Ictalurus punctatus (channel catfish): 108255894
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Entry
108255894 CDS
T04658
Name
(RefSeq) F-box/WD repeat-containing protein 8 isoform X1
KO
K10264
F-box and WD-40 domain protein 8
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108255894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108255894
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108255894
Cul7 complex
Target recognizing subunit
108255894
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
WD40_CDC20-Fz
WD40_WDHD1_1st
F-box
Beta-prop_SCAP
WD40_Prp19
WDR55
Beta-prop_EML_2
EIF3I
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WDR54
Motif
Other DBs
NCBI-GeneID:
108255894
NCBI-ProteinID:
XP_017307728
Ensembl:
ENSIPUG00000019660
UniProt:
A0A2D0PMA8
LinkDB
All DBs
Position
22:16818128..16838162
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AA seq
653 aa
AA seq
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MEDEDELSDFRKRWKHELEKKTRLKDDSDVGYFGHYSKADGINEQRSGHAGESGKKPRDV
EGSKGLQEGCKDQPQYVSIAEGLLDGRSSPLLARMEEERMRRKRRCERGEQQQQQQLLLA
PPRTQRRTQLTLIDQFIHDLNEANEIPFFDIELPYELALKIFQFLNKADLGRCAQVSKSW
RVLAEDEVLWYRLFLEEGYHRGASVSDSPCWKSTLRDCFNTEKTVKYNWKNRVGSVSHLQ
YELGKVLCDVSSCDRLVIAGYTSGDVRLWDTLHWDSGAWNLQPAHSIRDETPPPYVSLVR
VTDAVACAAYENGCVDVWSTESGVEPIHHYEHLQQVCALDLSADAPVVASAAGSEVRVDT
PDARGYWRTVCLTQLAKPVEGVLVVPGKRESPLVSAWAGECVYLLGPNEREEDHEEEEGA
RVLHSVYGQPVTCLDVSACRAAVGVKSCGWGMNDGGNKVRVYSLETGQAELVLGNSAGDF
TCISLRDAPLHLLVCGNKDRRVRVFDLRSGSSVVSLYAHHMGVTAVRADDWKIVSGGGEG
LVCVWEMRMGAKLWEMHNRHPVRHIRFNSSTLVTANIPDEKNPRGACITDDDLTAHRRHR
GVICYYDFSVDLSSQDHVLPICRSDYTETSGYNYNIGLAVPYDALADPRRSGL
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaagacgagctttcggattttcgaaagcggtggaaacacgaactggagaaa
aagactcggttaaaagatgacagtgatgtcggatattttggacactacagtaaagcggat
gggattaatgagcagagaagcggccatgctggtgaatctgggaagaaacccagagatgtt
gaaggctcgaaaggtcttcaggagggctgtaaagatcagccacagtacgtatccatcgca
gagggtctgttggatggaaggagcagccccctgctggccaggatggaggaggagagaatg
cggaggaagcggcgttgtgagcggggagaacaacagcagcagcagcagctcctcttagct
ccaccacgcactcagaggagaactcaacttacactcatcgaccagtttattcacgatttg
aacgaggcgaatgagatccctttctttgacattgagctgccgtatgaactggcgctgaag
attttccagttcttgaacaaagctgatctgggacgatgcgctcaggtgagtaagtcgtgg
agagtgttagcggaggacgaggtcctgtggtacaggttgttcctcgaggaggggtatcac
cgaggggcgagtgtctccgactccccctgctggaaaagcacactgcgagactgctttaac
actgagaaaactgtcaagtacaactggaagaaccgagtcgggtcagtcagccatctgcag
tatgaactaggaaaagtgttgtgtgatgtcagttcctgtgatagactggtcattgctggg
tatacgtccggtgacgtacgactgtgggacacgcttcactgggactcgggtgcttggaat
ctgcagcctgctcacagcatcagagacgagacaccaccgccatacgttagtctggtacga
gtcaccgatgctgtggcctgcgccgcttatgagaacggatgcgtggatgtttggagcact
gaatctggcgtagagcccatccatcactatgagcacctgcagcaggtgtgtgccctcgat
ctgagcgccgatgctccggtcgtggcctctgcggctggctcggaggtgcgagtggacact
ccggacgctcggggctactggaggaccgtgtgtctcacccagttggctaaacctgtggaa
ggggtgttggtggtcccaggaaagcgggagagtccactggtttcagcctgggctggcgag
tgtgtgtatctgctgggtccaaatgagagagaggaagaccatgaggaggaggaaggagcc
agagtgcttcactccgtgtacggccagcccgtcacctgcctggatgtgagcgcatgccga
gctgccgtgggggtgaagagctgcggctggggcatgaacgatggcgggaacaaggttcgg
gtgtacagcctggagaccggccaagcggagctggtgttggggaactcggctggagacttc
acctgcatcagcctgagagatgcccccctgcatctgctggtgtgtggcaacaaagacagg
cgggtgcgagtgtttgacctgcgttccggctcctcggtggtatcgttgtacgcccatcac
atgggcgtgaccgcggtgcgggcggacgactggaagatcgtgagcggcggcggcgaggga
ttggtctgcgtgtgggaaatgaggatgggggcgaaactctgggagatgcacaacaggcac
ccggtccgtcacatacggtttaacagcagcaccctggtgacggccaacatccccgatgaa
aagaacccacgtggagcgtgcatcactgacgatgacctcactgctcaccgcagacaccgg
ggggtgatctgctactacgacttctccgtggatctctcctcgcaggaccacgtgctgccc
atctgcaggtccgactacaccgagacgagcggctacaactacaacatcggcctggccgtg
ccttacgacgcgctcgccgatcctcggagatcaggtctctga
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