Ictalurus punctatus (channel catfish): 108255968
Help
Entry
108255968 CDS
T04658
Symbol
smyd2b
Name
(RefSeq) N-lysine methyltransferase SMYD2-B isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00310
Lysine degradation
ipu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108255968 (smyd2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108255968 (smyd2b)
Enzymes [BR:
ipu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
108255968 (smyd2b)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
108255968 (smyd2b)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108255968 (smyd2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-MYND
SET
TPR_12
TPR_10
TPR_NPHP3
MYND_ZMYND11_ZMYD8
Cytochrom_C550
Motif
Other DBs
NCBI-GeneID:
108255968
NCBI-ProteinID:
XP_017307873
Ensembl:
ENSIPUG00000011020
UniProt:
A0A2D0PMP8
LinkDB
All DBs
Position
2:3076783..3107094
Genome browser
AA seq
451 aa
AA seq
DB search
MIIGHSLLNLRDRDMTADGIDGMERFESPGKGRGLRVTRAYRVGELLFVCPAYSHVLSVS
ERGYTCEHCFARKEGLSKCGKCKKAFYCNVECQRGDWAMHKLECSAMCSFGESWCPSETV
RLVARIISRMQKVPKERSDSEKLLLLKDLEGNLDKLDNEKREMNEADIAELHHFYSKHLD
FPDHQALLTLFAQVHCNGFTVEDEELSHVGSAVFPDVALMNHSCCPNVIVTYRGTSAEVR
AVKDISPGMEVYTSYIDLLYPTEDRMERLRDSYYFTCDCKECKTKSKDKVKLKLRKVNGD
EPRSEEIREMLRYARNAIEDFRRAKQEKTPAELLEICELSMDKMGSMFEDSNVYMLHMMY
QAMGVCMYMEDYDGAVSYGEKVIKPFRQLYPAYSLNVASMYLKLGRLYTVLDRLSAGSAA
LKKALAIMEVVHGKDHVYVKELQKQISTHQK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgataataggtcactcattactgaacctaagggacagggacatgactgcggacggtatt
gacggtatggagcggttcgagagccccggtaaaggcagggggctgcgcgtgaccagagcg
taccgggtgggcgagctgctcttcgtctgccccgcttactcgcacgtgctgtccgtgagc
gagcgcggctacacgtgcgagcactgctttgcgaggaaagagggtctttcgaaatgtgga
aaatgcaagaaagcgttctactgcaacgtggaatgtcagagaggcgactgggcgatgcac
aagctggaatgctcggcgatgtgttcgtttggggagagctggtgtccgtcagagactgtc
cgtctggtggctcggataatcagccgcatgcagaaagttccgaaagagaggagcgactcg
gagaaactgctcttgttaaaagatctggagggcaacctggataagttggataatgagaaa
agggagatgaatgaggcggacatagccgaactgcatcacttctactccaaacatctggac
tttcctgaccaccaggctctgcttactctgtttgctcaggtgcactgtaacggtttcaca
gtggaggacgaggagctctctcacgtcggatcagcggtgtttccagatgtcgcgctgatg
aatcacagctgctgccccaacgtcatcgtcacgtaccgagggacctcagcagaggtgcga
gctgtgaaggatatcagcccgggaatggaggtatacaccagctacatcgacttgctttac
ccaacagaagacagaatggagagactcagggactcgtactacttcacctgcgactgcaaa
gagtgcaaaaccaaatccaaggacaaggtaaaactgaagctgaggaaggtgaacggtgat
gaaccgcgctcagaggagatcagggagatgcttcgctacgcacgaaacgccatcgaagac
ttccgccgcgccaaacaggagaaaacccctgcagagctgctggagatatgtgagctcagt
atggacaaaatgggctccatgttcgaggattccaacgtctacatgctgcacatgatgtac
caggccatgggagtgtgtatgtacatggaggattatgacggcgccgtgagctatggagag
aaagtcataaaaccgttcaggcagctgtatccggcctactccctgaacgtcgcctcgatg
tacctgaagctggggagactgtacacggttctggaccgactctctgcaggatccgctgcc
ctcaaaaaggctttggctattatggaggttgttcatggaaaggaccacgtctacgtaaag
gaactgcaaaaacagatcagcacgcaccaaaaataa
DBGET
integrated database retrieval system
