactgcgctggaggagcagaacatctccatgaaggcccagctgcggctg
caggaggtggagatccagactctgcgggcgagtctgcagaaagagcaggagcgctccaag
cgtctgcagcaggaaggagaggcacaggtgcagcagctccacagccaactccagaaactc
cagcatgagaggaacgacttctgtaccaaaactcaggagctgcagagtgacttgcaggaa
agtaagaagagaatgggtgagatggaggcggagctgcagagagccaataacaaagtgtgc
aatacaggacacctgctcagccagctgtctatcaagctcaacaacagtgaaagcctggag
caacagatggccttcttgaacaaacagctgttactgctgggcgaagccaataaactgtat
gtgcaggaagtccagcatcttggaccggactcgcataaagagcagaagatgctgcagacg
tgttccacacgagagaccgaacggttgaggcagagctccattcagcagagccagaggctg
gaggcagcccagcaacgcatcaccgacctggagacccagcttaccaagaaagagcacctc
atcctggagcagaagaaactcctggaaaatgtcaaaaatcaggccaaagggcagctacaa
gcttctgagaacaggtatcttgcccaaaagcatgtgactcaggcgttacaatcagaaatg
ctccagctgtatagtcagctcgagctcgccagcctctcaaacagcacaccagcaagagga
gcagctgaaccaggcagccctcaaaaccggaggccaaacggcagcaacacctccacgtcg
gctcaaacctccgagtcagggaaaagagaggaaacttcttacgcgtgtgtgaacggcgag
ctctccccgctgtctcccggatcaccaccatccactgcactgatcaacggcagtcaggaa
gaagacctttctgtcctgtcctgcaactcccctttggccgagagcttcctgggaatgcac
aaccaagagctgctgaagaagacgaagagtccgtatgaggaggagcacgcccaccggctt
catgacgcgagctcggagcctgctgagaaacgcgctgagctcacagggtcccagaggctg
gcagaggaagaacccgacctcccacctgtggatcggcacagggctcgcacttacaacatc
cagaggcgcagacagcaggacctgcacatcatggattacaacgagacccaccaggagaag
acctaa
DBGET
integrated database retrieval system
